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      The making of suberin

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          Summary

          Outer protective barriers of animals use a variety of bio‐polymers, based on either proteins (e.g. collagens), or modified sugars (e.g. chitin). Plants, however, have come up with a particular solution, based on the polymerisation of lipid‐like precursors, giving rise to cutin and suberin. Suberin is a structural lipophilic polyester of fatty acids, glycerol and some aromatics found in cell walls of phellem, endodermis, exodermis, wound tissues, abscission zones, bundle sheath and other tissues. It deposits as a hydrophobic layer between the (ligno)cellulosic primary cell wall and plasma membrane. Suberin is highly protective against biotic and abiotic stresses, shows great developmental plasticity and its chemically recalcitrant nature might assist the sequestration of atmospheric carbon by plants. The aim of this review is to integrate the rapidly accelerating genetic and cell biological discoveries of recent years with the important chemical and structural contributions obtained from very diverse organisms and tissue layers. We critically discuss the order and localisation of the enzymatic machinery synthesising the presumed substrates for export and apoplastic polymerisation. We attempt to explain observed suberin linkages by diverse enzyme activities and discuss the spatiotemporal relationship of suberin with lignin and ferulates, necessary to produce a functional suberised cell wall.

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          Most cited references139

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          The biomass distribution on Earth

          Significance The composition of the biosphere is a fundamental question in biology, yet a global quantitative account of the biomass of each taxon is still lacking. We assemble a census of the biomass of all kingdoms of life. This analysis provides a holistic view of the composition of the biosphere and allows us to observe broad patterns over taxonomic categories, geographic locations, and trophic modes.
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            Acyl-lipid metabolism.

            Acyl lipids in Arabidopsis and all other plants have a myriad of diverse functions. These include providing the core diffusion barrier of the membranes that separates cells and subcellular organelles. This function alone involves more than 10 membrane lipid classes, including the phospholipids, galactolipids, and sphingolipids, and within each class the variations in acyl chain composition expand the number of structures to several hundred possible molecular species. Acyl lipids in the form of triacylglycerol account for 35% of the weight of Arabidopsis seeds and represent their major form of carbon and energy storage. A layer of cutin and cuticular waxes that restricts the loss of water and provides protection from invasions by pathogens and other stresses covers the entire aerial surface of Arabidopsis. Similar functions are provided by suberin and its associated waxes that are localized in roots, seed coats, and abscission zones and are produced in response to wounding. This chapter focuses on the metabolic pathways that are associated with the biosynthesis and degradation of the acyl lipids mentioned above. These pathways, enzymes, and genes are also presented in detail in an associated website (ARALIP: http://aralip.plantbiology.msu.edu/). Protocols and methods used for analysis of Arabidopsis lipids are provided. Finally, a detailed summary of the composition of Arabidopsis lipids is provided in three figures and 15 tables.
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              The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes.

              Wood is a major pool of organic carbon that is highly resistant to decay, owing largely to the presence of lignin. The only organisms capable of substantial lignin decay are white rot fungi in the Agaricomycetes, which also contains non-lignin-degrading brown rot and ectomycorrhizal species. Comparative analyses of 31 fungal genomes (12 generated for this study) suggest that lignin-degrading peroxidases expanded in the lineage leading to the ancestor of the Agaricomycetes, which is reconstructed as a white rot species, and then contracted in parallel lineages leading to brown rot and mycorrhizal species. Molecular clock analyses suggest that the origin of lignin degradation might have coincided with the sharp decrease in the rate of organic carbon burial around the end of the Carboniferous period.
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                Author and article information

                Contributors
                olga.serra@udg.edu
                niko.geldner@unil.ch
                Journal
                New Phytol
                New Phytol
                10.1111/(ISSN)1469-8137
                NPH
                The New Phytologist
                John Wiley and Sons Inc. (Hoboken )
                0028-646X
                1469-8137
                28 May 2022
                August 2022
                : 235
                : 3 ( doiID: 10.1111/nph.v235.3 )
                : 848-866
                Affiliations
                [ 1 ] Laboratori del Suro Department of Biology University of Girona Campus Montilivi Girona 17003 Spain
                [ 2 ] Department of Plant Molecular Biology University of Lausanne UNIL‐Sorge, Biophore Building Lausanne 1015 Switzerland
                Author notes
                [*] [* ] Authors for correspondence:

                Olga Serra

                Email: olga.serra@ 123456udg.edu

                Niko Geldner

                Email: niko.geldner@ 123456unil.ch

                [ * ]

                These authors contributed equally to this work.

                Author information
                https://orcid.org/0000-0002-1678-0932
                https://orcid.org/0000-0002-2300-9644
                Article
                NPH18202 2022-39386
                10.1111/nph.18202
                9994434
                35510799
                649ad00a-4332-4ff0-8104-6b04d9e3a719
                © 2022 The Authors. New Phytologist © 2022 New Phytologist Foundation

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

                History
                : 23 February 2022
                : 15 April 2022
                Page count
                Figures: 4, Tables: 2, Pages: 19, Words: 19356
                Funding
                Funded by: H2020 European Research Council , doi 10.13039/100010663;
                Funded by: Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung , doi 10.13039/501100001711;
                Funded by: FEDER/Spanish Ministerio de Ciencia e Innovación – Agencia Estatal de Investigación
                Award ID: PID2019‐110330GB‐C21
                Categories
                Tansley Review
                Review
                Tansley Reviews
                Custom metadata
                2.0
                August 2022
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.1.7 mode:remove_FC converted:27.07.2022

                Plant science & Botany
                apoplastic barrier,cell wall,fatty acyl metabolism,ferulic acid,lignin,lipid intracellular transport,suberin,suberin lamellae

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