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      Time-frequency analysis methods and their application in developmental EEG data

      research-article
      a , b , c , 1 , * , a , b , 1
      Developmental Cognitive Neuroscience
      Elsevier
      EEG, Time frequency, ERPs, Neural oscillations, Power

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          Abstract

          EEG provides a rich measure of brain activity that can be characterized as neuronal oscillations. However, most developmental EEG work to date has focused on analyzing EEG data as Event-Related Potentials (ERPs) or power based on the Fourier transform. While these measures have been productive, they do not leverage all the information contained within the EEG signal. Namely, ERP analyses ignore non-phase-locked signals and Fourier-based power analyses ignore temporal information. Time-frequency analyses can better characterize the oscillations contained in the EEG data. By separating power and phase information across different frequencies, time-frequency measures provide a closer interpretation of the neurophysiological mechanisms, facilitate translation across neurophysiology disciplines, and capture processes not observed by ERP or Fourier-based analyses (e.g., connectivity). Despite their unique contributions, a literature review of this journal reveals that time-frequency analyses of EEG are yet to be embraced by the developmental cognitive neuroscience field. This manuscript presents a conceptual introduction to time-frequency analyses for developmental researchers. To facilitate the use of time-frequency analyses, we include a tutorial of accessible scripts, based on Cohen (2014), to calculate time-frequency power (signal strength), inter-trial phase synchrony (signal consistency), and two types of phase-based connectivity (inter-channel phase synchrony and weighted phase lag index).

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          Most cited references48

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          EEGLAB: an open source toolbox for analysis of single-trial EEG dynamics including independent component analysis

          We have developed a toolbox and graphic user interface, EEGLAB, running under the crossplatform MATLAB environment (The Mathworks, Inc.) for processing collections of single-trial and/or averaged EEG data of any number of channels. Available functions include EEG data, channel and event information importing, data visualization (scrolling, scalp map and dipole model plotting, plus multi-trial ERP-image plots), preprocessing (including artifact rejection, filtering, epoch selection, and averaging), independent component analysis (ICA) and time/frequency decompositions including channel and component cross-coherence supported by bootstrap statistical methods based on data resampling. EEGLAB functions are organized into three layers. Top-layer functions allow users to interact with the data through the graphic interface without needing to use MATLAB syntax. Menu options allow users to tune the behavior of EEGLAB to available memory. Middle-layer functions allow users to customize data processing using command history and interactive 'pop' functions. Experienced MATLAB users can use EEGLAB data structures and stand-alone signal processing functions to write custom and/or batch analysis scripts. Extensive function help and tutorial information are included. A 'plug-in' facility allows easy incorporation of new EEG modules into the main menu. EEGLAB is freely available (http://www.sccn.ucsd.edu/eeglab/) under the GNU public license for noncommercial use and open source development, together with sample data, user tutorial and extensive documentation.
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            FieldTrip: Open Source Software for Advanced Analysis of MEG, EEG, and Invasive Electrophysiological Data

            This paper describes FieldTrip, an open source software package that we developed for the analysis of MEG, EEG, and other electrophysiological data. The software is implemented as a MATLAB toolbox and includes a complete set of consistent and user-friendly high-level functions that allow experimental neuroscientists to analyze experimental data. It includes algorithms for simple and advanced analysis, such as time-frequency analysis using multitapers, source reconstruction using dipoles, distributed sources and beamformers, connectivity analysis, and nonparametric statistical permutation tests at the channel and source level. The implementation as toolbox allows the user to perform elaborate and structured analyses of large data sets using the MATLAB command line and batch scripting. Furthermore, users and developers can easily extend the functionality and implement new algorithms. The modular design facilitates the reuse in other software packages.
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              Nonparametric statistical testing of EEG- and MEG-data.

              In this paper, we show how ElectroEncephaloGraphic (EEG) and MagnetoEncephaloGraphic (MEG) data can be analyzed statistically using nonparametric techniques. Nonparametric statistical tests offer complete freedom to the user with respect to the test statistic by means of which the experimental conditions are compared. This freedom provides a straightforward way to solve the multiple comparisons problem (MCP) and it allows to incorporate biophysically motivated constraints in the test statistic, which may drastically increase the sensitivity of the statistical test. The paper is written for two audiences: (1) empirical neuroscientists looking for the most appropriate data analysis method, and (2) methodologists interested in the theoretical concepts behind nonparametric statistical tests. For the empirical neuroscientist, a large part of the paper is written in a tutorial-like fashion, enabling neuroscientists to construct their own statistical test, maximizing the sensitivity to the expected effect. And for the methodologist, it is explained why the nonparametric test is formally correct. This means that we formulate a null hypothesis (identical probability distribution in the different experimental conditions) and show that the nonparametric test controls the false alarm rate under this null hypothesis.
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                Author and article information

                Contributors
                Journal
                Dev Cogn Neurosci
                Dev Cogn Neurosci
                Developmental Cognitive Neuroscience
                Elsevier
                1878-9293
                1878-9307
                14 January 2022
                April 2022
                14 January 2022
                : 54
                : 101067
                Affiliations
                [a ]Department of Human Development and Quantitative Methodology, University of Maryland – College Park, USA
                [b ]Neuroscience and Cognitive Science Program, University of Maryland – College Park, USA
                [c ]Department of Psychology, University of Southern California, USA
                Author notes
                [* ]Correspondence to: University of Southern California, 501 Seeley G. Mudd Building, Los Angeles 90089, USA. santiago.morales@ 123456usc.edu
                [1]

                Both authors contributed equally to this manuscript.

                Article
                S1878-9293(22)00011-1 101067
                10.1016/j.dcn.2022.101067
                8784307
                35065418
                ea2cb925-23a9-490b-882b-e02b020f12c6
                © 2022 The Authors. Published by Elsevier Ltd.

                This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

                History
                Categories
                Original Research

                Neurosciences
                eeg,time frequency,erps,neural oscillations,power
                Neurosciences
                eeg, time frequency, erps, neural oscillations, power

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