0
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      In silico prediction, characterization and molecular docking studies on Glutathione-S-transferase as a molecular sieve for toxic agrochemicals explored in survey of North Indian farmers

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          All across the globe, India is considered as an agricultural nation because its agro products drive the economy. An increase in population growth and a hike in food demands lead to the use of hazardous chemicals in farm fields. An in-depth field survey in Northern India was conducted to understand the types of agrochemicals that were used, farmers' knowledge about their safe handling, and their practices on its usage. Ninety-two responders (primarily farmers) from 37 districts of 12 states were interviewed to collect the information. The library containing 58 compounds as toxic spray constituents were developed and further screened in-silico for ADMET, drug-likeness, toxicity prediction, and molecular docking against their target actions in the human system. Glutathione S-transferases (GSTs) was selected as target protein showing the best-docked score with Bordeaux, Indoxacarb, Cyphenothrin, Deltamethrin, and Beta-cyfluthrin. The study revealed various adverse effects on human health and advocated provisions of alternative solutions such as using GST as a binding agents to hold the toxic chemicals out of living system and eventually saves valuable lives of the farmers.

          Abstract

          Glutathione Transferase, Bordeaux mixture, Indoxacarb, Agrochemical, Molecular docking

          Related collections

          Most cited references43

          • Record: found
          • Abstract: found
          • Article: not found

          PubChem Substance and Compound databases

          PubChem (https://pubchem.ncbi.nlm.nih.gov) is a public repository for information on chemical substances and their biological activities, launched in 2004 as a component of the Molecular Libraries Roadmap Initiatives of the US National Institutes of Health (NIH). For the past 11 years, PubChem has grown to a sizable system, serving as a chemical information resource for the scientific research community. PubChem consists of three inter-linked databases, Substance, Compound and BioAssay. The Substance database contains chemical information deposited by individual data contributors to PubChem, and the Compound database stores unique chemical structures extracted from the Substance database. Biological activity data of chemical substances tested in assay experiments are contained in the BioAssay database. This paper provides an overview of the PubChem Substance and Compound databases, including data sources and contents, data organization, data submission using PubChem Upload, chemical structure standardization, web-based interfaces for textual and non-textual searches, and programmatic access. It also gives a brief description of PubChem3D, a resource derived from theoretical three-dimensional structures of compounds in PubChem, as well as PubChemRDF, Resource Description Framework (RDF)-formatted PubChem data for data sharing, analysis and integration with information contained in other databases.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            PubChem 2019 update: improved access to chemical data

            Abstract PubChem (https://pubchem.ncbi.nlm.nih.gov) is a key chemical information resource for the biomedical research community. Substantial improvements were made in the past few years. New data content was added, including spectral information, scientific articles mentioning chemicals, and information for food and agricultural chemicals. PubChem released new web interfaces, such as PubChem Target View page, Sources page, Bioactivity dyad pages and Patent View page. PubChem also released a major update to PubChem Widgets and introduced a new programmatic access interface, called PUG-View. This paper describes these new developments in PubChem.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: found
              Is Open Access

              Pesticide Exposure, Safety Issues, and Risk Assessment Indicators

              Pesticides are widely used in agricultural production to prevent or control pests, diseases, weeds, and other plant pathogens in an effort to reduce or eliminate yield losses and maintain high product quality. Although pesticides are developed through very strict regulation processes to function with reasonable certainty and minimal impact on human health and the environment, serious concerns have been raised about health risks resulting from occupational exposure and from residues in food and drinking water. Occupational exposure to pesticides often occurs in the case of agricultural workers in open fields and greenhouses, workers in the pesticide industry, and exterminators of house pests. Exposure of the general population to pesticides occurs primarily through eating food and drinking water contaminated with pesticide residues, whereas substantial exposure can also occur in or around the home. Regarding the adverse effects on the environment (water, soil and air contamination from leaching, runoff, and spray drift, as well as the detrimental effects on wildlife, fish, plants, and other non-target organisms), many of these effects depend on the toxicity of the pesticide, the measures taken during its application, the dosage applied, the adsorption on soil colloids, the weather conditions prevailing after application, and how long the pesticide persists in the environment. Therefore, the risk assessment of the impact of pesticides either on human health or on the environment is not an easy and particularly accurate process because of differences in the periods and levels of exposure, the types of pesticides used (regarding toxicity and persistence), and the environmental characteristics of the areas where pesticides are usually applied. Also, the number of the criteria used and the method of their implementation to assess the adverse effects of pesticides on human health could affect risk assessment and would possibly affect the characterization of the already approved pesticides and the approval of the new compounds in the near future. Thus, new tools or techniques with greater reliability than those already existing are needed to predict the potential hazards of pesticides and thus contribute to reduction of the adverse effects on human health and the environment. On the other hand, the implementation of alternative cropping systems that are less dependent on pesticides, the development of new pesticides with novel modes of action and improved safety profiles, and the improvement of the already used pesticide formulations towards safer formulations (e.g., microcapsule suspensions) could reduce the adverse effects of farming and particularly the toxic effects of pesticides. In addition, the use of appropriate and well-maintained spraying equipment along with taking all precautions that are required in all stages of pesticide handling could minimize human exposure to pesticides and their potential adverse effects on the environment.
                Bookmark

                Author and article information

                Contributors
                Journal
                Heliyon
                Heliyon
                Heliyon
                Elsevier
                2405-8440
                26 August 2021
                September 2021
                26 August 2021
                : 7
                : 9
                : e07875
                Affiliations
                [a ]Department of Biosciences and Bioengineering, Indian Institute of Technology Bombay, Powai, Mumbai, Maharashtra, 400076, India
                [b ]Department of Biotechnology, Ambala College of Engineering and Applied Research, Devsthali Ambala, Kurukshetra University, Kurukshetra, Haryana, 133101, India
                [c ]Department of Chemistry, JAV College, CCS University, Meerut, Uttar Pradesh, 250611, India
                [d ]Department of Biotechnology, Jamia Millia Islamia University, Okhla, Delhi, 110025, India
                [e ]Department of Biotechnology, St. Thomas College, Ruabandha Bhilai, Hemachand Yadav University, Chattisgarh, 490009, India
                [f ]Department of Biotechnology, Gauhati University, Guwahati, Assam, 781030, India
                [g ]Department of Chemistry, Central University of Haryana, Jant-Pali, Mahendragarh, Haryana, 123031, India
                [h ]Bioinformatics and Data Management, ICMR - National Institute of Virology, Pune, India
                [i ]Dept of Botany, Shri Shivaji Science College, Amravati, Sant Gadgebaba Amravati University, Amravati, India
                Author notes
                []Corresponding author. sonudin@ 123456gmail.com
                Article
                S2405-8440(21)01978-2 e07875
                10.1016/j.heliyon.2021.e07875
                8417331
                1fedb1c2-c758-4102-9fdc-d215d5664ea9
                © 2021 The Author(s)

                This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

                History
                : 14 April 2021
                : 15 April 2021
                : 23 August 2021
                Categories
                Research Article

                glutathione transferase,bordeaux mixture,indoxacarb,agrochemical,molecular docking

                Comments

                Comment on this article