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      SCF ubiquitin E3 ligase regulates DNA double-strand breaks in early meiotic recombination

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          Abstract

          Homeostasis of meiotic DNA double strand breaks (DSB) is critical for germline genome integrity and homologous recombination. Here we demonstrate an essential role for SKP1, a constitutive subunit of the SCF (SKP1-Cullin-F-box) ubiquitin E3 ligase, in early meiotic processes. SKP1 restrains accumulation of HORMAD1 and the pre-DSB complex (IHO1-REC114-MEI4) on the chromosome axis in meiotic germ cells. Loss of SKP1 prior to meiosis leads to aberrant localization of DSB repair proteins and a failure in synapsis initiation in meiosis of both males and females. Furthermore, SKP1 is crucial for sister chromatid cohesion during the pre-meiotic S-phase. Mechanistically, FBXO47, a meiosis-specific F-box protein, interacts with SKP1 and HORMAD1 and targets HORMAD1 for polyubiquitination and degradation in HEK293T cells. Our results support a model wherein the SCF ubiquitin E3 ligase prevents hyperactive DSB formation through proteasome-mediated degradation of HORMAD1 and subsequent modulation of the pre-DSB complex during meiosis.

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          Most cited references78

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          Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism.

          M S Wold (1997)
          Replication protein A [RPA; also known as replication factor A (RFA) and human single-stranded DNA-binding protein] is a single-stranded DNA-binding protein that is required for multiple processes in eukaryotic DNA metabolism, including DNA replication, DNA repair, and recombination. RPA homologues have been identified in all eukaryotic organisms examined and are all abundant heterotrimeric proteins composed of subunits of approximately 70, 30, and 14 kDa. Members of this family bind nonspecifically to single-stranded DNA and interact with and/or modify the activities of multiple proteins. In cells, RPA is phosphorylated by DNA-dependent protein kinase when RPA is bound to single-stranded DNA (during S phase and after DNA damage). Phosphorylation of RPA may play a role in coordinating DNA metabolism in the cell. RPA may also have a role in modulating gene expression.
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            The SCF ubiquitin ligase: insights into a molecular machine.

            Ubiquitin ligases are well suited to regulate molecular networks that operate on a post-translational timescale. The F-box family of proteins - which are the substrate-recognition components of the Skp1-Cul1-F-box-protein (SCF) ubiquitin ligase - are important players in many mammalian functions. Here we explore a unifying and structurally detailed view of SCF-mediated proteolytic control of cellular processes that has been revealed by recent studies.
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              SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box.

              We have identified the yeast and human homologs of the SKP1 gene as a suppressor of cdc4 mutants and as a cyclin F-binding protein. Skp1p indirectly binds cyclin A/Cdk2 through Skp2p, and directly binds Skp2p, cyclin F, and Cdc4p through a novel structural motif called the F-box. SKP1 is required for ubiquitin-mediated proteolysis of Cin2p, Clb5p, and the Cdk inhibitor Sic1p, and provides a link between these molecules and the proteolysis machinery. A large number of proteins contain the F-box motif and are thereby implicated in the ubiquitin pathway. Different skp1 mutants arrest cells in either G1 or G2, suggesting a connection between regulation of proteolysis in different stages of the cycle.
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                Author and article information

                Contributors
                Journal
                Nucleic Acids Res
                Nucleic Acids Res
                nar
                Nucleic Acids Research
                Oxford University Press
                0305-1048
                1362-4962
                20 May 2022
                30 April 2022
                30 April 2022
                : 50
                : 9
                : 5129-5144
                Affiliations
                Department of Biomedical Sciences, University of Pennsylvania School of Veterinary Medicine , Philadelphia, PA, USA
                Department of Biomedical Sciences, University of Pennsylvania School of Veterinary Medicine , Philadelphia, PA, USA
                Department of Tissue and Embryology, Hubei Provincial Key Laboratory of Developmentally Originated Disease, School of Basic Medical Sciences, Wuhan University , Wuhan, Hubei Province, China
                Department of Biomedical Sciences, University of Pennsylvania School of Veterinary Medicine , Philadelphia, PA, USA
                Department of Pathobiology, University of Pennsylvania School of Veterinary Medicine , Philadelphia, PA, USA
                Department of Biomedical Sciences, University of Pennsylvania School of Veterinary Medicine , Philadelphia, PA, USA
                Department of Cancer Biology, University of Pennsylvania Perelman School of Medicine , Philadelphia, PA, USA
                Department of Tissue and Embryology, Hubei Provincial Key Laboratory of Developmentally Originated Disease, School of Basic Medical Sciences, Wuhan University , Wuhan, Hubei Province, China
                Department of Biomedical Sciences, University of Pennsylvania School of Veterinary Medicine , Philadelphia, PA, USA
                Author notes
                To whom correspondence should be addressed. Tel: +1 215 746 0160; Email: pwang@ 123456vet.upenn.edu
                Author information
                https://orcid.org/0000-0002-0136-5103
                https://orcid.org/0000-0001-7058-5911
                https://orcid.org/0000-0003-2311-4089
                Article
                gkac304
                10.1093/nar/gkac304
                9122608
                35489071
                a59aa38f-057a-4d11-84da-11ca0b4be2fd
                © The Author(s) 2022. Published by Oxford University Press on behalf of Nucleic Acids Research.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License ( https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@ 123456oup.com

                History
                : 14 April 2022
                : 08 April 2022
                : 07 January 2022
                Page count
                Pages: 16
                Funding
                Funded by: NIH, DOI 10.13039/100000002;
                Funded by: National Institute of Child Health and Human Development, DOI 10.13039/100000071;
                Award ID: HD069592
                Award ID: HD068157
                Funded by: National Cancer Institute, DOI 10.13039/100000054;
                Award ID: R01CA207513
                Award ID: R01CA240814
                Funded by: National Natural Science Foundation of China, DOI 10.13039/501100001809;
                Award ID: 31771588
                Categories
                AcademicSubjects/SCI00010
                Genome Integrity, Repair and Replication

                Genetics
                Genetics

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