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      The skeletal muscle proteomic determinants of neuromuscular function in young and older women following 8 weeks of resistance training

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          Abstract

          Resistance training (RT) is the gold standard intervention for ameliorating sarcopenia. Outstanding mechanistic questions remain regarding the malleability of the molecular determinants of skeletal muscle function in older age. Discovery of proteomics can expand such knowledge. We aimed to compare the effect of RT on the skeletal muscle proteome and neuromuscular function (NMF) in older and younger women. Seven young (22 ± 6 years) and eight older (63 ± 5 years) women completed 8 weeks’ leg RT. Pre‐ and post‐training, measures of leg and handgrip strength, NMF and vastus lateralis (VL) biopsies were obtained. Tandem‐mass‐tagged skeletal muscle proteomic analyses were performed. Data were analysed using differential expression and weighted gene co‐expression network approaches. Proteins related to skeletal muscle contraction were lower in older skeletal muscle; this was not normalised by RT. Following RT, older women had higher expression of VL mitochondrial biogenesis proteins compared to the young, a reversal of pre‐training observations. Seventy proteins were differentially expressed between age groups. VL expression of these proteins in older women was consistently and significantly associated with poorer leg strength/NMF. Conversely, VL expression of these proteins in older women was often associated with greater handgrip strength. This study has identified important differences in the molecular responses of young and old skeletal muscle to RT. We have demonstrated their close relationship with skeletal muscle function. Proteins that are refractory to RT may represent targets to ameliorate sarcopenia. We have described a ‘proteomic‐function’ relationship that appears to be muscle‐specific. Future research should further unpick these complex relationships.

          Abstract

          • What is the central question of this study?

            How does lower limb RT affect the skeletal muscle proteome and NMF in older versus younger women?

          • What is the main finding and its importance?

            RT increased proteins related to mitochondrial biogenesis in older women, reversing pre‐training deficits, but did not normalise expression of proteins related to skeletal muscle contraction and the extracellular matrix. Individual proteins were identified within this aged proteome that are associated with poorer leg strength and NMF. Some appear to be training resistant.

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          Most cited references76

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          Sarcopenia: revised European consensus on definition and diagnosis

          Abstract Background in 2010, the European Working Group on Sarcopenia in Older People (EWGSOP) published a sarcopenia definition that aimed to foster advances in identifying and caring for people with sarcopenia. In early 2018, the Working Group met again (EWGSOP2) to update the original definition in order to reflect scientific and clinical evidence that has built over the last decade. This paper presents our updated findings. Objectives to increase consistency of research design, clinical diagnoses and ultimately, care for people with sarcopenia. Recommendations sarcopenia is a muscle disease (muscle failure) rooted in adverse muscle changes that accrue across a lifetime; sarcopenia is common among adults of older age but can also occur earlier in life. In this updated consensus paper on sarcopenia, EWGSOP2: (1) focuses on low muscle strength as a key characteristic of sarcopenia, uses detection of low muscle quantity and quality to confirm the sarcopenia diagnosis, and identifies poor physical performance as indicative of severe sarcopenia; (2) updates the clinical algorithm that can be used for sarcopenia case-finding, diagnosis and confirmation, and severity determination and (3) provides clear cut-off points for measurements of variables that identify and characterise sarcopenia. Conclusions EWGSOP2's updated recommendations aim to increase awareness of sarcopenia and its risk. With these new recommendations, EWGSOP2 calls for healthcare professionals who treat patients at risk for sarcopenia to take actions that will promote early detection and treatment. We also encourage more research in the field of sarcopenia in order to prevent or delay adverse health outcomes that incur a heavy burden for patients and healthcare systems.
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            KEGG for taxonomy-based analysis of pathways and genomes

            KEGG ( https://www.kegg.jp ) is a manually curated database resource integrating various biological objects categorized into systems, genomic, chemical and health information. Each object (database entry) is identified by the KEGG identifier (kid), which generally takes the form of a prefix followed by a five-digit number, and can be retrieved by appending /entry/kid in the URL. The KEGG pathway map viewer, the Brite hierarchy viewer and the newly released KEGG genome browser can be launched by appending /pathway/kid, /brite/kid and /genome/kid, respectively, in the URL. Together with an improved annotation procedure for KO (KEGG Orthology) assignment, an increasing number of eukaryotic genomes have been included in KEGG for better representation of organisms in the taxonomic tree. Multiple taxonomy files are generated for classification of KEGG organisms and viruses, and the Brite hierarchy viewer is used for taxonomy mapping, a variant of Brite mapping in the new KEGG Mapper suite. The taxonomy mapping enables analysis of, for example, how functional links of genes in the pathway and physical links of genes on the chromosome are conserved among organism groups.
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              DAVID: a web server for functional enrichment analysis and functional annotation of gene lists (2021 update).

              DAVID is a popular bioinformatics resource system including a web server and web service for functional annotation and enrichment analyses of gene lists. It consists of a comprehensive knowledgebase and a set of functional analysis tools. Here, we report all updates made in 2021. The DAVID Gene system was rebuilt to gain coverage of more organisms, which increased the taxonomy coverage from 17 399 to 55 464. All existing annotation types have been updated, if available, based on the new DAVID Gene system. Compared with the last version, the number of gene-term records for most annotation types within the updated Knowledgebase have significantly increased. Moreover, we have incorporated new annotations in the Knowledgebase including small molecule-gene interactions from PubChem, drug-gene interactions from DrugBank, tissue expression information from the Human Protein Atlas, disease information from DisGeNET, and pathways from WikiPathways and PathBank. Eight of ten subgroups split from Uniprot Keyword annotation were assigned to specific types. Finally, we added a species parameter for uploading a list of gene symbols to minimize the ambiguity between species, which increases the efficiency of the list upload and eliminates confusion for users. These current updates have significantly expanded the Knowledgebase and enhanced the discovery power of DAVID.
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                Author and article information

                Contributors
                m.oleary@exeter.ac.uk
                Journal
                Exp Physiol
                Exp Physiol
                10.1111/(ISSN)1469-445X
                EPH
                expphysiol
                Experimental Physiology
                John Wiley and Sons Inc. (Hoboken )
                0958-0670
                1469-445X
                11 December 2024
                March 2025
                : 110
                : 3 ( doiID: 10.1113/eph.v110.3 )
                : 438-453
                Affiliations
                [ 1 ] Faculty of Health and Life Sciences, Department of Public Health and Sport Sciences University of Exeter Exeter Devon UK
                [ 2 ] School of Sport, Exercise and Rehabilitation Sciences University of Birmingham Edgbaston Birmingham UK
                Author notes
                [*] [* ] Correspondence

                Mary O'Leary, Faculty of Health and Life Sciences, Department of Public Health and Sport Sciences, University of Exeter, Exeter, UK.

                Email: m.oleary@ 123456exeter.ac.uk

                Author information
                https://orcid.org/0000-0003-1845-9568
                Article
                EPH13710
                10.1113/EP092328
                11868017
                39663727
                231e304b-9a4d-41eb-9bd1-3c2006a75258
                © 2024 The Author(s). Experimental Physiology published by John Wiley & Sons Ltd on behalf of The Physiological Society. This is an open access article under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 27 September 2024
                : 05 November 2024
                Page count
                Figures: 5, Tables: 1, Pages: 16, Words: 12553
                Categories
                Research Article
                Research Article
                Environmental and Exercise
                Custom metadata
                2.0
                1 March 2025
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.5.4 mode:remove_FC converted:28.02.2025

                Anatomy & Physiology
                exercise,proteomics,resistance training,skeletal muscle,strength
                Anatomy & Physiology
                exercise, proteomics, resistance training, skeletal muscle, strength

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