5
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Pareto optimality, economy–effectiveness trade-offs and ion channel degeneracy: improving population modelling for single neurons

      review-article
      1 , 2 , 3 , , 1 , 3 , 4 , 3 , 4
      Open Biology
      The Royal Society
      Pareto front, energy efficiency, multi-objective optimization, parameter space, performance space, ion channel correlations

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Abstract

          Neurons encounter unavoidable evolutionary trade-offs between multiple tasks. They must consume as little energy as possible while effectively fulfilling their functions. Cells displaying the best performance for such multi-task trade-offs are said to be Pareto optimal, with their ion channel configurations underpinning their functionality. Ion channel degeneracy, however, implies that multiple ion channel configurations can lead to functionally similar behaviour. Therefore, instead of a single model, neuroscientists often use populations of models with distinct combinations of ionic conductances. This approach is called population (database or ensemble) modelling. It remains unclear, which ion channel parameters in the vast population of functional models are more likely to be found in the brain. Here we argue that Pareto optimality can serve as a guiding principle for addressing this issue by helping to identify the subpopulations of conductance-based models that perform best for the trade-off between economy and functionality. In this way, the high-dimensional parameter space of neuronal models might be reduced to geometrically simple low-dimensional manifolds, potentially explaining experimentally observed ion channel correlations. Conversely, Pareto inference might also help deduce neuronal functions from high-dimensional Patch-seq data. In summary, Pareto optimality is a promising framework for improving population modelling of neurons and their circuits.

          Related collections

          Most cited references129

          • Record: found
          • Abstract: found
          • Article: not found

          An energy budget for signaling in the grey matter of the brain.

          Anatomic and physiologic data are used to analyze the energy expenditure on different components of excitatory signaling in the grey matter of rodent brain. Action potentials and postsynaptic effects of glutamate are predicted to consume much of the energy (47% and 34%, respectively), with the resting potential consuming a smaller amount (13%), and glutamate recycling using only 3%. Energy usage depends strongly on action potential rate--an increase in activity of 1 action potential/cortical neuron/s will raise oxygen consumption by 145 mL/100 g grey matter/h. The energy expended on signaling is a large fraction of the total energy used by the brain; this favors the use of energy efficient neural codes and wiring patterns. Our estimates of energy usage predict the use of distributed codes, with
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Variability, compensation and homeostasis in neuron and network function.

            Neurons in most animals live a very long time relative to the half-lives of all of the proteins that govern excitability and synaptic transmission. Consequently, homeostatic mechanisms are necessary to ensure stable neuronal and network function over an animal's lifetime. To understand how these homeostatic mechanisms might function, it is crucial to understand how tightly regulated synaptic and intrinsic properties must be for adequate network performance, and the extent to which compensatory mechanisms allow for multiple solutions to the production of similar behaviour. Here, we use examples from theoretical and experimental studies of invertebrates and vertebrates to explore several issues relevant to understanding the precision of tuning of synaptic and intrinsic currents for the operation of functional neuronal circuits.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Similar network activity from disparate circuit parameters.

              It is often assumed that cellular and synaptic properties need to be regulated to specific values to allow a neuronal network to function properly. To determine how tightly neuronal properties and synaptic strengths need to be tuned to produce a given network output, we simulated more than 20 million versions of a three-cell model of the pyloric network of the crustacean stomatogastric ganglion using different combinations of synapse strengths and neuron properties. We found that virtually indistinguishable network activity can arise from widely disparate sets of underlying mechanisms, suggesting that there could be considerable animal-to-animal variability in many of the parameters that control network activity, and that many different combinations of synaptic strengths and intrinsic membrane properties can be consistent with appropriate network performance.
                Bookmark

                Author and article information

                Contributors
                Role: ConceptualizationRole: Funding acquisitionRole: SupervisionRole: VisualizationRole: Writing – original draftRole: Writing – review & editing
                Role: ConceptualizationRole: Writing – original draftRole: Writing – review & editing
                Role: ConceptualizationRole: Writing – original draftRole: Writing – review & editing
                Journal
                Open Biol
                Open Biol
                RSOB
                royopenbio
                Open Biology
                The Royal Society
                2046-2441
                July 13, 2022
                July 2022
                July 13, 2022
                : 12
                : 7
                : 220073
                Affiliations
                [ 1 ] ICAR3R - Interdisciplinary Centre for 3Rs in Animal Research, Faculty of Medicine, Justus-Liebig-University, , Giessen, Germany
                [ 2 ] Institute of Clinical Neuroanatomy, Neuroscience Center, Goethe University, , Frankfurt/Main, Germany
                [ 3 ] Frankfurt Institute for Advanced Studies, , Frankfurt am Main, Germany
                [ 4 ] Ernst Strüngmann Institute (ESI) for Neuroscience in Cooperation with Max Planck Society, , Frankfurt am Main, Germany
                Author notes
                [ † ]

                Equally contributed.

                Author information
                http://orcid.org/0000-0001-6571-5742
                http://orcid.org/0000-0003-4895-8253
                http://orcid.org/0000-0001-5445-0507
                Article
                rsob220073
                10.1098/rsob.220073
                9277232
                35857898
                b19c6a5f-017e-4a61-b210-5ce6202e9897
                © 2022 The Authors.

                Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.

                History
                : March 12, 2022
                : June 23, 2022
                Funding
                Funded by: Bundesministerium für Bildung und Forschung, http://dx.doi.org/10.13039/501100002347;
                Award ID: 031L0229
                Categories
                1001
                133
                30
                Review
                Review Articles

                Life sciences
                pareto front,energy efficiency,multi-objective optimization,parameter space,performance space,ion channel correlations

                Comments

                Comment on this article