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      Monitoring nearshore ecosystem health using Pacific razor clams (Siliqua patula) as an indicator species

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          Abstract

          An emerging approach to ecosystem monitoring involves the use of physiological biomarker analyses in combination with gene transcription assays. For the first time, we employed these tools to evaluate the Pacific razor clam ( Siliqua patula), which is important both economically and ecologically, as a bioindicator species in the northeast Pacific. Our objectives were to (1) develop biomarker and gene transcription assays with which to monitor the health of the Pacific razor clam, (2) acquire baseline biomarker and gene transcription reference ranges for razor clams, (3) assess the relationship between physiological and gene transcription assays and (4) determine if site-level differences were present. Pacific razor clams were collected in July 2015 and 2016 at three sites within each of two national parks in southcentral Alaska. In addition to determining reference ranges, we found differences in biomarker assay and gene transcription results between parks and sites which indicate variation in both large-scale and local environmental conditions. Our intent is to employ these methods to evaluate Pacific razor clams as a bioindicator of nearshore ecosystem health. Links between the results of the biomarker and gene transcription assays were observed that support the applicability of both assays in ecosystem monitoring. However, we recognize the need for controlled studies to examine the range of responses in physiology and gene transcripts to different stressors.

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          Multi-year persistence of the 2014/15 North Pacific marine heatwave

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            Interactions among ecosystem stressors and their importance in conservation.

            Interactions between multiple ecosystem stressors are expected to jeopardize biological processes, functions and biodiversity. The scientific community has declared stressor interactions-notably synergies-a key issue for conservation and management. Here, we review ecological literature over the past four decades to evaluate trends in the reporting of ecological interactions (synergies, antagonisms and additive effects) and highlight the implications and importance to conservation. Despite increasing popularity, and ever-finer terminologies, we find that synergies are (still) not the most prevalent type of interaction, and that conservation practitioners need to appreciate and manage for all interaction outcomes, including antagonistic and additive effects. However, it will not be possible to identify the effect of every interaction on every organism's physiology and every ecosystem function because the number of stressors, and their potential interactions, are growing rapidly. Predicting the type of interactions may be possible in the near-future, using meta-analyses, conservation-oriented experiments and adaptive monitoring. Pending a general framework for predicting interactions, conservation management should enact interventions that are robust to uncertainty in interaction type and that continue to bolster biological resilience in a stressful world.
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              Blue mussels (Mytilus edulis spp.) as sentinel organisms in coastal pollution monitoring: A review.

              The blue mussel (Mytilus spp.) is widely used as a bioindicator for monitoring of coastal water pollution (mussel watch programs). Herein we provide a review of this study field with emphasis on: the suitability of Mytilus spp. as environmental sentinels; uptake and bioaccumulation patterns of key pollutant classes; the use of Mytilus spp. in mussel watch programs; recent trends in Norwegian mussel monitoring; environmental quality standards and background concentrations of key contaminants; pollutant effect biomarkers; confounding factors; particulate contaminants (microplastics, engineered nanomaterials); climate change; harmonization of monitoring procedures; and the use of deployed mussels (transplant caging) in pollution monitoring. Lastly, the overall state of the art of blue mussel pollution monitoring is discussed and some important issues for future research and development are highlighted.
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                Author and article information

                Contributors
                Journal
                PeerJ
                PeerJ
                PeerJ
                PeerJ
                PeerJ
                PeerJ Inc. (San Diego, USA )
                2167-8359
                5 March 2020
                2020
                : 8
                : e8761
                Affiliations
                [1 ]Western Ecological Research Center, U.S. Geological Survey , Davis, CA, USA
                [2 ]Alaska SeaLife Center , Seward, AK, USA
                [3 ]Alaska Science Center, U.S. Geological Survey , Anchorage, AK, USA
                [4 ]Inventory & Monitoring Program, Southwest Alaska Network, National Park Service , Fairbanks, AK, USA
                [5 ]College of Fisheries and Ocean Sciences, Alaska SeaLife Center and University of Alaska Fairbanks , Seward, AK, USA
                [6 ]Ocean Alaska Science and Learning Center, National Park Service , Seward, AK, USA
                [7 ]Department of Natural Resource Management, South Dakota State University , Brookings, SD, USA
                Author information
                http://orcid.org/0000-0002-3672-8277
                Article
                8761
                10.7717/peerj.8761
                7060925
                1b6423d8-5284-47a5-9377-a0c61f73069e
                © 2020 Bowen et al.

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.

                History
                : 19 November 2019
                : 17 February 2020
                Funding
                Funded by: National Park Foundation
                This work was supported by the National Park Foundation. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Conservation Biology
                Ecosystem Science
                Marine Biology
                Zoology

                razor clam (siliqua patula),biomarker,gene expression,ecosystem health

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