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      Genetic and antigenic characterization of an atypical pestivirus isolate, a putative member of a novel pestivirus species.

      The Journal of General Virology
      3' Untranslated Regions, chemistry, 5' Untranslated Regions, Animals, Base Sequence, Cattle, Fetal Blood, virology, Molecular Sequence Data, Pestivirus, classification, genetics, immunology, Phylogeny

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          Abstract

          The genus Pestivirus within the family Flaviviridae currently consists of four different main species: Classical swine fever virus, Bovine viral diarrhea virus types 1 and 2 and Border disease virus. A fifth tentative species is represented by an isolate from a giraffe. In this study, a completely new pestivirus, isolated from a batch of fetal calf serum that was collected in Brazil, is described. It is proposed that the isolate D32/00_'HoBi' may constitute a novel sixth pestivirus species, because it is genetically, as well as antigenically, markedly different from all other pestiviruses. Based on the entire N(pro)- and E2-encoding sequences, identities of <70 % to all other pestivirus species were determined. Similarly, cross-neutralization and binding studies using antisera and mAbs revealed marked antigenic differences between D32/00_'HoBi' and all other pestiviruses.

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