1
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Prenatal exome sequencing: A useful tool for the fetal neurologist

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Prenatal exome sequencing (pES) is a promising tool for diagnosing genetic disorders when structural anomalies are detected on prenatal ultrasound. The aim of this study was to investigate the diagnostic yield and clinical impact of pES as an additional modality for fetal neurologists who counsel parents in case of congenital anomalies of the central nervous system (CNS). We assessed 20 pregnancies of 19 couples who were consecutively referred to the fetal neurologist for CNS anomalies. pES had a diagnostic yield of 53% (10/19) with most diagnosed pregnancies having agenesis or hypoplasia of the corpus callosum (7/10). Overall clinical impact was 63% (12/19), of which the pES result aided parental decision making in 55% of cases (6/11), guided perinatal management in 75% of cases (3/4), and was helpful in approving a late termination of pregnancy request in 75% of cases (3/4). Our data suggest that pES had a high diagnostic yield when CNS anomalies are present, although this study is limited by its small sample size. Moreover, pES had substantial clinical impact, which warrants implementation of pES in the routine care of the fetal neurologist in close collaboration with gynecologists and clinical geneticists.

          Abstract

          Related collections

          Most cited references18

          • Record: found
          • Abstract: found
          • Article: not found

          Standards and Guidelines for the Interpretation of Sequence Variants: A Joint Consensus Recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology

          The American College of Medical Genetics and Genomics (ACMG) previously developed guidance for the interpretation of sequence variants. 1 In the past decade, sequencing technology has evolved rapidly with the advent of high-throughput next generation sequencing. By adopting and leveraging next generation sequencing, clinical laboratories are now performing an ever increasing catalogue of genetic testing spanning genotyping, single genes, gene panels, exomes, genomes, transcriptomes and epigenetic assays for genetic disorders. By virtue of increased complexity, this paradigm shift in genetic testing has been accompanied by new challenges in sequence interpretation. In this context, the ACMG convened a workgroup in 2013 comprised of representatives from the ACMG, the Association for Molecular Pathology (AMP) and the College of American Pathologists (CAP) to revisit and revise the standards and guidelines for the interpretation of sequence variants. The group consisted of clinical laboratory directors and clinicians. This report represents expert opinion of the workgroup with input from ACMG, AMP and CAP stakeholders. These recommendations primarily apply to the breadth of genetic tests used in clinical laboratories including genotyping, single genes, panels, exomes and genomes. This report recommends the use of specific standard terminology: ‘pathogenic’, ‘likely pathogenic’, ‘uncertain significance’, ‘likely benign’, and ‘benign’ to describe variants identified in Mendelian disorders. Moreover, this recommendation describes a process for classification of variants into these five categories based on criteria using typical types of variant evidence (e.g. population data, computational data, functional data, segregation data, etc.). Because of the increased complexity of analysis and interpretation of clinical genetic testing described in this report, the ACMG strongly recommends that clinical molecular genetic testing should be performed in a CLIA-approved laboratory with results interpreted by a board-certified clinical molecular geneticist or molecular genetic pathologist or equivalent.
            Bookmark
            • Record: found
            • Abstract: not found
            • Article: not found

            ACMG SF v3.0 list for reporting of secondary findings in clinical exome and genome sequencing: a policy statement of the American College of Medical Genetics and Genomics (ACMG)

              Bookmark
              • Record: found
              • Abstract: not found
              • Article: not found

              Whole-exome sequencing in the evaluation of fetal structural anomalies: a prospective cohort study

                Bookmark

                Author and article information

                Contributors
                c.m.p.c.d.peeters-scholte@lumc.nl
                Journal
                Clin Genet
                Clin Genet
                10.1111/(ISSN)1399-0004
                CGE
                Clinical Genetics
                Blackwell Publishing Ltd (Oxford, UK )
                0009-9163
                1399-0004
                19 October 2021
                January 2022
                : 101
                : 1 ( doiID: 10.1111/cge.v101.1 )
                : 65-77
                Affiliations
                [ 1 ] Department of Clinical Genetics Leiden University Medical Centre Leiden The Netherlands
                [ 2 ] Department of Radiology Leiden University Medical Centre Leiden The Netherlands
                [ 3 ] Department of Obstetrics Leiden University Medical Centre Leiden The Netherlands
                [ 4 ] Department of Neurology Leiden University Medical Centre Leiden The Netherlands
                Author notes
                [*] [* ] Correspondence

                Cacha M. P. C. D. Peeters‐Scholte, K5‐Q, LUMC, Albinusdreef 2, 2333 ZA Leiden, The Netherlands.

                Email: c.m.p.c.d.peeters-scholte@ 123456lumc.nl

                Author information
                https://orcid.org/0000-0003-0557-7530
                https://orcid.org/0000-0002-3982-6868
                Article
                CGE14070
                10.1111/cge.14070
                9297851
                34611884
                feb32a04-dab6-4dab-9117-6c54c1e8f981
                © 2021 The Authors. Clinical Genetics published by John Wiley & Sons Ltd.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited and is not used for commercial purposes.

                History
                : 29 September 2021
                : 18 May 2021
                : 02 October 2021
                Page count
                Figures: 6, Tables: 1, Pages: 13, Words: 7044
                Categories
                Original Article
                Original Articles
                Custom metadata
                2.0
                January 2022
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.1.7 mode:remove_FC converted:20.07.2022

                Genetics
                cns malformation,counseling,exome sequencing,fetal neurology,prenatal
                Genetics
                cns malformation, counseling, exome sequencing, fetal neurology, prenatal

                Comments

                Comment on this article