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      Solid-phase synthesis of cyclic peptide chitinase inhibitors: SAR of the argifin scaffold†

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          Abstract

          An efficient, all-solid-phase synthesis of argifin, a cyclic peptide chitinase inhibitor with chemotherapeutic potential, is described.

          Abstract

          A new, highly efficient, all-solid-phase synthesis of argifin, a natural product cyclic pentapeptide chitinase inhibitor, is reported. The synthesis features attachment of an orthogonally protected Asp residue to the solid support and assembly of the linear peptide chain by Fmoc SPPS prior to cyclisation and side-chain manipulation on-resin. Introduction of the key N-methyl carbamoyl-substituted Arg side chain is achieved via derivatisation of a selectively protected Orn residue, prior to cleavage from the resin and side-chain deprotection. A severe aspartimide side-reaction observed upon final deprotection is circumvented by the use of a novel aqueous acidolysis procedure. The flexibility of the synthesis is demonstrated by the preparation of a series of argifin analogues designed from the X-ray structure of the natural product in complex with a representative family 18 chitinase.

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          Most cited references30

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          The cell wall: a carbohydrate armour for the fungal cell.

          The cell wall is composed of a polysaccharide-based three-dimensional network. Considered for a long time as an inert exoskeleton, the cell wall is now seen as a dynamic structure that is continuously changing as a result of the modification of culture conditions and environmental stresses. Although the cell wall composition varies among fungal species, chemogenomic comparative analysis have led to a better understanding of the genes and mechanisms involved in the construction of the common central core composed of branched beta1,3 glucan-chitin. Because of its essential biological role, unique biochemistry and structural organization and the absence in mammalian cells of most of its constitutive components, the cell wall is an attractive target for the development of new antifungal agents. Genomic as well as drug studies have shown that the death of the fungus can result from inhibition of cell wall polysaccharide synthases. To date, only beta1,3 glucan synthase inhibitors have been launched clinically and many more targets remain to be explored.
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            Identification of a novel acidic mammalian chitinase distinct from chitotriosidase.

            Chitinases are ubiquitous chitin-fragmenting hydrolases. Recently we discovered the first human chitinase, named chitotriosidase, that is specifically expressed by phagocytes. We here report the identification, purification, and subsequent cloning of a second mammalian chitinase. This enzyme is characterized by an acidic isoelectric point and therefore named acidic mammalian chitinase (AMCase). In rodents and man the enzyme is relatively abundant in the gastrointestinal tract and is found to a lesser extent in the lung. Like chitotriosidase, AMCase is synthesized as a 50-kDa protein containing a 39-kDa N-terminal catalytic domain, a hinge region, and a C-terminal chitin-binding domain. In contrast to chitotriosidase, the enzyme is extremely acid stable and shows a distinct second pH optimum around pH 2. AMCase is capable of cleaving artificial chitin-like substrates as well as crab shell chitin and chitin as present in the fungal cell wall. Our study has revealed the existence of a chitinolytic enzyme in the gastrointestinal tract and lung that may play a role in digestion and/or defense.
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              Synthesis and Biological Activity of Natural Aminocyclopentitol Glycosidase Inhibitors: Mannostatins, Trehazolin, Allosamidins, and Their Analogues.

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                Author and article information

                Journal
                Org Biomol Chem
                Organic & Biomolecular Chemistry
                Royal Society of Chemistry
                1477-0520
                1477-0539
                21 January 2009
                13 November 2008
                : 7
                : 2
                : 259-268
                Affiliations
                [a ] Wolfson Laboratory of Medicinal Chemistry, Department of Pharmacy and Pharmacology, University of Bath, , Claverton Down, Bath, BA2 7AY, UK. Email: ie203@ 123456bath.ac.uk ; Fax: ++ 44 01225 386114
                [b ] Division of Molecular and Environmental Microbiology, University of Dundee, Dundee, DD1 5EH, UK
                Article
                b815077j
                10.1039/b815077j
                2657367
                19109670
                b8b4d762-2bcd-4228-9723-0065669d76f2
                This journal is © The Royal Society of Chemistry 2008

                This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/2.0/uk/) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 29 August 2008
                : 6 October 2008
                Categories
                Chemistry

                Notes

                †Electronic supplementary information (ESI) available: ES-MS data for compounds 10a and 10b. See DOI: 10.1039/b815077j


                Organic & Biomolecular chemistry
                Organic & Biomolecular chemistry

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