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      Identification and Characterization of Novel Intracellular α-Xylosidase in Aspergillus oryzae

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      1 , , 2 , 1
      Journal of Applied Glycoscience
      The Japanese Society of Applied Glycoscience
      Aspergillus oryzae, α-xylosidase, glycoside hydrolase family 31, xyloglucan

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          Abstract

          α-Xylosidase releases xylopyranosyl side chains from xyloglucan oligosaccharides and is vital for xyloglucan degradation. Previously, we identified and characterized two α-xylosidases, intracellular AxyA and extracellular AxyB, in Aspergillus oryzae. In this study, we identified a third α-xylosidase, termed AxyC, in A. oryzae. These three A. oryzae α-xylosidases belong to the glycoside hydrolase family 31, but there are clear differences in substrate specificity. Both AxyA and AxyB showed much higher hydrolytic activity toward isoprimeverose (α-D-xylopyranosyl-1,6-glucose) than p-nitrophenyl α-D-xylopyranoside. In contrast, the specific activity of AxyC toward the p-nitrophenyl substrate was approximately 950-fold higher than that toward isoprimeverose. Our study revealed that there are multiple α-xylosidases with different substrate specificities in A. oryzae.

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          Most cited references35

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          The carbohydrate-active enzyme database: functions and literature

          Thirty years have elapsed since the emergence of the classification of carbohydrate-active enzymes in sequence-based families that became the CAZy database over 20 years ago, freely available for browsing and download at  www.cazy.org . In the era of large scale sequencing and high-throughput Biology, it is important to examine the position of this specialist database that is deeply rooted in human curation. The three primary tasks of the CAZy curators are (i) to maintain and update the family classification of this class of enzymes, (ii) to classify sequences newly released by GenBank and the Protein Data Bank and (iii) to capture and present functional information for each family. The CAZy website is updated once a month. Here we briefly summarize the increase in novel families and the annotations conducted during the last 8 years. We present several important changes that facilitate taxonomic navigation, and allow to download the entirety of the annotations. Most importantly we highlight the considerable amount of work that accompanies the analysis and report of biochemical data from the literature.
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            Glycan complexity dictates microbial resource allocation in the large intestine

            The structure of the human gut microbiota is controlled primarily through the degradation of complex dietary carbohydrates, but the extent to which carbohydrate breakdown products are shared between members of the microbiota is unclear. We show here, using xylan as a model, that sharing the breakdown products of complex carbohydrates by key members of the microbiota, such as Bacteroides ovatus, is dependent on the complexity of the target glycan. Characterization of the extensive xylan degrading apparatus expressed by B. ovatus reveals that the breakdown of the polysaccharide by the human gut microbiota is significantly more complex than previous models suggested, which were based on the deconstruction of xylans containing limited monosaccharide side chains. Our report presents a highly complex and dynamic xylan degrading apparatus that is fine-tuned to recognize the different forms of the polysaccharide presented to the human gut microbiota.
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              A BUFFER SOLUTION FOR COLORIMETRIC COMPARISON

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                Author and article information

                Contributors
                matsuzawa.tomohiko@kagawa-u.ac.jp
                Journal
                J Appl Glycosci (1999)
                J Appl Glycosci (1999)
                jag
                Journal of Applied Glycoscience
                The Japanese Society of Applied Glycoscience (Tokyo, JAPAN )
                1344-7882
                1880-7291
                20 December 2023
                2023
                : 70
                : 4
                : 119-125
                Affiliations
                [1] 1 Department of Applied Biological Science, Faculty of Agriculture, Kagawa University
                [2] 2 Research Institute for Sustainable Chemistry, National Institute of Advanced Industrial Science and Technology (AIST)
                Author notes
                Corresponding author (Tel. & Fax. +81-87-891-3088, E-mail: matsuzawa.tomohiko@ 123456kagawa-u.ac.jp ).
                Article
                jag.JAG-2023_0007
                10.5458/jag.jag.JAG-2023_0007
                10792220
                38239767
                fe4a696b-12f8-430f-9a8c-bc4d5b7bec4e
                2023 by The Japanese Society of Applied Glycoscience

                This is an open-access paper distributed under the terms of the Creative Commons Attribution Non-Commercial (by-nc) License (CC-BY-NC4.0: https://creativecommons.org/licenses/by-nc/4.0/).

                History
                : 8 June 2023
                : 3 September 2023
                Categories
                Regular Paper

                aspergillus oryzae,α-xylosidase,glycoside hydrolase family 31,xyloglucan

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