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      Chromatin regulation by Brg1 underlies heart muscle development and disease

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          SUMMARY

          Cardiac hypertrophy and failure are characterized by transcriptional reprogramming of gene expression. Adult cardiomyocytes in mice express primarily α-myosin heavy chain ( α-MHC), whereas embryonic cardiomyocytes express β-MHC. Cardiac stress triggers adult hearts to undergo hypertrophy and a shift from α-MHC to fetal β-MHC expression. Here we show that Brg1, a chromatin-remodeling protein, plays critical roles in regulating cardiac growth, differentiation and gene expression. In embryos, Brg1 promotes myocyte proliferation by maintaining BMP10 and suppressing p57 kip2 expression. It preserves fetal cardiac differentiation by interacting with HDAC and PARP to repress α-MHC and activate β-MHC. In adults, Brg1 is turned off in cardiomyocytes. It is reactivated by cardiac stresses and complexes with its embryonic partners, HDAC and PARP, to induce a pathological α- to β-MHC shift. Preventing Brg1 re-expression decreases hypertrophy and reverses such MHC switch. Brg1 is activated in certain patients with hypertrophic cardiomyopathy, its level correlating with disease severity and MHC changes. Our studies show that Brg1 maintains cardiomyocytes in an embryonic state, and demonstrate an epigenetic mechanism by which three classes of chromatin-modifying factors, Brg1, HDAC and PARP, cooperate to control developmental and pathological gene expression.

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          Most cited references31

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          Poly(ADP-ribose): novel functions for an old molecule.

          The addition to proteins of the negatively charged polymer of ADP-ribose (PAR), which is synthesized by PAR polymerases (PARPs) from NAD(+), is a unique post-translational modification. It regulates not only cell survival and cell-death programmes, but also an increasing number of other biological functions with which novel members of the PARP family have been associated. These functions include transcriptional regulation, telomere cohesion and mitotic spindle formation during cell division, intracellular trafficking and energy metabolism.
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            Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes.

            Histone acetyltransferases (HATs) and deacetylases (HDACs) function antagonistically to control histone acetylation. As acetylation is a histone mark for active transcription, HATs have been associated with active and HDACs with inactive genes. We describe here genome-wide mapping of HATs and HDACs binding on chromatin and find that both are found at active genes with acetylated histones. Our data provide evidence that HATs and HDACs are both targeted to transcribed regions of active genes by phosphorylated RNA Pol II. Furthermore, the majority of HDACs in the human genome function to reset chromatin by removing acetylation at active genes. Inactive genes that are primed by MLL-mediated histone H3K4 methylation are subject to a dynamic cycle of acetylation and deacetylation by transient HAT/HDAC binding, preventing Pol II from binding to these genes but poising them for future activation. Silent genes without any H3K4 methylation signal show no evidence of being bound by HDACs.
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              Chromatin remodelling during development.

              New methods for the genome-wide analysis of chromatin are providing insight into its roles in development and their underlying mechanisms. Current studies indicate that chromatin is dynamic, with its structure and its histone modifications undergoing global changes during transitions in development and in response to extracellular cues. In addition to DNA methylation and histone modification, ATP-dependent enzymes that remodel chromatin are important controllers of chromatin structure and assembly, and are major contributors to the dynamic nature of chromatin. Evidence is emerging that these chromatin-remodelling enzymes have instructive and programmatic roles during development. Particularly intriguing are the findings that specialized assemblies of ATP-dependent remodellers are essential for establishing and maintaining pluripotent and multipotent states in cells.
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                Author and article information

                Journal
                0410462
                6011
                Nature
                Nature
                0028-0836
                1476-4687
                21 May 2010
                1 July 2010
                1 January 2011
                : 466
                : 7302
                : 62-67
                Affiliations
                [1 ]Division of Cardiovascular Medicine, Department of Medicine, Stanford University School of Medicine, Stanford, CA 94305
                [2 ]Albert Einstein College of Medicine, Department of Genetics, Bronx, NY 10461 USA
                Author notes
                [+]

                These authors contribute equally to this work.

                [* ]Author for correspondence: Ching-Pin Chang, M.D., Ph.D. CCSR Building, Room 3115-C 269 Campus Drive Stanford, CA 94305-5169 Office: 650-736-8539 Fax: 650-723-6903 chingpin@ 123456stanford.edu

                Author Contributions

                C.P.C. and C.T.H. are responsible for the original concept and design of primary experiments. C.T.H conducted most experiments. P.H., J.Y., H.L.C. contributed equally to this work, and the order of authorship does not reflect their relative contributions. P.H. defined PARP1 and Brg1 interactions, and HDAC binding to MHC. J.Y. contributed to gene expression, hypertrophy and chromatin studies. H.L.C. developed the TAC procedure and studied cardiac hypertrophy. C.S. generated mouse founders and purified antibodies. E.A. collected clinical heart tissues. B.Z. generated Tnnt2-rtTA;Tre-Cre mice. C.T.H. and C.P.C. prepared the manuscript with contributions from P.H., J.Y., H.L.C., C.S., E.A., and B.Z.

                Article
                nihpa199832
                10.1038/nature09130
                2898892
                20596014
                4bc9bef3-4799-41f2-8d99-6b8c60fa9a4d

                Users may view, print, copy, download and text and data- mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use: http://www.nature.com/authors/editorial_policies/license.html#terms

                History
                Funding
                Funded by: National Heart, Lung, and Blood Institute : NHLBI
                Award ID: R01 HL085345-04 ||HL
                Funded by: National Heart, Lung, and Blood Institute : NHLBI
                Award ID: R01 HL085345-03S1 ||HL
                Categories
                Article

                Uncategorized
                mhc,brg1,heart development,chromatin,proliferation,parp,heart failure,cardiac hypertrophy,cardiomyopathy,p57kip2,baf,bmp10,hdac,myosin heavy chain,differentiation

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