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      Did a small thermosensitive intron contribute to the temperate adaptation of Drosophila melanogaster?

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          Abstract

          Drosophila melanogaster was first used for research in the early 1900’s by scientists located in the northeastern corridor of the United States, gaining prominence with the establishment of the famous “fly room” by Thomas Hunt Morgan at Columbia University circa1908. Several reasons for using D. melanogaster in research are well known; easy and inexpensive to breed, short lifespan, amongst others. But why was this insect species flourishing in a temperate northeast region of the New World during the late 1800’s when they originated in the tropical forests of sub-Saharan Africa millions of years ago? The purpose of this review is to provide an overview of the experimental underpinnings for a temperature sensitive mechanism that likely contributed to the rather unique ability of Drosophila melanogaster to successfully colonize temperate regions on a global scale. It also furnishes an interesting historical insight into how ancestral genetics serendipitously held the keys to the journey of D. melanogaster becoming such a popular research organism. While numerous papers have been published detailing different aspects of the work, this is the first comprehensive review. Herein, I discuss the discovery of a small thermosensitive intron in D. melanogaster (termed dmpi8) that controls midday siesta levels. Like many day-active animals, Drosophila exhibits a robust genetically based midday siesta that is protective in warm climates. Yet long bouts of daytime inactivity might be counterproductive in temperate climates, especially since daylength in these regions is shorter during the cooler months. Evidence discussed in this review strongly indicates that targeting of dmpi8 splicing efficiency by natural selection enhanced the ability of D. melanogaster to scale daytime sleep levels commensurate with a wide range of local climates. Surprisingly, dmpi8 splicing regulates midday siesta levels in trans by controlling the expression of a nearby anti-siesta gene called daywake. The “fortuitous” genetic arrangement of a thermosensitive intron in proximity to an anti-siesta gene might have contributed to the cosmopolitan nature of D. melanogaster and its historical journey in becoming a popular research organism.

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          Transcriptional architecture of the mammalian circadian clock

          Next-generation sequencing approaches have yielded new insights into circadian function. Here, Takahashi reviews genome-wide analyses of the clock transcriptional feedback loop in mammals, which reveal a global circadian regulation of transcription factor occupancy, RNA polymerase II recruitment and initiation, nascent transcription and chromatin remodelling.
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            A two process model of sleep regulation.

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              RNA mis-splicing in disease.

              The human transcriptome is composed of a vast RNA population that undergoes further diversification by splicing. Detecting specific splice sites in this large sequence pool is the responsibility of the major and minor spliceosomes in collaboration with numerous splicing factors. This complexity makes splicing susceptible to sequence polymorphisms and deleterious mutations. Indeed, RNA mis-splicing underlies a growing number of human diseases with substantial societal consequences. Here, we provide an overview of RNA splicing mechanisms followed by a discussion of disease-associated errors, with an emphasis on recently described mutations that have provided new insights into splicing regulation. We also discuss emerging strategies for splicing-modulating therapy.
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                Author and article information

                Journal
                101668511
                44362
                Med Res Arch
                Med Res Arch
                Medical research archives
                2375-1916
                2375-1924
                30 November 2023
                November 2023
                22 December 2023
                : 11
                : 11
                : 4624
                Affiliations
                Center for Advanced Biotechnology and Medicine, Department of Molecular Biology and Biochemistry Rutgers University
                Author notes
                Article
                NIHMS1948504
                10.18103/mra.v11i11.4624
                10745283
                38144715
                57a3051a-7f9b-4b39-9ada-07eab66e2765

                This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

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