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      Spatiotemporal modulations in heterotypic condensates of prion and α-synuclein control phase transitions and amyloid conversion

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          Abstract

          Biomolecular condensation via liquid-liquid phase separation of proteins and nucleic acids is associated with a range of critical cellular functions and neurodegenerative diseases. Here, we demonstrate that complex coacervation of the prion protein and α-synuclein within narrow stoichiometry results in the formation of highly dynamic, reversible, thermo-responsive liquid droplets via domain-specific electrostatic interactions between the positively-charged intrinsically disordered N-terminal segment of prion and the acidic C-terminal tail of α-synuclein. The addition of RNA to these coacervates yields multiphasic, vesicle-like, hollow condensates. Picosecond time-resolved measurements revealed the presence of transient electrostatic nanoclusters that are stable on the nanosecond timescale and can undergo breaking-and-making of interactions on slower timescales giving rise to a liquid-like behavior in the mesoscopic regime. The liquid-to-solid transition drives a rapid conversion of complex coacervates into heterotypic amyloids. Our results suggest that synergistic prion-α-synuclein interactions within condensates provide mechanistic underpinnings of their physiological role and overlapping neuropathological features.

          Abstract

          The authors show that prion protein and α-synuclein undergo phase separation through domain-specific electrostatic interactions. These complex coacervates possess electrostatic nanoclusters and can convert into multiphasic condensates and amyloids.

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          Biomolecular condensates: organizers of cellular biochemistry

          In addition to membrane-bound organelles, eukaryotic cells feature various membraneless compartments, including the centrosome, the nucleolus and various granules. Many of these compartments form through liquid–liquid phase separation, and the principles, mechanisms and regulation of their assembly as well as their cellular functions are now beginning to emerge.
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            WSXM: a software for scanning probe microscopy and a tool for nanotechnology.

            In this work we briefly describe the most relevant features of WSXM, a freeware scanning probe microscopy software based on MS-Windows. The article is structured in three different sections: The introduction is a perspective on the importance of software on scanning probe microscopy. The second section is devoted to describe the general structure of the application; in this section the capabilities of WSXM to read third party files are stressed. Finally, a detailed discussion of some relevant procedures of the software is carried out.
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              Anomalous collapses of Nares Strait ice arches leads to enhanced export of Arctic sea ice

              The ice arches that usually develop at the northern and southern ends of Nares Strait play an important role in modulating the export of Arctic Ocean multi-year sea ice. The Arctic Ocean is evolving towards an ice pack that is younger, thinner, and more mobile and the fate of its multi-year ice is becoming of increasing interest. Here, we use sea ice motion retrievals from Sentinel-1 imagery to report on the recent behavior of these ice arches and the associated ice fluxes. We show that the duration of arch formation has decreased over the past 20 years, while the ice area and volume fluxes along Nares Strait have both increased. These results suggest that a transition is underway towards a state where the formation of these arches will become atypical with a concomitant increase in the export of multi-year ice accelerating the transition towards a younger and thinner Arctic ice pack.
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                Author and article information

                Contributors
                mukhopadhyay@iisermohali.ac.in
                Journal
                Nat Commun
                Nat Commun
                Nature Communications
                Nature Publishing Group UK (London )
                2041-1723
                3 March 2022
                3 March 2022
                2022
                : 13
                : 1154
                Affiliations
                [1 ]GRID grid.458435.b, ISNI 0000 0004 0406 1521, Centre for Protein Science, Design and Engineering, , Indian Institute of Science Education and Research (IISER) Mohali, ; Punjab, India
                [2 ]GRID grid.458435.b, ISNI 0000 0004 0406 1521, Department of Biological Sciences, , Indian Institute of Science Education and Research (IISER) Mohali, ; Punjab, India
                [3 ]GRID grid.458435.b, ISNI 0000 0004 0406 1521, Department of Chemical Sciences, , Indian Institute of Science Education and Research (IISER) Mohali, ; Punjab, India
                Author information
                http://orcid.org/0000-0003-1242-9958
                Article
                28797
                10.1038/s41467-022-28797-5
                8894376
                35241680
                5d52f369-fa99-473b-8946-2a4e1e60bd9d
                © The Author(s) 2022

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 8 September 2021
                : 10 February 2022
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100001407, Department of Biotechnology, Ministry of Science and Technology (DBT);
                Award ID: Fellowship
                Award Recipient :
                Funded by: FundRef https://doi.org/10.13039/501100001412, Council of Scientific and Industrial Research (CSIR);
                Award ID: Fellowship
                Award Recipient :
                Funded by: FundRef https://doi.org/10.13039/501100001409, Department of Science and Technology, Ministry of Science and Technology (DST);
                Award ID: Nano-Mission Grant # SR/NM/NS-1475/2014
                Award ID: FIST # SR/FST/LS-II/2017/97
                Award Recipient :
                Funded by: FundRef https://doi.org/10.13039/501100001843, DST | Science and Engineering Research Board (SERB);
                Award ID: SUPRA # SPR/2020/000333
                Award Recipient :
                Funded by: FundRef https://doi.org/10.13039/501100004541, Ministry of Human Resource Development (Ministry of Human Resource Development, Government of India);
                Award ID: Centre of Excellence Grant # MHRD-14-0064
                Award Recipient :
                Categories
                Article
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                © The Author(s) 2022

                Uncategorized
                intrinsically disordered proteins,protein aggregation
                Uncategorized
                intrinsically disordered proteins, protein aggregation

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