Contributors
Claire McQuin: Role: ConceptualizationRole: Formal analysisRole: SoftwareRole: Writing – original
draftRole: Writing – review & editing
Allen Goodman: Role: ConceptualizationRole: InvestigationRole: Software
Vasiliy Chernyshev: Role: Data curationRole: InvestigationRole: MethodologyRole: SoftwareRole: ValidationRole:
VisualizationRole: Writing – review & editing
Lee Kamentsky: Role: ConceptualizationRole: Software
Beth A. Cimini: Role: ConceptualizationRole: InvestigationRole: MethodologyRole: Project administrationRole:
SoftwareRole: ValidationRole: Writing – review & editing
Kyle W. Karhohs: Role: InvestigationRole: MethodologyRole: Software
Minh Doan: Role: MethodologyRole: SoftwareRole: Writing – original draftRole: Writing – review
& editing
Liya Ding: Role: Data curationRole: MethodologyRole: SoftwareRole: ValidationRole: Writing –
review & editing
Susanne M. Rafelski: Role: ConceptualizationRole: MethodologyRole: Project administrationRole: ResourcesRole:
SupervisionRole: Writing – review & editing
Derek Thirstrup: Role: Data curationRole: MethodologyRole: SoftwareRole: ValidationRole: Writing –
review & editing
Winfried Wiegraebe: Role: ConceptualizationRole: MethodologyRole: ResourcesRole: Supervision
Shantanu Singh: Role: ResourcesRole: SoftwareRole: Writing – review & editing
Tim Becker: Role: InvestigationRole: SoftwareRole: VisualizationRole: Writing – review & editing
Juan C. Caicedo: Role: SoftwareRole: Writing – review & editing
Anne E. Carpenter: Role: ConceptualizationRole: Funding acquisitionRole: Project administrationRole:
ResourcesRole: SupervisionRole: Writing – original draftRole: Writing – review & editing
Tom Misteli: Role: Academic Editor
Journal
Journal ID (nlm-ta): PLoS Biol
Journal ID (iso-abbrev): PLoS Biol
Journal ID (publisher-id): plos
Journal ID (pmc): plosbiol
Title:
PLoS Biology
Publisher:
Public Library of Science
(San Francisco, CA USA
)
ISSN
(Print):
1544-9173
ISSN
(Electronic):
1545-7885
Publication date
(Electronic):
3
July
2018
Publication date Collection:
July
2018
Publication date PMC-release: 3
July
2018
Volume: 16
Issue: 7
Electronic Location Identifier: e2005970
Affiliations
[1
]
Imaging Platform, Broad Institute of Harvard and MIT, Cambridge, Massachusetts, United
States of America
[2
]
Skolkovo Institute of Science and Technology, Skolkovo, Moscow Region, Russia
[3
]
Moscow Institute of Physics and Technology, Dolgoprudny, Moscow Region, Russia
[4
]
Allen Institute for Cell Science, Seattle, Washington, United States of America
National Cancer Institute, United States of America
Author notes
The authors have declared that no competing interests exist.
Article
Publisher ID:
pbio.2005970
DOI: 10.1371/journal.pbio.2005970
PMC ID: 6029841
PubMed ID: 29969450
SO-VID: e714bbc8-a74e-4a83-9111-c4d506268f2b
Copyright © © 2018 McQuin et al
License:
This is an open access article distributed under the terms of the
Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided
the original author and source are credited.
History
Date
received
: 9
March
2018
Date
accepted
: 25
May
2018
Page count
Figures: 4,
Tables: 0,
Pages: 17
Funding
National Institutes of Health
https://projectreporter.nih.gov/project_info_description.cfm?aid=8761195&icde=39531171&ddparam=&ddvalue=&ddsub=&cr=1&csb=default&cs=ASC&pball= (grant number 2R01GM089652-05A1). Granted to AEC. The funder had no role in study
design, data collection and analysis, decision to publish, or preparation of the manuscript.
National Institutes of Health
https://projectreporter.nih.gov/project_info_description.cfm?aid=9276910&icde=39531212&ddparam=&ddvalue=&ddsub=&cr=1&csb=default&cs=ASC&pball= (grant number 1R35GM122547-01). Granted to AEC. The funder had no role in study design,
data collection and analysis, decision to publish, or preparation of the manuscript.
Allen Institute for Cell Science. Granted to AEC. The funder had no role in study
design, data collection and analysis, decision to publish, or preparation of the manuscript.
Deutsche Forschungsgemeinschaft
http://gepris.dfg.de/gepris/projekt/328668586 (grant number DFG research fellowship 5728). Granted to TB. The funder had no role
in study design, data collection and analysis, decision to publish, or preparation
of the manuscript. Google Accelerated Sciences. Granted to AEC. The funder had no
role in study design, data collection and analysis, decision to publish, or preparation
of the manuscript.
Categories
Subject:
Methods and Resources
Subject:
Engineering and Technology
Subject:
Signal Processing
Subject:
Image Processing
Subject:
Research and Analysis Methods
Subject:
Imaging Techniques
Subject:
Image Analysis
Subject:
Biology and Life Sciences
Subject:
Developmental Biology
Subject:
Embryology
Subject:
Blastocysts
Subject:
Science Policy
Subject:
Science and Technology Workforce
Subject:
Careers in Research
Subject:
Scientists
Subject:
Biologists
Subject:
People and Places
Subject:
Population Groupings
Subject:
Professions
Subject:
Scientists
Subject:
Biologists
Subject:
Research and Analysis Methods
Subject:
Specimen Preparation and Treatment
Subject:
Staining
Subject:
Cell Staining
Subject:
Computer and Information Sciences
Subject:
Computer Software
Subject:
Open Source Software
Subject:
Science Policy
Subject:
Open Science
Subject:
Open Source Software
Subject:
Computer and Information Sciences
Subject:
Software Engineering
Subject:
Software Tools
Subject:
Engineering and Technology
Subject:
Software Engineering
Subject:
Software Tools
Subject:
Physical Sciences
Subject:
Mathematics
Subject:
Applied Mathematics
Subject:
Algorithms
Subject:
Research and Analysis Methods
Subject:
Simulation and Modeling
Subject:
Algorithms
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