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      The potential of UAV-borne spectral and textural information for predicting aboveground biomass and N fixation in legume-grass mixtures

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      PLoS ONE
      Public Library of Science

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          Abstract

          Organic farmers, who rely on legumes as an external nitrogen (N) source, need a fast and easy on-the-go measurement technique to determine harvestable biomass and the amount of fixed N (N Fix) for numerous farm management decisions. Especially clover- and lucerne-grass mixtures play an important role in the organic crop rotation under temperate European climate conditions. Multispectral sensors mounted on unmanned aerial vehicles (UAVs) are new promising tools for a non-destructive assessment of crop and grassland traits on large and remote areas. One disadvantage of multispectral information and derived vegetations indices is, that both ignore spatial relationships of pixels to each other in the image. This gap can be filled by texture features from a grey level co-occurrence matrix. The aim of this multi-temporal field study was to provide aboveground biomass and N Fix estimation models for two legume-grass mixtures through a whole vegetation period based on UAV multispectral information. The prediction models covered different proportions of legumes (0–100% legumes) to represent the variable conditions in practical farming. Furthermore, the study compared prediction models with and without the inclusion of texture features. As multispectral data usually suffers from multicollinearity, two machine learning algorithms, Partial Least Square and Random Forest (RF) regression, were used. The results showed, that biomass prediction accuracy for the whole dataset as well as for crop-specific models were substantially improved by the inclusion of texture features. The best model was generated for the whole dataset by RF with an rRMSE of 10%. For N Fix prediction accuracy of the best model was based on RF including texture (rRMSEP = 18%), which was not consistent with crop specific models.

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          Random forest in remote sensing: A review of applications and future directions

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            Combining UAV-based plant height from crop surface models, visible, and near infrared vegetation indices for biomass monitoring in barley

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              Spectral response of a plant canopy with different soil backgrounds

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                Author and article information

                Contributors
                Role: Formal analysisRole: InvestigationRole: MethodologyRole: VisualizationRole: Writing – original draft
                Role: ConceptualizationRole: SupervisionRole: Writing – review & editing
                Role: ConceptualizationRole: SupervisionRole: Writing – review & editing
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                25 June 2020
                2020
                : 15
                : 6
                : e0234703
                Affiliations
                [001]Grassland Science and Renewable Plant Resources, Organic Agricultural Sciences, Universität Kassel, Witzenhausen, Germany
                Institute of Botany of the Czech Academy of Sciences, CZECH REPUBLIC
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                Author information
                http://orcid.org/0000-0002-5015-6738
                http://orcid.org/0000-0003-4608-955X
                Article
                PONE-D-19-34750
                10.1371/journal.pone.0234703
                7316270
                32584839
                f53e0d73-5787-4b3b-a0d5-c841e54756b1
                © 2020 Grüner et al

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

                History
                : 16 December 2019
                : 2 June 2020
                Page count
                Figures: 7, Tables: 2, Pages: 21
                Funding
                The author(s) received no specific funding for this work.
                Categories
                Research Article
                Biology and Life Sciences
                Organisms
                Eukaryota
                Plants
                Legumes
                Biology and Life Sciences
                Organisms
                Eukaryota
                Plants
                Grasses
                Research and Analysis Methods
                Mathematical and Statistical Techniques
                Statistical Methods
                Forecasting
                Physical Sciences
                Mathematics
                Statistics
                Statistical Methods
                Forecasting
                Biology and Life Sciences
                Agriculture
                Crop Science
                Crops
                Physical Sciences
                Mathematics
                Applied Mathematics
                Algorithms
                Machine Learning Algorithms
                Research and Analysis Methods
                Simulation and Modeling
                Algorithms
                Machine Learning Algorithms
                Computer and Information Sciences
                Artificial Intelligence
                Machine Learning
                Machine Learning Algorithms
                Computer and Information Sciences
                Artificial Intelligence
                Machine Learning
                Biology and Life Sciences
                Ecology
                Plant Ecology
                Plant Communities
                Grasslands
                Ecology and Environmental Sciences
                Ecology
                Plant Ecology
                Plant Communities
                Grasslands
                Biology and Life Sciences
                Plant Science
                Plant Ecology
                Plant Communities
                Grasslands
                Ecology and Environmental Sciences
                Terrestrial Environments
                Grasslands
                Biology and Life Sciences
                Agriculture
                Farms
                Custom metadata
                The data set, which is necessary to replicate our study findings is at PANGAEA via gfbio: https://doi.org/10.1594/PANGAEA.914667.

                Uncategorized
                Uncategorized

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