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      Novel compounds protect auditory hair cells against gentamycin-induced apoptosis by maintaining the expression level of H3K4me2

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          Abstract

          Aminoglycoside-induced hair cell (HC) loss is a major cause of hearing impairment, and the effective prevention of HC loss remains an unmet medical need. Epigenetic mechanisms have been reported to be involved in protecting cochlear cells against ototoxic drug injury, and in this study we developed new bioactive compounds that have similar chemical structures as the epigenetics-related lysine-specific demethylase 1 (LSD1) inhibitors. LSD1 inhibitors have been reported to protect cochlear cells by preventing demethylation of dimethylated histone H3K4 (H3K4me2). To determine whether these new compounds exert similar protective effects on HCs, we treated mouse cochlear explant cultures with the new compounds together with gentamycin. There was a severe loss of HCs in the organ of Corti after gentamycin exposure, while co-treatment with the new compounds significantly protected against gentamycin-induced HC loss. H3K4me2 levels in the nuclei of HCs decreased after exposure to gentamycin, but H3K4me2 levels were maintained in the presence of the new compounds. Apoptosis is also involved in the injury process, and the new compounds protected the inner ear HCs against apoptosis by reducing caspase-3 activation. Together, our findings demonstrate that our new compounds prevent gentamycin-induced HC loss by preventing the demethylation of H3K4me2 and by inhibiting apoptosis, and these results might provide the theoretical basis for novel drug development for hearing protection.

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          Most cited references56

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          Epigenetic programming by maternal behavior.

          Here we report that increased pup licking and grooming (LG) and arched-back nursing (ABN) by rat mothers altered the offspring epigenome at a glucocorticoid receptor (GR) gene promoter in the hippocampus. Offspring of mothers that showed high levels of LG and ABN were found to have differences in DNA methylation, as compared to offspring of 'low-LG-ABN' mothers. These differences emerged over the first week of life, were reversed with cross-fostering, persisted into adulthood and were associated with altered histone acetylation and transcription factor (NGFI-A) binding to the GR promoter. Central infusion of a histone deacetylase inhibitor removed the group differences in histone acetylation, DNA methylation, NGFI-A binding, GR expression and hypothalamic-pituitary-adrenal (HPA) responses to stress, suggesting a causal relation among epigenomic state, GR expression and the maternal effect on stress responses in the offspring. Thus we show that an epigenomic state of a gene can be established through behavioral programming, and it is potentially reversible.
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            Stability and flexibility of epigenetic gene regulation in mammalian development.

            Wolf Reik (2007)
            During development, cells start in a pluripotent state, from which they can differentiate into many cell types, and progressively develop a narrower potential. Their gene-expression programmes become more defined, restricted and, potentially, 'locked in'. Pluripotent stem cells express genes that encode a set of core transcription factors, while genes that are required later in development are repressed by histone marks, which confer short-term, and therefore flexible, epigenetic silencing. By contrast, the methylation of DNA confers long-term epigenetic silencing of particular sequences--transposons, imprinted genes and pluripotency-associated genes--in somatic cells. Long-term silencing can be reprogrammed by demethylation of DNA, and this process might involve DNA repair. It is not known whether any of the epigenetic marks has a primary role in determining cell and lineage commitment during development.
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              How chromatin-binding modules interpret histone modifications: lessons from professional pocket pickers.

              Histones comprise the major protein component of chromatin, the scaffold in which the eukaryotic genome is packaged, and are subject to many types of post-translational modifications (PTMs), especially on their flexible tails. These modifications may constitute a 'histone code' and could be used to manage epigenetic information that helps extend the genetic message beyond DNA sequences. This proposed code, read in part by histone PTM-binding 'effector' modules and their associated complexes, is predicted to define unique functional states of chromatin and/or regulate various chromatin-templated processes. A wealth of structural and functional data show how chromatin effector modules target their cognate covalent histone modifications. Here we summarize key features in molecular recognition of histone PTMs by a diverse family of 'reader pockets', highlighting specific readout mechanisms for individual marks, common themes and insights into the downstream functional consequences of the interactions. Changes in these interactions may have far-reaching implications for human biology and disease, notably cancer.
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                Author and article information

                Journal
                Drug Deliv
                Drug Deliv
                IDRD
                idrd20
                Drug Delivery
                Taylor & Francis
                1071-7544
                1521-0464
                2018
                24 April 2018
                : 25
                : 1
                : 1033-1043
                Affiliations
                [a ]ENT Institute and Otorhinolaryngology Department of Affiliated Eye and ENT Hospital, Key Laboratory of Hearing Medicine of NHFPC, Shanghai Engineering Research Centre of Cochlear Implant, State Key Laboratory of Medical Neurobiology, Fudan University , Shanghai, China;
                [b ]Department of Otorhinolaryngology Head and Neck Surgery, Affiliated Drum Tower Hospital of Nanjing University Medical School, Research Institution of Otorhinolaryngology, Jiangsu Provincial Key Medical Discipline (Laboratory) , Nanjing, China;
                [c ]Knowshine (Shanghai) Pharmaceuticals Inc , Shanghai, China;
                [d ]Key Laboratory for Developmental Genes and Human Disease, Ministry of Education, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Institute of Life Sciences, Southeast University , Nanjing, China;
                [e ]Co-innovation Center of Neuroregeneration, Nantong University , Nantong, China;
                [f ]Institutes of Biomedical Sciences and The Institutes of Brain Science and the Collaborative Innovation Center for Brain Science, Fudan University , Shanghai, China
                Author notes
                [*]

                These authors contributed equally to this work.

                CONTACT Shan Sun Shansun@ 123456fudan.edu.cn Eye and ENT Hospital, Fudan University , Shanghai, 200031, China;
                Renjie Chai renjiec@ 123456seu.edu.cn Institute of Life Sciences, Southeast University , Nanjing210096, China;
                Huawei Li hwli@ 123456shmu.edu.cn Eye and ENT Hospital, Fudan University , Shanghai200031, China
                Author information
                http://orcid.org/0000-0003-2142-4307
                Article
                1461277
                10.1080/10717544.2018.1461277
                6058728
                30799660
                40a923b4-fbb7-46cd-b577-3e4182b1eb71
                © 2018 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 03 February 2018
                : 26 March 2018
                : 02 April 2018
                Page count
                Pages: 11, Words: 7474
                Funding
                Funded by: National Key R&D Program of China
                Award ID: 2017YFA0103900
                Award ID: 2016YFC0905200
                Award ID: 2015CB965000
                Funded by: National Natural Science Foundation of China 10.13039/501100001809
                Award ID: 81620108005
                Award ID: 81570913
                Award ID: 81500801
                Award ID: 81622013
                Award ID: 81470692 31500852
                Funded by: Natural Science Foundation from Jiangsu Province 10.13039/501100004608
                Award ID: BK20150022]
                Funded by: Nanjing Medical Science and Technique Development Foundation
                Award ID: YKK17064]
                Funded by: Fundamental Research Funds for the Central Universities
                Funded by: Boehringer Ingelheim Pharma GmbH 10.13039/100008349
                Funded by: Yingdong Huo Education Foundation 10.13039/501100003829
                Funding was provided by the National Key R&D Program of China [Nos. 2017YFA0103900, 2016YFC0905200, 2015CB965000], the National Natural Science Foundation of China [Nos. 81620108005, 81570913, 81500801, 81622013, 81470692 31500852], the Pujiang Talents Plan from the Shanghai Municipal Committee of Science and Technology, the Natural Science Foundation from Jiangsu Province [BK20150022], the Nanjing Medical Science and Technique Development Foundation [YKK17064], the Fundamental Research Funds for the Central Universities, Boehringer Ingelheim Pharma GmbH, and the Yingdong Huo Education Foundation.
                Categories
                Research Article

                Pharmacology & Pharmaceutical medicine
                apoptosis,gentamycin,h3k4me2,hair cell,compounds
                Pharmacology & Pharmaceutical medicine
                apoptosis, gentamycin, h3k4me2, hair cell, compounds

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