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      Environmental DNA evidence of the Critically Endangered smalltooth sawfish, Pristis pectinata , in historically occupied US waters

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          Abstract

          • Formerly common in tropical and subtropical waters of the Atlantic Ocean, the Critically Endangered smalltooth sawfish, Pristis pectinata , underwent severe declines over the past century, restricting population(s) to south and south‐west Florida in the US, and Bahamian waters.

          • Anecdotal evidence (e.g. encounter reports from the public) suggests that P. pectinata have recently been observed in historically occupied US waters; however, no directed surveys have been conducted to verify their extent of occupancy.

          • Here, environmental DNA (eDNA) surveys were used to investigate the occurrence of P. pectinata in three formerly occupied estuaries in US waters. Water samples were collected in the summer from the Indian River Lagoon and Tampa Bay, Florida, in 2018 and 2019, and from Mississippi Sound, Mississippi, in 2018, and screened for target DNA using a highly sensitive Droplet Digital™ polymerase chain reaction assay.

          • Target DNA was detected at four sites in the Indian River Lagoon in 2018 and at one site in 2019 (average concentration: 0.086 copies μl −1; SE = 0.004), but was not detected in either year in Tampa Bay. Target DNA was also detected at three sites near Deer Island in Mississippi Sound in 2018 (average concentration: 0.090 copies μl −1; SE = 0.005). These surveys provide additional lines of evidence that P. pectinata is re‐occurring within two historically occupied estuaries in US waters.

          • More comprehensive eDNA surveys in historically occupied regions, combined with clearly defined post‐survey management actions, can direct additional research and outreach initiatives in emerging priority areas, fostering recovery of this Critically Endangered species.

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          The ecology of environmental DNA and implications for conservation genetics

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            Critical considerations for the application of environmental DNA methods to detect aquatic species

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              Extinction risk and conservation of the world’s sharks and rays

              The rapid expansion of human activities threatens ocean-wide biodiversity. Numerous marine animal populations have declined, yet it remains unclear whether these trends are symptomatic of a chronic accumulation of global marine extinction risk. We present the first systematic analysis of threat for a globally distributed lineage of 1,041 chondrichthyan fishes—sharks, rays, and chimaeras. We estimate that one-quarter are threatened according to IUCN Red List criteria due to overfishing (targeted and incidental). Large-bodied, shallow-water species are at greatest risk and five out of the seven most threatened families are rays. Overall chondrichthyan extinction risk is substantially higher than for most other vertebrates, and only one-third of species are considered safe. Population depletion has occurred throughout the world’s ice-free waters, but is particularly prevalent in the Indo-Pacific Biodiversity Triangle and Mediterranean Sea. Improved management of fisheries and trade is urgently needed to avoid extinctions and promote population recovery. DOI: http://dx.doi.org/10.7554/eLife.00590.001
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                Author and article information

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                Journal
                Aquatic Conservation: Marine and Freshwater Ecosystems
                Aquatic Conservation
                Wiley
                1052-7613
                1099-0755
                January 2022
                December 09 2021
                January 2022
                : 32
                : 1
                : 42-54
                Affiliations
                [1 ] School of Biological, Environmental, and Earth Sciences The University of Southern Mississippi Hattiesburg MS USA
                [2 ] Charlotte Harbor Field Laboratory Fish and Wildlife Research Institute, Florida Fish and Wildlife Conservation Commission Port Charlotte FL USA
                [3 ] Center for Fisheries Research and Development The University of Southern Mississippi Ocean Springs MS USA
                [4 ] Harbor Branch Oceanographic Institute Florida Atlantic University Fort Pierce FL USA
                [5 ] Habitat and Species Conservation Harbor Branch Oceanographic Institute, Florida Fish and Wildlife Conservation Commission Fort Pierce FL USA
                Article
                10.1002/aqc.3721
                01378e04-0d00-4785-b7ae-74ccc5f4da88
                © 2022

                http://onlinelibrary.wiley.com/termsAndConditions#vor

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