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      Inhibition of Thiamine Diphosphate-Dependent Enzymes by Triazole-Based Thiamine Analogues

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          Abstract

          Thiamine is metabolized into the coenzyme thiamine diphosphate (ThDP). Interrupting thiamine utilization leads to disease states. Oxythiamine, a thiamine analogue, is metabolized into oxythiamine diphosphate (OxThDP), which inhibits ThDP-dependent enzymes. Oxythiamine has been used to validate thiamine utilization as an anti-malarial drug target. However, high oxythiamine doses are needed in vivo because of its rapid clearance, and its potency decreases dramatically with thiamine levels. We report herein cell-permeable thiamine analogues possessing a triazole ring and a hydroxamate tail replacing the thiazolium ring and diphosphate groups of ThDP. We characterize their broad-spectrum competitive inhibition of ThDP-dependent enzymes and of Plasmodium falciparum proliferation. We demonstrate how the cellular thiamine-utilization pathway can be probed by using our compounds and oxythiamine in parallel.

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          Metabolic Heterogeneity in Human Lung Tumors.

          Non-small cell lung cancer (NSCLC) is heterogeneous in the genetic and environmental parameters that influence cell metabolism in culture. Here, we assessed the impact of these factors on human NSCLC metabolism in vivo using intraoperative (13)C-glucose infusions in nine NSCLC patients to compare metabolism between tumors and benign lung. While enhanced glycolysis and glucose oxidation were common among these tumors, we observed evidence for oxidation of multiple nutrients in each of them, including lactate as a potential carbon source. Moreover, metabolically heterogeneous regions were identified within and between tumors, and surprisingly, our data suggested potential contributions of non-glucose nutrients in well-perfused tumor areas. Our findings not only demonstrate the heterogeneity in tumor metabolism in vivo but also highlight the strong influence of the microenvironment on this feature.
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            The role of ligand efficiency metrics in drug discovery.

            The judicious application of ligand or binding efficiency metrics, which quantify the molecular properties required to obtain binding affinity for a drug target, is gaining traction in the selection and optimization of fragments, hits and leads. Retrospective analysis of recently marketed oral drugs shows that they frequently have highly optimized ligand efficiency values for their targets. Optimizing ligand efficiency metrics based on both molecular mass and lipophilicity, when set in the context of the specific target, has the potential to ameliorate the inflation of these properties that has been observed in current medicinal chemistry practice, and to increase the quality of drug candidates.
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              Thirty Years of HDAC Inhibitors: 2020 Insight and Hindsight

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                Author and article information

                Journal
                ACS Med Chem Lett
                ACS Med Chem Lett
                ml
                amclct
                ACS Medicinal Chemistry Letters
                American Chemical Society
                1948-5875
                11 April 2023
                11 May 2023
                11 April 2023
                : 14
                : 5
                : 621-628
                Affiliations
                []Yusuf Hamied Department of Chemistry, University of Cambridge , Lensfield Road, Cambridge CB2 1EW, U.K.
                []Research School of Biology, The Australian National University , Canberra, ACT 2601, Australia
                Author notes
                Author information
                https://orcid.org/0000-0003-3343-8917
                https://orcid.org/0000-0003-3345-8440
                https://orcid.org/0000-0003-3408-5199
                Article
                10.1021/acsmedchemlett.3c00047
                10184313
                37197459
                81044772-4833-40ea-8694-a4f27eae324e
                © 2023 The Authors. Published by American Chemical Society

                Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained ( https://creativecommons.org/licenses/by/4.0/).

                History
                : 14 February 2023
                : 07 April 2023
                Funding
                Funded by: K.M. Medhealth, doi NA;
                Award ID: NA
                Categories
                Letter
                Custom metadata
                ml3c00047
                ml3c00047

                Pharmaceutical chemistry
                thiamine diphosphate,enzyme inhibition,metal-binding group,malaria
                Pharmaceutical chemistry
                thiamine diphosphate, enzyme inhibition, metal-binding group, malaria

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