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      Nitrous oxide emissions from soils: how well do we understand the processes and their controls?

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          Abstract

          Although it is well established that soils are the dominating source for atmospheric nitrous oxide (N 2O), we are still struggling to fully understand the complexity of the underlying microbial production and consumption processes and the links to biotic (e.g. inter- and intraspecies competition, food webs, plant–microbe interaction) and abiotic (e.g. soil climate, physics and chemistry) factors. Recent work shows that a better understanding of the composition and diversity of the microbial community across a variety of soils in different climates and under different land use, as well as plant–microbe interactions in the rhizosphere, may provide a key to better understand the variability of N 2O fluxes at the soil–atmosphere interface. Moreover, recent insights into the regulation of the reduction of N 2O to dinitrogen (N 2) have increased our understanding of N 2O exchange. This improved process understanding, building on the increased use of isotope tracing techniques and metagenomics, needs to go along with improvements in measurement techniques for N 2O (and N 2) emission in order to obtain robust field and laboratory datasets for different ecosystem types. Advances in both fields are currently used to improve process descriptions in biogeochemical models, which may eventually be used not only to test our current process understanding from the microsite to the field level, but also used as tools for up-scaling emissions to landscapes and regions and to explore feedbacks of soil N 2O emissions to changes in environmental conditions, land management and land use.

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          Nitrogen Saturation in Northern Forest Ecosystems

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            Nitrososphaera viennensis, an ammonia oxidizing archaeon from soil.

            Genes of archaea encoding homologues of ammonia monooxygenases have been found on a widespread basis and in large amounts in almost all terrestrial and marine environments, indicating that ammonia oxidizing archaea (AOA) might play a major role in nitrification on Earth. However, only one pure isolate of this group from a marine environment has so far been obtained, demonstrating archaeal ammonia oxidation coupled with autotrophic growth similar to the bacterial counterparts. Here we describe the cultivation and isolation of an AOA from soil. It grows on ammonia or urea as an energy source and is capable of using higher ammonia concentrations than the marine isolate, Nitrosopumilus maritimus. Surprisingly, although it is able to grow chemolithoautotrophically, considerable growth rates of this strain are obtained only upon addition of low amounts of pyruvate or when grown in coculture with bacteria. Our findings expand the recognized metabolic spectrum of AOA and help explain controversial results obtained in the past on the activity and carbon assimilation of these globally distributed organisms.
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              Reappraisal of drying and wetting effects on C and N mineralization and fluxes in soils

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                Author and article information

                Journal
                Philos Trans R Soc Lond B Biol Sci
                Philos. Trans. R. Soc. Lond., B, Biol. Sci
                RSTB
                royptb
                Philosophical Transactions of the Royal Society B: Biological Sciences
                The Royal Society
                0962-8436
                1471-2970
                5 July 2013
                5 July 2013
                : 368
                : 1621 , Discussion Meeting Issue 'The global nitrogen cycle in the twenty-first century' organised and edited by David Fowler, John A. Pyle, John A. Raven and Mark A. Sutton
                : 20130122
                Affiliations
                [1 ]Karlsruhe Institute of Technology, Institute for Meteorology and Climate Research, Atmospheric Environmental Research (IMK-IFU) , Kreuzeckbahnstrasse 19, Garmisch-Partenkirchen 82467, Germany
                [2 ]International Livestock Research Institute, Old Naivasha Road, Nairobi 00100, Kenya
                [3 ]Institute of Biological and Environmental Sciences, University of Aberdeen , Zoology Building, Tillydrone Avenue, Aberdeen AB24 2TZ, UK
                [4 ]Institute of Forest Botany and Tree Physiology, Chair of Tree Physiology, University of Freiburg , Georges-Koehler-Allee 53/54, Freiburg 79110, Germany
                [5 ]Department of Forest and Soil Sciences, Institute of Soil Research, University of Natural Resources and Life Sciences Vienna , Peter Jordan Strasse 82, Vienna 1190, Austria
                Author notes

                One contribution of 15 to a Discussion Meeting Issue ‘ The global nitrogen cycle in the twenty-first century’.

                Article
                rstb20130122
                10.1098/rstb.2013.0122
                3682742
                23713120
                1af6b211-0501-4274-b553-7957ce75050e

                © 2013 The Authors. Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/3.0/, which permits unrestricted use, provided the original author and source are credited.

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                Review Article
                Custom metadata
                July 5, 2013

                Philosophy of science
                n2o,processes,environmental controls,modelling
                Philosophy of science
                n2o, processes, environmental controls, modelling

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