25
views
0
recommends
+1 Recommend
0 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      The Key to the Future Lies in the Past: Insights from Grain Legume Domestication and Improvement Should Inform Future Breeding Strategies

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          Crop domestication is a co-evolutionary process that has rendered plants and animals significantly dependent on human interventions for survival and propagation. Grain legumes have played an important role in the development of Neolithic agriculture some 12,000 years ago. Despite being early companions of cereals in the origin and evolution of agriculture, the understanding of grain legume domestication has lagged behind that of cereals. Adapting plants for human use has resulted in distinct morpho-physiological changes between the wild ancestors and domesticates, and this distinction has been the focus of several studies aimed at understanding the domestication process and the genetic diversity bottlenecks created. Growing evidence from research on archeological remains, combined with genetic analysis and the geographical distribution of wild forms, has improved the resolution of the process of domestication, diversification and crop improvement. In this review, we summarize the significance of legume wild relatives as reservoirs of novel genetic variation for crop breeding programs. We describe key legume features, which evolved in response to anthropogenic activities. Here, we highlight how whole genome sequencing and incorporation of omics-level data have expanded our capacity to monitor the genetic changes accompanying these processes. Finally, we present our perspective on alternative routes centered on de novo domestication and re-domestication to impart significant agronomic advances of novel crops over existing commodities. A finely resolved domestication history of grain legumes will uncover future breeding targets to develop modern cultivars enriched with alleles that improve yield, quality and stress tolerance.

          Related collections

          Most cited references215

          • Record: found
          • Abstract: found
          • Article: not found

          Evolution of crop species: genetics of domestication and diversification.

          Domestication is a good model for the study of evolutionary processes because of the recent evolution of crop species (<12,000 years ago), the key role of selection in their origins, and good archaeological and historical data on their spread and diversification. Recent studies, such as quantitative trait locus mapping, genome-wide association studies and whole-genome resequencing studies, have identified genes that are associated with the initial domestication and subsequent diversification of crops. Together, these studies reveal the functions of genes that are involved in the evolution of crops that are under domestication, the types of mutations that occur during this process and the parallelism of mutations that occur in the same pathways and proteins, as well as the selective forces that are acting on these mutations and that are associated with geographical adaptation of crop species.
            Bookmark
            • Record: found
            • Abstract: found
            • Article: not found

            Resequencing of 31 wild and cultivated soybean genomes identifies patterns of genetic diversity and selection.

            We report a large-scale analysis of the patterns of genome-wide genetic variation in soybeans. We re-sequenced a total of 17 wild and 14 cultivated soybean genomes to an average of approximately ×5 depth and >90% coverage using the Illumina Genome Analyzer II platform. We compared the patterns of genetic variation between wild and cultivated soybeans and identified higher allelic diversity in wild soybeans. We identified a high level of linkage disequilibrium in the soybean genome, suggesting that marker-assisted breeding of soybean will be less challenging than map-based cloning. We report linkage disequilibrium block location and distribution, and we identified a set of 205,614 tag SNPs that may be useful for QTL mapping and association studies. The data here provide a valuable resource for the analysis of wild soybeans and to facilitate future breeding and quantitative trait analysis.
              Bookmark
              • Record: found
              • Abstract: found
              • Article: not found

              Plant productivity and environment.

              J. Boyer (1982)
              An analysis of major U.S. crops shows that there is a large genetic potential for yield that is unrealized because of the need for better adaptation of the plants to the environments in which they are grown. Evidence from native populations suggests that high productivity can occur in these environments and that opportunities for improving production in unfavorable environments are substantial. Genotypic selection for adaptation to such environments has already played an important role in agriculture, but the fundamental mechanisms are poorly understood. Recent scientific advances make exploration of these mechanisms more feasible and could result in large gains in productivity.
                Bookmark

                Author and article information

                Contributors
                Journal
                Plant Cell Physiol
                Plant Cell Physiol
                pcp
                Plant and Cell Physiology
                Oxford University Press (UK )
                0032-0781
                1471-9053
                November 2022
                17 June 2022
                17 June 2022
                : 63
                : 11
                : 1554-1572
                Affiliations
                departmentState Agricultural Biotechnology Centre, Centre for Crop and Food Innovation, Food Futures Institute, Murdoch University , 90 South Street, Murdoch, WA 6150, Australia
                Crop Improvement Division , ICAR-Indian Institute of Pulses Research (ICAR-IIPR), Kalyanpur, Kanpur 208024, India
                departmentUWA School of Agriculture and Environment, The University of Western Australia , 35 Stirling Hwy, Crawley, WA 6009, Australia
                departmentDepartment of Biotechnology, Visva-Bharati , Santiniketan, Santiniketan Road, Bolpur 731235, India
                departmentKey Laboratory of Ministry of Education for Genetics, Breeding and Multiple Utilization of Crops, Center of Legume Crop Genetics and Systems Biology/College of Agriculture, Oil Crops Research Institute , Fujian Agriculture and Forestry University (FAFU), Fuzhou 350002, China
                departmentKhalifa Center for Genetic Engineering and Biotechnology (KCGEB), UAE University, Sheik Khalifa Bin Zayed Street , Al Ain, Abu Dhabi 15551, UAE
                departmentDivision of Genetics & Plant Breeding, Faculty of Agriculture, SKUAST, Shalimar , Srinagar 190025, India
                departmentDepartment of Molecular Physiology, Max-Planck-Institute of Molecular Plant Physiology , Am Mühlenberg 1, Potsdam-Golm 14476, Germany
                departmentDepartment of Botany, Faculty of Sciences, Palacky University, Křížkovského 511/8 , Olomouc 78371, Czech Republic
                departmentState Agricultural Biotechnology Centre, Centre for Crop and Food Innovation, Food Futures Institute, Murdoch University , 90 South Street, Murdoch, WA 6150, Australia
                Author notes
                *Corresponding author: E-mail, rajeev.varshney@ 123456murdoch.edu.au
                Author information
                https://orcid.org/0000-0001-6595-281X
                https://orcid.org/0000-0001-9000-335X
                https://orcid.org/0000-0002-4562-9131
                Article
                pcac086
                10.1093/pcp/pcac086
                9680861
                35713290
                db9e101e-29ee-475c-8e7d-24ffd2eee8b0
                © The Author(s) 2022. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution License ( https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

                History
                : 07 March 2022
                : 09 June 2022
                : 15 June 2022
                : 13 June 2022
                : 26 July 2022
                Page count
                Pages: 19
                Funding
                Funded by: Food Future Institute, Murdoch University;
                Categories
                Special Issue–Review
                AcademicSubjects/SCI01210
                AcademicSubjects/SCI01180

                Plant science & Botany
                crop wild relatives,diversification,domestication,genes,grain legumes,selective sweeps

                Comments

                Comment on this article