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      Simulations of molecular photodynamics in long timescales

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          Abstract

          Nonadiabatic dynamics simulations in the long timescale (much longer than 10 ps) are the next challenge in computational photochemistry. This paper delimits the scope of what we expect from methods to run such simulations: they should work in full nuclear dimensionality, be general enough to tackle any type of molecule and not require unrealistic computational resources. We examine the main methodological challenges we should venture to advance the field, including the computational costs of the electronic structure calculations, stability of the integration methods, accuracy of the nonadiabatic dynamics algorithms and software optimization. Based on simulations designed to shed light on each of these issues, we show how machine learning may be a crucial element for long time-scale dynamics, either as a surrogate for electronic structure calculations or aiding the parameterization of model Hamiltonians. We show that conventional methods for integrating classical equations should be adequate to extended simulations up to 1 ns and that surface hopping agrees semiquantitatively with wave packet propagation in the weak-coupling regime. We also describe our optimization of the Newton-X program to reduce computational overheads in data processing and storage.

          This article is part of the theme issue ‘Chemistry without the Born–Oppenheimer approximation’.

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          Multimode Molecular Dynamics Beyond the Born-Oppenheimer Approximation

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            Molecular dynamics with electronic transitions

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              Machine Learning Force Fields

              In recent years, the use of machine learning (ML) in computational chemistry has enabled numerous advances previously out of reach due to the computational complexity of traditional electronic-structure methods. One of the most promising applications is the construction of ML-based force fields (FFs), with the aim to narrow the gap between the accuracy of ab initio methods and the efficiency of classical FFs. The key idea is to learn the statistical relation between chemical structure and potential energy without relying on a preconceived notion of fixed chemical bonds or knowledge about the relevant interactions. Such universal ML approximations are in principle only limited by the quality and quantity of the reference data used to train them. This review gives an overview of applications of ML-FFs and the chemical insights that can be obtained from them. The core concepts underlying ML-FFs are described in detail, and a step-by-step guide for constructing and testing them from scratch is given. The text concludes with a discussion of the challenges that remain to be overcome by the next generation of ML-FFs.
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                Author and article information

                Contributors
                Journal
                Philos Trans A Math Phys Eng Sci
                Philos Trans A Math Phys Eng Sci
                RSTA
                roypta
                Philosophical transactions. Series A, Mathematical, physical, and engineering sciences
                The Royal Society
                1364-503X
                1471-2962
                May 16, 2022
                March 28, 2022
                March 28, 2022
                : 380
                : 2223 , Theme issue ‘Chemistry without the Born–Oppenheimer approximation’ compiled and edited by Federica Agostini and Basile F. E. Curchod
                : 20200382
                Affiliations
                [ 1 ] Aix Marseille University, , CNRS, ICR, Marseille, France
                [ 2 ] Institut Universitaire de France, , 75231 Paris, France
                Author notes

                One contribution of 11 to a theme issue ‘ Chemistry without the Born–Oppenheimer approximation’.

                Electronic supplementary material is available online at https://doi.org/10.6084/m9.figshare.c.5825747.

                Author information
                http://orcid.org/0000-0002-0025-4735
                http://orcid.org/0000-0002-5120-4172
                http://orcid.org/0000-0002-6689-3919
                http://orcid.org/0000-0001-9336-6607
                Article
                rsta20200382
                10.1098/rsta.2020.0382
                8958277
                35341303
                e30f9043-0f3c-48d9-bd64-3d837701da1e
                © 2022 The Authors.

                Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.

                History
                : June 30, 2021
                : August 12, 2021
                Funding
                Funded by: H2020 European Research Council, http://dx.doi.org/10.13039/100010663;
                Award ID: 832237
                Categories
                1002
                45
                149
                150
                Articles
                Research Articles
                Custom metadata
                May 16, 2022

                theoretical chemistry,excited states,nonadiabatic phenomena,dynamics simulations,photochemistry,computational chemistry

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