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      The Activation of the RIG-I/MDA5 Signaling Pathway upon Influenza D Virus Infection Impairs the Pulmonary Proinflammatory Response Triggered by Mycoplasma bovis Superinfection

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          ABSTRACT

          Concurrent infections with multiple pathogens are often described in cattle with respiratory illness. However, how the host-pathogen interactions influence the clinical outcome has been only partially explored in this species. Influenza D virus (IDV) was discovered in 2011. Since then, IDV has been detected worldwide in different hosts. A significant association between IDV and bacterial pathogens in sick cattle was shown in epidemiological studies, especially with Mycoplasma bovis. In an experimental challenge, IDV aggravated M. bovis-induced pneumonia. However, the mechanisms through which IDV drives an increased susceptibility to bacterial superinfections remain unknown. Here, we used the organotypic lung model precision-cut lung slices to study the interplay between IDV and M. bovis coinfection. Our results show that a primary IDV infection promotes M. bovis superinfection by increasing the bacterial replication and the ultrastructural damages in lung pneumocytes. In our model, IDV impaired the innate immune response triggered by M. bovis by decreasing the expression of several proinflammatory cytokines and chemokines that are important for immune cell recruitment and the bacterial clearance. Stimulations with agonists of cytosolic helicases and Toll-like receptors (TLRs) revealed that a primary activation of RIG-I/MDA5 desensitizes the TLR2 activation, similar to what was observed with IDV infection. The cross talk between these two pattern recognition receptors leads to a nonadditive response, which alters the TLR2-mediated cascade that controls the bacterial infection. These results highlight innate immune mechanisms that were not described for cattle so far and improve our understanding of the bovine host-microbe interactions and IDV pathogenesis.

          IMPORTANCE Since the spread of the respiratory influenza D virus (IDV) infection to the cattle population, the question about the impact of this virus on bovine respiratory disease (BRD) remains still unanswered. Animals affected by BRD are often coinfected with multiple pathogens, especially viruses and bacteria. In particular, viruses are suspected to enhance secondary bacterial superinfections. Here, we use an ex vivo model of lung tissue to study the effects of IDV infection on bacterial superinfections. Our results show that IDV increases the susceptibility to the respiratory pathogen Mycoplasma bovis. In particular, IDV seems to activate immune pathways that inhibit the innate immune response against the bacteria. This may allow M. bovis to increase its proliferation and to delay its clearance from lung tissue. These results suggest that IDV could have a negative impact on the respiratory pathology of cattle.

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          Fiji: an open-source platform for biological-image analysis.

          Fiji is a distribution of the popular open-source software ImageJ focused on biological-image analysis. Fiji uses modern software engineering practices to combine powerful software libraries with a broad range of scripting languages to enable rapid prototyping of image-processing algorithms. Fiji facilitates the transformation of new algorithms into ImageJ plugins that can be shared with end users through an integrated update system. We propose Fiji as a platform for productive collaboration between computer science and biology research communities.
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            Anti-inflammatory compounds parthenolide and Bay 11-7082 are direct inhibitors of the inflammasome.

            Activation of the inflammasome generates the pro-inflammatory cytokines interleukin-1 beta and -18, which are important mediators of inflammation. Abnormal activation of the inflammasome leads to many inflammatory diseases, including gout, silicosis, neurodegeneration, and genetically inherited periodic fever syndromes. Therefore, identification of small molecule inhibitors that target the inflammasome is an important step toward developing effective therapeutics for the treatment of inflammation. Here, we show that the herbal NF-kappaB inhibitory compound parthenolide inhibits the activity of multiple inflammasomes in macrophages by directly inhibiting the protease activity of caspase-1. Additional investigations of other NF-kappaB inhibitors revealed that the synthetic I kappaB kinase-beta inhibitor Bay 11-7082 and structurally related vinyl sulfone compounds selectively inhibit NLRP3 inflammasome activity in macrophages independent of their inhibitory effect on NF-kappaB activity. In vitro assays of the effect of parthenolide and Bay 11-7082 on the ATPase activity of NLRP3 demonstrated that both compounds inhibit the ATPase activity of NLRP3, suggesting that the inhibitory effect of these compounds on inflammasome activity could be mediated in part through their effect on the ATPase activity of NLRP3. Our results thus elucidate the molecular mechanism for the therapeutic anti-inflammatory activity of parthenolide and identify vinyl sulfones as a new class of potential therapeutics that target the NLRP3 inflammasome.
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              Inhibition of pulmonary antibacterial defense by interferon-gamma during recovery from influenza infection.

              Secondary bacterial infection often occurs after pulmonary virus infection and is a common cause of severe disease in humans, yet the mechanisms responsible for this viral-bacterial synergy in the lung are only poorly understood. We now report that pulmonary interferon-gamma (IFN-gamma) produced during T cell responses to influenza infection in mice inhibits initial bacterial clearance from the lung by alveolar macrophages. This suppression of phagocytosis correlates with lung IFN-gamma abundance, but not viral burden, and leads to enhanced susceptibility to secondary pneumococcal infection, which can be prevented by IFN-gamma neutralization after influenza infection. Direct inoculation of IFN-gamma can mimic influenza infection and downregulate the expression of the class A scavenger receptor MARCO on alveolar macrophages. Thus, IFN-gamma, although probably facilitating induction of specific anti-influenza adaptive immunity, suppresses innate protection against extracellular bacterial pathogens in the lung.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                J Virol
                J Virol
                JVI
                Journal of Virology
                American Society for Microbiology (1752 N St., N.W., Washington, DC )
                0022-538X
                1098-5514
                24 January 2023
                February 2023
                24 January 2023
                : 97
                : 2
                : e01423-22
                Affiliations
                [a ] IHAP, Université de Toulouse, INRAE, ENVT, Toulouse, France
                [b ] Centre International de Recherche en Infectiologie – U1111 (Equipe VirPath) – Institut National de la Santé et de la Recherche Médicale, Ecole Normale Supérieure, Lyon, France
                [c ] Centre National de la Recherche Scientifique – UMR5308, Lyon, France
                [d ] Centre d’Imagerie Quantitative Lyon 1, Lyon, France
                [e ] Istituto Zooprofilattico Sperimentale della Lombardia e dell’Emilia Romagna “Bruno Ubertini,” Brescia, Italy
                Emory University School of Medicine
                Author notes

                Mariette F. Ducatez and Gilles Meyer contributed equally to this work.

                The authors declare no conflict of interest.

                Author information
                https://orcid.org/0000-0001-9393-7684
                https://orcid.org/0000-0003-1591-3251
                https://orcid.org/0000-0001-8934-5774
                Article
                01423-22 jvi.01423-22
                10.1128/jvi.01423-22
                9972951
                36692289
                0751ad3c-fd7a-459d-914b-750c3e17fd1a
                Copyright © 2023 Gaudino et al.

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

                History
                : 15 September 2022
                : 21 December 2022
                Page count
                Figures: 9, Tables: 0, Equations: 0, References: 77, Pages: 15, Words: 10612
                Funding
                Funded by: Agence Nationale de la Recherche (ANR), FundRef https://doi.org/10.13039/501100001665;
                Award ID: ANR-21-ICRD-0007
                Award Recipient :
                Funded by: Ecole Nationale Veterinaire de Toulouse;
                Award ID: BQR-2020-ANIMEX
                Award Recipient :
                Funded by: Institut National de la Recherche Agronomique (INRA), FundRef https://doi.org/10.13039/501100006488;
                Award Recipient :
                Funded by: Occitanie Region;
                Award Recipient :
                Categories
                Pathogenesis and Immunity
                pathogenesis-and-host-response, Pathogenesis and Host Response
                Custom metadata
                February 2023

                Microbiology & Virology
                coinfections,mycoplasma,precision-cut lung slices,pcls,cattle,ex vivo,influenza,respiratory viruses

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