MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ.

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Abstract

Mathematical morphology (MM) provides many powerful operators for processing 2D and 3D images. However, most MM plugins currently implemented for the popular ImageJ/Fiji platform are limited to the processing of 2D images.

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Journal

Journal ID (iso-abbrev): Bioinformatics

Title: Bioinformatics (Oxford, England)

Publisher: Oxford University Press (OUP)

ISSN (Electronic): 1367-4811

ISSN (Print): 1367-4803

Publication date (Electronic): Nov 15 2016

Volume: 32

Issue: 22

Affiliations

[1 ] UR1268 Biopolymers, Interactions and Assemblies, INRA, Nantes, France.

[2 ] Institut Jean-Pierre Bourgin, INRA, AgroParisTech, CNRS, Université Paris-Saclay, Versailles, Cedex, RD10, 78026, France.

[3 ] UMR782 Food Process Engineering and Microbiology, INRA, AgroParisTech, Thiverval-Grignon, France.

[4 ] Basque Foundation for Science, Ikerbasque, Bilbao, 48013, Spain.

[5 ] Computer Science and Artificial Intelligence Department, Basque Country University (UPV/EHU), Donostia-San Sebastian, 20018, Spain.

[6 ] Donostia International Physics Center (DIPC), Donostia-San Sebastian, 20018, Spain.

[7 ] Sorbonne Universités, UPMC Univ Paris 06, UFR 927, Paris, France.

Article

Publisher Item ID: btw413

DOI: 10.1093/bioinformatics/btw413

PubMed ID: 27412086

SO-VID: 265451bf-9016-4433-aee2-dacd0e6cfbc6

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