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      Moving Towards Induced Pluripotent Stem Cell-based Therapies with Artificial Intelligence and Machine Learning

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          Abstract

          The advent of induced pluripotent stem cell (iPSC) technology, which allows to transform one cell type into another, holds the promise to produce therapeutic cells and organs on demand. Realization of this objective is contingent on the ability to demonstrate quality and safety of the cellular product for its intended use. Bottlenecks and backlogs to the clinical use of iPSCs have been fully outlined and a need has emerged for safer and standardized protocols to trigger cell reprogramming and functional differentiation. Amidst great challenges, in particular associated with lengthy culture time and laborious cell characterization, a demand for faster and more accurate methods for the validation of cell identity and function at different stages of the iPSC manufacturing process has risen. Artificial intelligence-based methods are proving helpful for these complex tasks and might revolutionize the way iPSCs are managed to create surrogate cells and organs. Here, we briefly review recent progress in artificial intelligence approaches for evaluation of iPSCs and their derivatives in experimental studies.

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            Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

            Differentiated cells can be reprogrammed to an embryonic-like state by transfer of nuclear contents into oocytes or by fusion with embryonic stem (ES) cells. Little is known about factors that induce this reprogramming. Here, we demonstrate induction of pluripotent stem cells from mouse embryonic or adult fibroblasts by introducing four factors, Oct3/4, Sox2, c-Myc, and Klf4, under ES cell culture conditions. Unexpectedly, Nanog was dispensable. These cells, which we designated iPS (induced pluripotent stem) cells, exhibit the morphology and growth properties of ES cells and express ES cell marker genes. Subcutaneous transplantation of iPS cells into nude mice resulted in tumors containing a variety of tissues from all three germ layers. Following injection into blastocysts, iPS cells contributed to mouse embryonic development. These data demonstrate that pluripotent stem cells can be directly generated from fibroblast cultures by the addition of only a few defined factors.
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                Author and article information

                Contributors
                mgfrancipane@fondazionerimed.com
                Journal
                Stem Cell Rev Rep
                Stem Cell Rev Rep
                Stem Cell Reviews and Reports
                Springer US (New York )
                2629-3269
                2629-3277
                29 November 2021
                29 November 2021
                2022
                : 18
                : 2
                : 559-569
                Affiliations
                [1 ]GRID grid.511463.4, ISNI 0000 0004 7858 937X, Advanced Data Analysis Group, , Fondazione Ri.MED, ; 90133 Palermo, Italy
                [2 ]GRID grid.511463.4, ISNI 0000 0004 7858 937X, Regenerative Medicine Group, , Fondazione Ri.MED, ; 90133 Palermo, Italy
                [3 ]GRID grid.21925.3d, ISNI 0000 0004 1936 9000, McGowan Institute for Regenerative Medicine, , University of Pittsburgh, ; Pittsburgh, PA 15232 USA
                Author information
                http://orcid.org/0000-0002-7194-7918
                Article
                10302
                10.1007/s12015-021-10302-y
                8930923
                34843066
                df9b07aa-f739-4c24-b889-31c40a13d07b
                © The Author(s) 2021

                Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 13 November 2021
                Funding
                Funded by: fondazione ri.med
                Award ID: fondazione ri.med
                Award Recipient :
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                © Springer Science+Business Media, LLC, part of Springer Nature 2022

                induced pluripotent stem cells,regenerative medicine,quality control,artificial intelligence,machine learning,deep learning

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