5
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Biomolecular interactions of ultrasmall metallic nanoparticles and nanoclusters†

      review-article
      , ,
      Nanoscale Advances
      RSC

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          The use of nanoparticles (NPs) in biomedicine has made a gradual transition from proof-of-concept to clinical applications, with several NP types meeting regulatory approval or undergoing clinical trials. A new type of metallic nanostructures called ultrasmall nanoparticles (usNPs) and nanoclusters (NCs), while retaining essential properties of the larger (classical) NPs, have features common to bioactive proteins. This combination expands the potential use of usNPs and NCs to areas of diagnosis and therapy traditionally reserved for small-molecule medicine. Their distinctive physicochemical properties can lead to unique in vivo behaviors, including improved renal clearance and tumor distribution. Both the beneficial and potentially deleterious outcomes (cytotoxicity, inflammation) can, in principle, be controlled through a judicious choice of the nanocore shape and size, as well as the chemical ligands attached to the surface. At present, the ability to control the behavior of usNPs is limited, partly because advances are still needed in nanoengineering and chemical synthesis to manufacture and characterize ultrasmall nanostructures and partly because our understanding of their interactions in biological environments is incomplete. This review addresses the second limitation. We review experimental and computational methods currently available to understand molecular mechanisms, with particular attention to usNP–protein complexation, and highlight areas where further progress is needed. We discuss approaches that we find most promising to provide relevant molecular-level insight for designing usNPs with specific behaviors and pave the way to translational applications.

          Abstract

          Experimental and computational methods for the study of ultrasmall nanoparticle–protein interactions.

          Related collections

          Most cited references328

          • Record: found
          • Abstract: found
          • Article: not found

          CHARMM36m: an improved force field for folded and intrinsically disordered proteins

          An all-atom protein force field, CHARMM36m, offers improved accuracy for simulating intrinsically disordered peptides and proteins.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            CHARMM: the biomolecular simulation program.

            CHARMM (Chemistry at HARvard Molecular Mechanics) is a highly versatile and widely used molecular simulation program. It has been developed over the last three decades with a primary focus on molecules of biological interest, including proteins, peptides, lipids, nucleic acids, carbohydrates, and small molecule ligands, as they occur in solution, crystals, and membrane environments. For the study of such systems, the program provides a large suite of computational tools that include numerous conformational and path sampling methods, free energy estimators, molecular minimization, dynamics, and analysis techniques, and model-building capabilities. The CHARMM program is applicable to problems involving a much broader class of many-particle systems. Calculations with CHARMM can be performed using a number of different energy functions and models, from mixed quantum mechanical-molecular mechanical force fields, to all-atom classical potential energy functions with explicit solvent and various boundary conditions, to implicit solvent and membrane models. The program has been ported to numerous platforms in both serial and parallel architectures. This article provides an overview of the program as it exists today with an emphasis on developments since the publication of the original CHARMM article in 1983. Copyright 2009 Wiley Periodicals, Inc.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Understanding biophysicochemical interactions at the nano-bio interface.

              Rapid growth in nanotechnology is increasing the likelihood of engineered nanomaterials coming into contact with humans and the environment. Nanoparticles interacting with proteins, membranes, cells, DNA and organelles establish a series of nanoparticle/biological interfaces that depend on colloidal forces as well as dynamic biophysicochemical interactions. These interactions lead to the formation of protein coronas, particle wrapping, intracellular uptake and biocatalytic processes that could have biocompatible or bioadverse outcomes. For their part, the biomolecules may induce phase transformations, free energy releases, restructuring and dissolution at the nanomaterial surface. Probing these various interfaces allows the development of predictive relationships between structure and activity that are determined by nanomaterial properties such as size, shape, surface chemistry, roughness and surface coatings. This knowledge is important from the perspective of safe use of nanomaterials.
                Bookmark

                Author and article information

                Journal
                Nanoscale Adv
                Nanoscale Adv
                NA
                NAADAI
                Nanoscale Advances
                RSC
                2516-0230
                28 April 2021
                1 June 2021
                28 April 2021
                : 3
                : 11
                : 2995-3027
                Affiliations
                [a] Department of Biochemistry, Federal University of São Paulo São Paulo SP 04044 Brazil alioscka.sousa@ 123456unifesp.br
                [b] National Institute of Biomedical Imaging and Bioengineering, NIH Bethesda MD 20892 USA
                [c] BCBB, National Institute of Allergy and Infectious Diseases, NIH Bethesda MD 20892 USA hassan@ 123456mail.nih.gov
                Author information
                https://orcid.org/0000-0001-7443-5363
                https://orcid.org/0000-0002-8859-6966
                https://orcid.org/0000-0003-3319-078X
                Article
                d1na00086a
                10.1039/d1na00086a
                8168927
                34124577
                7ebcc2ed-3132-4ced-b204-040b2438c9f5
                This journal is © The Royal Society of Chemistry
                History
                : 3 February 2021
                : 16 April 2021
                Page count
                Pages: 33
                Funding
                Funded by: National Institute of Biomedical Imaging and Bioengineering, doi 10.13039/100000070;
                Award ID: Unassigned
                Funded by: Division of Intramural Research, National Institute of Allergy and Infectious Diseases, doi 10.13039/100006492;
                Award ID: Unassigned
                Funded by: Fundação de Amparo à Pesquisa do Estado de São Paulo, doi 10.13039/501100001807;
                Award ID: 19/04372-6
                Funded by: National Institute of Allergy and Infectious Diseases, doi 10.13039/100000060;
                Award ID: Unassigned
                Categories
                Chemistry
                Custom metadata
                Paginated Article

                Comments

                Comment on this article