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      Data Science in the Research Domain Criteria Era: Relevance of Machine Learning to the Study of Stress Pathology, Recovery, and Resilience

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          Abstract

          Diverse environmental and biological systems interact to influence individual differences in response to environmental stress. Understanding the nature of these complex relationships can enhance the development of methods to (1) identify risk, (2) classify individuals as healthy or ill, (3) understand mechanisms of change, and (4) develop effective treatments. The Research Domain Criteria initiative provides a theoretical framework to understand health and illness as the product of multiple interrelated systems but does not provide a framework to characterize or statistically evaluate such complex relationships. Characterizing and statistically evaluating models that integrate multiple levels (e.g. synapses, genes, and environmental factors) as they relate to outcomes that are free from prior diagnostic benchmarks represent a challenge requiring new computational tools that are capable to capture complex relationships and identify clinically relevant populations. In the current review, we will summarize machine learning methods that can achieve these goals.

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          Most cited references58

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          Learning to predict by the methods of temporal differences

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            A framework for mesencephalic dopamine systems based on predictive Hebbian learning.

            We develop a theoretical framework that shows how mesencephalic dopamine systems could distribute to their targets a signal that represents information about future expectations. In particular, we show how activity in the cerebral cortex can make predictions about future receipt of reward and how fluctuations in the activity levels of neurons in diffuse dopamine systems above and below baseline levels would represent errors in these predictions that are delivered to cortical and subcortical targets. We present a model for how such errors could be constructed in a real brain that is consistent with physiological results for a subset of dopaminergic neurons located in the ventral tegmental area and surrounding dopaminergic neurons. The theory also makes testable predictions about human choice behavior on a simple decision-making task. Furthermore, we show that, through a simple influence on synaptic plasticity, fluctuations in dopamine release can act to change the predictions in an appropriate manner.
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              Post-traumatic stress disorder.

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                Author and article information

                Journal
                Chronic Stress (Thousand Oaks)
                Chronic Stress (Thousand Oaks)
                CSS
                spcss
                Chronic Stress
                SAGE Publications (Sage CA: Los Angeles, CA )
                2470-5470
                10 January 2018
                Jan-Dec 2018
                : 2
                : 2470547017747553
                Affiliations
                [1 ]Ringgold 12228, universityNYU School of Medicine; , Department of Psychiatry, New York, NY, USA
                [2 ]Mindstrong Health, California, CA, USA
                [3 ]Ringgold 12228, universityNYU School of Medicine; , Department of Medicine, New York, NY, USA
                [4 ]Ringgold 12228, universityNYU School of Medicine; , Department of Neuroscience and Physiology, New York, NY, USA
                Author notes
                [*]Isaac R. Galatzer-Levy, NYU School of Medicine, 1 Park Avenue, New York, NY 10016, USA. Email: isaac.galatzer-levy@ 123456nyumc.org
                Article
                10.1177_2470547017747553
                10.1177/2470547017747553
                5841258
                29527592
                df477ad8-4dce-4c4f-95c8-ffb0e3394e86
                © The Author(s) 2018

                Creative Commons Non Commercial CC BY-NC: This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License ( http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages ( https://us.sagepub.com/en-us/nam/open-access-at-sage).

                History
                : 10 August 2017
                : 15 October 2017
                : 13 November 2017
                Funding
                Funded by: National Institute of Mental Health, FundRef https://doi.org/10.13039/100000025;
                Award ID: K01MH102415
                Funded by: National Institute of Neurological Disorders and Stroke, FundRef https://doi.org/10.13039/100000065;
                Award ID: R01-NS100065
                Categories
                Review
                Custom metadata
                January-December 2018

                machine learning,stress,research domain criteria,computational psychiatry,stress pathology,data science,resilience

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