0
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Systems metabolic engineering of Escherichia coli for hyper-production of 5‑aminolevulinic acid

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Background

          5-Aminolevulinic acid (5-ALA) is a promising biostimulant, feed nutrient, and photodynamic drug with wide applications in modern agriculture and therapy. Although microbial production of 5-ALA has been improved realized by using metabolic engineering strategies during the past few years, there is still a gap between the present production level and the requirement of industrialization.

          Results

          In this study, pathway, protein, and cellular engineering strategies were systematically employed to construct an industrially competitive 5-ALA producing Escherichia coli. Pathways involved in precursor supply and product degradation were regulated by gene overexpression and synthetic sRNA-based repression to channel metabolic flux to 5-ALA biosynthesis. 5-ALA synthase was rationally engineered to release the inhibition of heme and improve the catalytic activity. 5-ALA transport and antioxidant defense systems were targeted to enhance cellular tolerance to intra- and extra-cellular 5-ALA. The final engineered strain produced 30.7 g/L of 5-ALA in bioreactors with a productivity of 1.02 g/L/h and a yield of 0.532 mol/mol glucose, represent a new record of 5-ALA bioproduction.

          Conclusions

          An industrially competitive 5-ALA producing E. coli strain was constructed with the metabolic engineering strategies at multiple layers (protein, pathway, and cellular engineering), and the strategies here can be useful for developing industrial-strength strains for biomanufacturing.

          Supplementary Information

          The online version contains supplementary material available at 10.1186/s13068-023-02280-9.

          Related collections

          Most cited references80

          • Record: found
          • Abstract: found
          • Article: not found

          One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products.

          We have developed a simple and highly efficient method to disrupt chromosomal genes in Escherichia coli in which PCR primers provide the homology to the targeted gene(s). In this procedure, recombination requires the phage lambda Red recombinase, which is synthesized under the control of an inducible promoter on an easily curable, low copy number plasmid. To demonstrate the utility of this approach, we generated PCR products by using primers with 36- to 50-nt extensions that are homologous to regions adjacent to the gene to be inactivated and template plasmids carrying antibiotic resistance genes that are flanked by FRT (FLP recognition target) sites. By using the respective PCR products, we made 13 different disruptions of chromosomal genes. Mutants of the arcB, cyaA, lacZYA, ompR-envZ, phnR, pstB, pstCA, pstS, pstSCAB-phoU, recA, and torSTRCAD genes or operons were isolated as antibiotic-resistant colonies after the introduction into bacteria carrying a Red expression plasmid of synthetic (PCR-generated) DNA. The resistance genes were then eliminated by using a helper plasmid encoding the FLP recombinase which is also easily curable. This procedure should be widely useful, especially in genome analysis of E. coli and other bacteria because the procedure can be done in wild-type cells.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Experimental Determination and System Level Analysis of Essential Genes in <i>Escherichia coli</i> MG1655

            Journal of Bacteriology, 185(19), 5673-5684 Defining the gene products that play an essential role in an organism's functional repertoire is vital to understanding the system level organization of living cells. We used a genetic footprinting technique for a genome-wide assessment of genes required for robust aerobic growth of in rich media. We identified 620 genes as essential and 3,126 genes as dispensable for growth under these conditions. Functional context analysis of these data allows individual functional assignments to be refined. Evolutionary context analysis demonstrates a significant tendency of essential genes to be preserved throughout the bacterial kingdom. Projection of these data over metabolic subsystems reveals topologic modules with essential and evolutionarily preserved enzymes with reduced capacity for error tolerance.
              Bookmark
              • Record: found
              • Abstract: not found
              • Article: not found

              A comprehensive metabolic map for production of bio-based chemicals

                Bookmark

                Author and article information

                Contributors
                puw@tib.cas.cn
                chen_jz@tib.cas.cn
                zhouyingy@tib.cas.cn
                1009858752@qq.com
                shituo@tib.cas.cn
                zhou_wj@tib.cas.cn
                guo_x@tib.cas.cn
                cainy@tib.cas.cn
                tanzijian@tib.cas.cn
                liu_j@tib.cas.cn
                feng_jh@tib.cas.cn
                wang_y@tib.cas.cn
                zheng_p@tib.cas.cn
                sun_jb@tib.cas.cn
                Journal
                Biotechnol Biofuels Bioprod
                Biotechnol Biofuels Bioprod
                Biotechnology for Biofuels and Bioproducts
                BioMed Central (London )
                2731-3654
                24 February 2023
                24 February 2023
                2023
                : 16
                : 31
                Affiliations
                [1 ]GRID grid.458513.e, ISNI 0000 0004 1763 3963, Key Laboratory of Systems Microbial Biotechnology, , Chinese Academy of Sciences, Tianjin Institute of Industrial Biotechnology, ; Tianjin, 300308 China
                [2 ]National Technology Innovation Center of Synthetic Biology, Tianjin, 300308 China
                [3 ]GRID grid.410726.6, ISNI 0000 0004 1797 8419, University of Chinese Academy of Sciences, ; Beijing, 100049 China
                [4 ]GRID grid.413109.e, ISNI 0000 0000 9735 6249, College of Biotechnology, , Tianjin University of Science and Technology, ; Tianjin, 300457 China
                Article
                2280
                10.1186/s13068-023-02280-9
                9951541
                36829220
                b92996c4-e374-4681-9cda-260e553a8446
                © The Author(s) 2023

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver ( http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated in a credit line to the data.

                History
                : 13 November 2022
                : 9 February 2023
                Funding
                Funded by: National Natural Science Foundation of China
                Award ID: 32000023
                Award ID: 32222004
                Award Recipient :
                Funded by: the Youth Innovation Promotion Association of Chinese Academy of Sciences
                Award ID: 2021177
                Award Recipient :
                Funded by: Tianjin “Project+Team” Key Training Program
                Award ID: XC202038
                Award Recipient :
                Funded by: Key R&D Program of Shandong Province
                Award ID: 2021CXGC010602
                Award Recipient :
                Funded by: Tianjin Synthetic Biotechnology Innovation Capacity Improvement Project
                Award ID: TSBICIP-KJGG-005
                Award Recipient :
                Funded by: National Key Research and Development Program of China
                Award ID: 2018YFA0901400
                Award Recipient :
                Categories
                Research
                Custom metadata
                © The Author(s) 2023

                5‑aminolevulinic acid,systems metabolic engineering,escherichia coli,synthetic srna,antioxidant defense system

                Comments

                Comment on this article