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      Electrocardiogram generation with a bidirectional LSTM-CNN generative adversarial network

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          Abstract

          Heart disease is a malignant threat to human health. Electrocardiogram (ECG) tests are used to help diagnose heart disease by recording the heart’s activity. However, automated medical-aided diagnosis with computers usually requires a large volume of labeled clinical data without patients' privacy to train the model, which is an empirical problem that still needs to be solved. To address this problem, we propose a generative adversarial network (GAN), which is composed of a bidirectional long short-term memory(LSTM) and convolutional neural network(CNN), referred as BiLSTM-CNN,to generate synthetic ECG data that agree with existing clinical data so that the features of patients with heart disease can be retained. The model includes a generator and a discriminator, where the generator employs the two layers of the BiLSTM networks and the discriminator is based on convolutional neural networks. The 48 ECG records from individuals of the MIT-BIH database were used to train the model. We compared the performance of our model with two other generative models, the recurrent neural network autoencoder(RNN-AE) and the recurrent neural network variational autoencoder (RNN-VAE). The results showed that the loss function of our model converged to zero the fastest. We also evaluated the loss of the discriminator of GANs with different combinations of generator and discriminator. The results indicated that BiLSTM-CNN GAN could generate ECG data with high morphological similarity to real ECG recordings.

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          Most cited references12

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          A dynamical model for generating synthetic electrocardiogram signals.

          A dynamical model based on three coupled ordinary differential equations is introduced which is capable of generating realistic synthetic electrocardiogram (ECG) signals. The operator can specify the mean and standard deviation of the heart rate, the morphology of the PQRST cycle, and the power spectrum of the RR tachogram. In particular, both respiratory sinus arrhythmia at the high frequencies (HFs) and Mayer waves at the low frequencies (LFs) together with the LF/HF ratio are incorporated in the model. Much of the beat-to-beat variation in morphology and timing of the human ECG, including QT dispersion and R-peak amplitude modulation are shown to result. This model may be employed to assess biomedical signal processing techniques which are used to compute clinical statistics from the ECG.
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            Novel segmented stacked autoencoder for effective dimensionality reduction and feature extraction in hyperspectral imaging

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              Light Gated Recurrent Units for Speech Recognition

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                Author and article information

                Contributors
                Bairong.shen@scu.edu.cn
                Journal
                Sci Rep
                Sci Rep
                Scientific Reports
                Nature Publishing Group UK (London )
                2045-2322
                1 May 2019
                1 May 2019
                2019
                : 9
                : 6734
                Affiliations
                [1 ]ISNI 0000 0001 0198 0694, GRID grid.263761.7, School of Computer Science and Technology, , Soochow University, ; Suzhou, 215006 China
                [2 ]ISNI 0000 0001 0198 0694, GRID grid.263761.7, Provincial Key Laboratory for Computer Information Processing Technology, , Soochow University, ; Suzhou, 215006 China
                [3 ]ISNI 0000 0004 1761 0825, GRID grid.459411.c, School of Computer Science and Engineering, , Changshu Institute of Technology, ; Changshu, 215500 China
                [4 ]ISNI 0000 0004 1770 1022, GRID grid.412901.f, Institutes for Systems Genetics, , West China Hospital, Sichuan University, ; Chengdu, 610041 China
                Article
                42516
                10.1038/s41598-019-42516-z
                6494992
                31043666
                a65e88e6-9986-4aa8-b9b3-6ca1be1c201e
                © The Author(s) 2019

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 11 January 2019
                : 2 April 2019
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100001809, National Natural Science Foundation of China (National Science Foundation of China);
                Award ID: 61303108, 61373094, and 61772355
                Award Recipient :
                Categories
                Article
                Custom metadata
                © The Author(s) 2019

                Uncategorized
                bioinformatics,interventional cardiology,scientific data
                Uncategorized
                bioinformatics, interventional cardiology, scientific data

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