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      17q12 deletion syndrome mouse model shows defects in craniofacial, brain and kidney development, and glucose homeostasis

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          ABSTRACT

          17q12 deletion (17q12Del) syndrome is a copy number variant (CNV) disorder associated with neurodevelopmental disorders and renal cysts and diabetes syndrome (RCAD). Using CRISPR/Cas9 genome editing, we generated a mouse model of 17q12Del syndrome on both inbred (C57BL/6N) and outbred (CD-1) genetic backgrounds. On C57BL/6N, the 17q12Del mice had severe head development defects, potentially mediated by haploinsufficiency of Lhx1, a gene within the interval that controls head development. Phenotypes included brain malformations, particularly disruption of the telencephalon and craniofacial defects. On the CD-1 background, the 17q12Del mice survived to adulthood and showed milder craniofacial and brain abnormalities. We report postnatal brain defects using automated magnetic resonance imaging-based morphometry. In addition, we demonstrate renal and blood glucose abnormalities relevant to RCAD. On both genetic backgrounds, we found sex-specific presentations, with male 17q12Del mice exhibiting higher penetrance and more severe phenotypes. Results from these experiments pinpoint specific developmental defects and pathways that guide clinical studies and a mechanistic understanding of the human 17q12Del syndrome. This mouse mutant represents the first and only experimental model to date for the 17q12 CNV disorder.

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          Abstract

          Summary: We developed a mouse model of 17q12 deletion syndrome, which phenocopies many of the features of the human disorder, including renal dysfunction, craniofacial, glucose homeostasis and brain abnormalities.

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              A reproducible evaluation of ANTs similarity metric performance in brain image registration.

              The United States National Institutes of Health (NIH) commit significant support to open-source data and software resources in order to foment reproducibility in the biomedical imaging sciences. Here, we report and evaluate a recent product of this commitment: Advanced Neuroimaging Tools (ANTs), which is approaching its 2.0 release. The ANTs open source software library consists of a suite of state-of-the-art image registration, segmentation and template building tools for quantitative morphometric analysis. In this work, we use ANTs to quantify, for the first time, the impact of similarity metrics on the affine and deformable components of a template-based normalization study. We detail the ANTs implementation of three similarity metrics: squared intensity difference, a new and faster cross-correlation, and voxel-wise mutual information. We then use two-fold cross-validation to compare their performance on openly available, manually labeled, T1-weighted MRI brain image data of 40 subjects (UCLA's LPBA40 dataset). We report evaluation results on cortical and whole brain labels for both the affine and deformable components of the registration. Results indicate that the best ANTs methods are competitive with existing brain extraction results (Jaccard=0.958) and cortical labeling approaches. Mutual information affine mapping combined with cross-correlation diffeomorphic mapping gave the best cortical labeling results (Jaccard=0.669±0.022). Furthermore, our two-fold cross-validation allows us to quantify the similarity of templates derived from different subgroups. Our open code, data and evaluation scripts set performance benchmark parameters for this state-of-the-art toolkit. This is the first study to use a consistent transformation framework to provide a reproducible evaluation of the isolated effect of the similarity metric on optimal template construction and brain labeling. Copyright © 2010 Elsevier Inc. All rights reserved.
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                Author and article information

                Contributors
                Journal
                Dis Model Mech
                Dis Model Mech
                DMM
                Disease Models & Mechanisms
                The Company of Biologists Ltd
                1754-8403
                1754-8411
                1 December 2022
                13 December 2022
                13 December 2022
                : 15
                : 12
                : dmm049752
                Affiliations
                [ 1 ]Department of Molecular Biology, Cell Biology and Biochemistry, Brown University , Providence, RI 02912, USA
                [ 2 ]Department of Psychiatry and Human Behavior, Warren Alpert Medical School of Brown University , Providence, RI 02912, USA
                [ 3 ]Center for Translational Neuroscience, Carney Institute for Brain Science and Brown Institute for Translational Science, Brown University , Providence, RI 02912, USA
                [ 4 ]Mouse Imaging Centre (MICe), Hospital for Sick Children , Toronto, ON M5T 3H7, Canada
                [ 5 ]Wellcome Centre for Integrative Neuroimaging, The University of Oxford , Oxford OX3 9DU, UK
                Author notes
                [*]

                Present address: National Human Genome Research Institute, National Institutes of Health, Bethesda, MD 20892, USA.

                []Author for correspondence ( eric_morrow@ 123456brown.edu )

                Handling Editor: Monica J. Justice

                Competing interests

                The authors declare no competing or financial interests.

                Author information
                http://orcid.org/0000-0002-3561-3478
                http://orcid.org/0000-0003-0745-9415
                http://orcid.org/0000-0003-1504-3321
                http://orcid.org/0000-0001-6164-2881
                http://orcid.org/0000-0003-3430-3520
                Article
                DMM049752
                10.1242/dmm.049752
                10655816
                36373506
                f96c2218-71da-462e-b3d1-dc85ac3bb0a8
                © 2022. Published by The Company of Biologists Ltd

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( https://creativecommons.org/licenses/by/4.0), which permits unrestricted use, distribution and reproduction in any medium provided that the original work is properly attributed.

                History
                : 8 July 2022
                : 4 November 2022
                Funding
                Funded by: National Institutes of Health, http://dx.doi.org/10.13039/100000002;
                Award ID: T32-MH-019927
                Award ID: R01NS121618
                Award ID: R01NS113141
                Funded by: Autism Science Foundation, http://dx.doi.org/10.13039/100008152;
                Award ID: 19-005
                Funded by: Karen T. Romer;
                Funded by: Hassenfeld Child Health Innovation Institute, http://dx.doi.org/10.13039/100016529;
                Funded by: Carney Institute for Brain Science;
                Funded by: Eagles Autism Foundation, http://dx.doi.org/10.13039/100020288;
                Funded by: Ontario Brain Institute, http://dx.doi.org/10.13039/100008914;
                Funded by: Brown University, http://dx.doi.org/10.13039/100006418;
                Categories
                Research Article

                Molecular medicine
                copy number variants,17q12,neurodevelopmental disorders,head development,forebrain development,renal cysts and diabetes syndrome

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