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      Targeting lipoxygenases to suppress ferroptotic cell death

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          Abstract

          Ferroptosis (1) is an iron-dependent form of cell death associated with the accumulation of lipid peroxidation products, which eventually results in membrane permeabilization and osmolysis. It is believed to link the long-observed increase in lipid peroxidation products to the tissue damage observed in many acute and chronic pathological contexts, including neurodegeneration, ischemic stroke, and traumatic brain injury. As such, ferroptosis has emerged as an important target for therapeutic development. Distinct from apoptosis and other forms of cell death, ferroptosis is triggered when the capacity of the cell to detoxify (phospho)lipid hydroperoxides is overcome (2, 3). Lipid hydroperoxides arise due to autoxidation, a chain reaction propagated by reactions of lipid-derived free radicals (4), as well as by enzyme-catalyzed processes (Fig. 1, Middle) (5). Hydroperoxides derived from polyunsaturated lipids esterified to phosphatidyl-ethanolamine (PE) are believed to be particularly important in ferroptosis execution (6). In PNAS, Dar et al. (7) report the first attempt to develop inhibitors designed to target an enzyme-protein complex that oxidizes PE lipids. Fig. 1. Unrestrained peroxidation of membrane lipids drives ferroptotic cell death. Inhibition of both nonenzymatic lipid peroxidation (autoxidation) and enzyme-catalyzed lipid peroxidation may suppress ferroptosis. Newly reported FerroLOXins have been designed to inhibit oxidation of phosphatidylethanolamine lipids by a 15-LOX2/PEBP1 complex. Since FerroLOXins are aromatic amines, such as the canonical RTA inhibitors ferrostatin-1, liproxstatin-1, and PTG-00, they may also prevent nonenzymatic lipid peroxidation. Of the limited number of enzymes that directly catalyze lipid peroxidation, the 15-lipoxygenases (15-LOX1 and 15-LOX2) have been most often implicated in ferroptosis execution (8 –11). Lipoxygenases (LOXs) are nonheme iron-containing enzymes that catalyze oxygenation of free arachidonic acid and some related polyunsaturated fatty acids in a largely regioselective and stereoselective manner (5). Although LOXs have been found to be dispensable for ferroptosis both in vitro (12) and in vivo (2, 13, 14), cells which express substantial levels may be sensitized to ferroptosis induction (12). To date, only LOX inhibitors with off-target radical-trapping antioxidant (RTA) activity have been reported to suppress ferroptosis (6, 15). RTAs suppress ferroptosis by trapping the lipid-derived free radicals that propagate nonenzymatic lipid peroxidation (16, 17) and comprise the overwhelming majority of ferroptosis inhibitors yet identified, including the archetype ferroptosis inhibitors ferrostatin-1 (1) and liproxstatin-1 (2), and the more potent phenoxazine PTG-00 (Fig. 1, Left) (18). LOX inhibitors lacking RTA activity have been shown only to desensitize cells to ferroptosis (12). Based on the previous observation that 15-lipoxygenase-2 (15-LOX2), when complexed with PE binding protein-1 (PEBP1) (19), can catalyze the oxygenation of polyunsaturated lipids esterified to PE (Fig. 1, Right), Dar et al. sought to develop inhibitors with specificity for the complex. Starting from scaffolds of known 15-LOX2 inhibitors, and the results of computations suggesting that association with PEBP1 increases the volume of the catalytic site of 15-LOX2, they added substituents to increase affinity for the complex over 15-LOX2 alone. Cell-based assays (in human bronchial epithelial cells) revealed that derivatives which featured an N–H bond adjacent to the imidazole substituent were good ferroptosis suppressors. Increasing the lipophilicity of the compounds, particularly via inclusion of fluoroalkyl substituents, afforded the most potent inhibitors (EC50~ 100 nM). In PNAS, Dar et al. report the first attempt to develop inhibitors designed to target an enzyme-protein complex that oxidizes PE lipids. Consistent with the premise, these inhibitors suppressed oxygenation of arachidonic acid esterified to PE by the combination of 15-LOX2 and PEBP1 in a liposome model (by ~20 to 25%), but had no measurable effect on 15-LOX2 alone. Computational studies suggest that the enhanced inhibition of the 15-LOX2/PEBP1 complex over 15-LOX2 may result from blocking O2 access to the active site, dislodging the oxidizable sidechain of the phospholipid from the active site, and favoring binding of the nonoxidizable sidechain. Further studies demonstrated that two of the compounds, coined FerroLOXIN-1 and FerroLOXIN-2, were unable to rescue cells from necroptosis, pyroptosis, or apoptosis—suggesting specificity for ferroptosis, similarly to the archetype inhibitors ferrostatin-1 and liproxstatin-1. Similar experiments in four additional cell lines (intestinal epithelial cells Caco2 and FHs 74 Int) and cancer cells (HT-1080 and A375) suggest that ferroptosis suppression by FerroLOXINs is general. Since ferroptosis suppression by the FerroLOXINs was observed in cells that have been reported to not express 15-LOX2 (e.g., HT-1080s) (20), it is possible that they possess off-target RTA activity in addition to their ability to target the 15-LOX2/PEBP1 complex. It is perhaps not a coincidence that the FerroLOXINs possess aromatic amine moieties—the key chemical functionality that features in ferrostatin-1, liproxstatin-1, and PTG-00. Future work should address this point, by carrying out studies to assess the ability of FerroLOXINs to prevent nonenzymatic lipid peroxidation in phospholipid bilayers, as well as to validate 15-LOX2/PEBP1 as the target in cells which do express 15-LOX2 by demonstrating the loss of antiferroptotic activity when the genes encoding 15-LOX2 and/or PEBP1 are knocked down/out. Regardless of the precise mechanism of ferroptosis suppression, the FerroLOXINs were found to be active in vivo as demonstrated by the suppression of radiation damage in mice. Radiation damage has long been associated with augmented levels of lipid peroxidation, suggesting a role of ferroptosis in the associated tissue damage. Indeed, the most common ferroptosis inducers are known to synergize with ionizing radiation, and genetic and biochemical hallmarks of ferroptosis are observed in radiation-treated cells (21, 22). Moreover, RTAs such as ferrostatin-1 are good radioprotectants (21, 22). Similarly, FerroLOXIN treatment (25 mg/kg 24 h after irradiation) significantly prolonged the survival of both female and male mice. This was associated with the protection of the intestinal epithelium, a particularly radiosensitive tissue. The levels of PE-derived hydroperoxides were correspondingly reduced, linking the protective effect with suppression of lipid peroxidation. In contrast, markers of apoptotic and necroptotic cell death were unaffected by FerroLOXIN treatment—again implicating ferroptosis specifically in radiation damage. Of the many individual proteins and metabolic pathways which have been found to modulate a cell’s sensitivity to ferroptosis (23), LOXs are unique because they directly contribute to the cellular pool of (phospho)lipid hydroperoxides. Accordingly, they can seed nonenzymatic lipid peroxidation when their reaction products undergo one-electron reduction by labile iron in the same manner as nonenzymatically produced (phospho)lipid hydroperoxides. Since ferroptosis occurs once lipid peroxidation can no longer be managed by the cell, preventing the accumulation of hydroperoxides of any origin—enzymatic or not—should contribute to ferroptosis suppression. Thus, LOXs and/or their complexes with scaffolding proteins such as PEBP1 present a unique point of intervention upstream of, and/or complementary to, RTAs. Moreover, they may afford a means to achieve tissue specificity in the fight against ferroptosis, given that LOXs are not expressed at meaningful levels in all cells and tissues (24). It will be exciting to see whether further research establishes the FerroLOXINs as first-in-class inhibitors that can provide such a proof of principle and whether they can be developed into therapeutics for ferroptosis-related disease.

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          Ferroptosis: an iron-dependent form of nonapoptotic cell death.

          Nonapoptotic forms of cell death may facilitate the selective elimination of some tumor cells or be activated in specific pathological states. The oncogenic RAS-selective lethal small molecule erastin triggers a unique iron-dependent form of nonapoptotic cell death that we term ferroptosis. Ferroptosis is dependent upon intracellular iron, but not other metals, and is morphologically, biochemically, and genetically distinct from apoptosis, necrosis, and autophagy. We identify the small molecule ferrostatin-1 as a potent inhibitor of ferroptosis in cancer cells and glutamate-induced cell death in organotypic rat brain slices, suggesting similarities between these two processes. Indeed, erastin, like glutamate, inhibits cystine uptake by the cystine/glutamate antiporter (system x(c)(-)), creating a void in the antioxidant defenses of the cell and ultimately leading to iron-dependent, oxidative death. Thus, activation of ferroptosis results in the nonapoptotic destruction of certain cancer cells, whereas inhibition of this process may protect organisms from neurodegeneration. Copyright © 2012 Elsevier Inc. All rights reserved.
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            Ferroptosis: A Regulated Cell Death Nexus Linking Metabolism, Redox Biology, and Disease

            Ferroptosis is a form of regulated cell death characterized by the iron-dependent accumulation of lipid hydroperoxides to lethal levels. Emerging evidence suggests that ferroptosis represents an ancient vulnerability caused by the incorporation of polyunsaturated fatty acids into cellular membranes, and cells have developed complex systems that exploit and defend against this vulnerability in different contexts. The sensitivity to ferroptosis is tightly linked to numerous biological processes, including amino acid, iron, and polyunsaturated fatty acid metabolism, and the biosynthesis of glutathione, phospholipids, NADPH, and coenzyme Q10. Ferroptosis has been implicated in the pathological cell death associated with degenerative diseases (i.e., Alzheimer's, Huntington's, and Parkinson's diseases), carcinogenesis, stroke, intracerebral hemorrhage, traumatic brain injury, ischemia-reperfusion injury, and kidney degeneration in mammals and is also implicated in heat stress in plants. Ferroptosis may also have a tumor-suppressor function that could be harnessed for cancer therapy. This Primer reviews the mechanisms underlying ferroptosis, highlights connections to other areas of biology and medicine, and recommends tools and guidelines for studying this emerging form of regulated cell death.
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              Ferroptosis: mechanisms, biology and role in disease

              The research field of ferroptosis has seen exponential growth over the past few years, since the term was coined in 2012. This unique modality of cell death, driven by iron-dependent phospholipid peroxidation, is regulated by multiple cellular metabolic pathways, including redox homeostasis, iron handling, mitochondrial activity and metabolism of amino acids, lipids and sugars, in addition to various signalling pathways relevant to disease. Numerous organ injuries and degenerative pathologies are driven by ferroptosis. Intriguingly, therapy-resistant cancer cells, particularly those in the mesenchymal state and prone to metastasis, are exquisitely vulnerable to ferroptosis. As such, pharmacological modulation of ferroptosis, via both its induction and its inhibition, holds great potential for the treatment of drug-resistant cancers, ischaemic organ injuries and other degenerative diseases linked to extensive lipid peroxidation. In this Review, we provide a critical analysis of the current molecular mechanisms and regulatory networks of ferroptosis, the potential physiological functions of ferroptosis in tumour suppression and immune surveillance, and its pathological roles, together with a potential for therapeutic targeting. Importantly, as in all rapidly evolving research areas, challenges exist due to misconceptions and inappropriate experimental methods. This Review also aims to address these issues and to provide practical guidelines for enhancing reproducibility and reliability in studies of ferroptosis. Finally, we discuss important concepts and pressing questions that should be the focus of future ferroptosis research.
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                Author and article information

                Contributors
                Journal
                Proc Natl Acad Sci U S A
                Proc Natl Acad Sci U S A
                PNAS
                Proceedings of the National Academy of Sciences of the United States of America
                National Academy of Sciences
                0027-8424
                1091-6490
                5 July 2023
                18 July 2023
                5 January 2024
                : 120
                : 29
                : e2309317120
                Affiliations
                [1] aDepartment of Chemistry and Biomolecular Sciences, University of Ottawa , Ottawa, ON K1N 6N5, Canada
                Author notes
                Author information
                https://orcid.org/0000-0002-7305-745X
                Article
                202309317
                10.1073/pnas.2309317120
                10629513
                37406088
                68952704-d527-42ad-be2f-34f9152fab1f
                Copyright © 2023 the Author(s). Published by PNAS.

                This article is distributed under Creative Commons Attribution-NonCommercial-NoDerivatives License 4.0 (CC BY-NC-ND).

                History
                Page count
                Pages: 3, Words: 1127
                Funding
                Funded by: Gouvernement du Canada | Natural Sciences and Engineering Research Council of Canada (NSERC), FundRef 501100000038;
                Award ID: RGPIN-2022-05058
                Award Recipient : Derek A Pratt
                Categories
                comm, Commentary
                biochem, Biochemistry
                407
                437
                Commentary
                Biological Sciences
                Biochemistry

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