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      Selective Inhibition of Plasmodium falciparum ATPase 6 by Artemisinins and Identification of New Classes of Inhibitors after Expression in Yeast

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          ABSTRACT

          Treatment failures with artemisinin combination therapies (ACTs) threaten global efforts to eradicate malaria. They highlight the importance of identifying drug targets and new inhibitors and of studying how existing antimalarial classes work. Here, we report the successful development of a heterologous expression-based compound-screening tool. The validated drug target Plasmodium falciparum ATPase 6 (PfATP6) and a mammalian orthologue (sarco/endoplasmic reticulum calcium ATPase 1a [SERCA1a]) were functionally expressed in Saccharomyces cerevisiae, providing a robust, sensitive, and specific screening tool. Whole-cell and in vitro assays consistently demonstrated inhibition and labeling of PfATP6 by artemisinins. Mutations in PfATP6 resulted in fitness costs that were ameliorated in the presence of artemisinin derivatives when studied in the yeast model. As previously hypothesized, PfATP6 is a target of artemisinins. Mammalian SERCA1a can be mutated to become more susceptible to artemisinins. The inexpensive, low-technology yeast screening platform has identified unrelated classes of druggable PfATP6 inhibitors. Resistance to artemisinins may depend on mechanisms that can concomitantly address multitargeting by artemisinins and fitness costs of mutations that reduce artemisinin susceptibility.

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          A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays.

          The ability to identify active compounds (³hits²) from large chemical libraries accurately and rapidly has been the ultimate goal in developing high-throughput screening (HTS) assays. The ability to identify hits from a particular HTS assay depends largely on the suitability or quality of the assay used in the screening. The criteria or parameters for evaluating the ³suitability² of an HTS assay for hit identification are not well defined and hence it still remains difficult to compare the quality of assays directly. In this report, a screening window coefficient, called ³Z-factor,² is defined. This coefficient is reflective of both the assay signal dynamic range and the data variation associated with the signal measurements, and therefore is suitable for assay quality assessment. The Z-factor is a dimensionless, simple statistical characteristic for each HTS assay. The Z-factor provides a useful tool for comparison and evaluation of the quality of assays, and can be utilized in assay optimization and validation.
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            Quantitative assessment of antimalarial activity in vitro by a semiautomated microdilution technique.

            A rapid, semiautomated microdilution method was developed for measuring the activity of potential antimalarial drugs against cultured intraerythrocytic asexual forms of the human malaria parasite Plasmodium falciparum. Microtitration plates were used to prepare serial dilutions of the compounds to be tested. Parasites, obtained from continuous stock cultures, were subcultured in these plates for 42 h. Inhibition of uptake of a radiolabeled nucleic acid precursor by the parasites served as the indicator of antimalarial activity. Results of repeated measurements of activity with chloroquine, quinine, and the investigational new drug mefloquine demonstrated that the method is sensitive and precise. Several additional antimalarial drugs and compounds of interest were tested in vitro, and the results were consistent with available in vivo data. The use of P. falciparum isolates with known susceptibility to antimalarial drugs also permitted evaluation of the cross-resistance potential of each compound tested. The applications and expectations of this new test system within a drug development program are discussed.
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              Haem-activated promiscuous targeting of artemisinin in Plasmodium falciparum

              The mechanism of action of artemisinin and its derivatives, the most potent of the anti-malarial drugs, is not completely understood. Here we present an unbiased chemical proteomics analysis to directly explore this mechanism in Plasmodium falciparum. We use an alkyne-tagged artemisinin analogue coupled with biotin to identify 124 artemisinin covalent binding protein targets, many of which are involved in the essential biological processes of the parasite. Such a broad targeting spectrum disrupts the biochemical landscape of the parasite and causes its death. Furthermore, using alkyne-tagged artemisinin coupled with a fluorescent dye to monitor protein binding, we show that haem, rather than free ferrous iron, is predominantly responsible for artemisinin activation. The haem derives primarily from the parasite's haem biosynthesis pathway at the early ring stage and from haemoglobin digestion at the latter stages. Our results support a unifying model to explain the action and specificity of artemisinin in parasite killing.
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                Author and article information

                Contributors
                Journal
                Antimicrob Agents Chemother
                Antimicrob Agents Chemother
                AAC
                Antimicrobial Agents and Chemotherapy
                American Society for Microbiology (1752 N St., N.W., Washington, DC )
                0066-4804
                1098-6596
                25 April 2022
                May 2022
                25 April 2022
                : 66
                : 5
                : e02079-21
                Affiliations
                [a ] Institute for Infection and Immunity, St. George’s, University of London, London, United Kingdom
                [b ] Department of Biological Sciences, National University of Singaporegrid.4280.e, , Singapore, Singapore
                [c ] Microbiology and Infection Research Domain, Life and Health Sciences Research Institute, School of Medicine, University of Minho, Campus de Gualtar, Braga, Portugal
                [d ] University of Mississippi, School of Pharmacy, Department of BioMolecular Sciences, Division of Medicinal Chemistry, Oxford, Mississippi, USA
                [e ] Institute for Computational Molecular Science, Temple University, Philadelphia, Pennsylvania, USA
                [f ] Department of Chemistry, Temple University, Philadelphia, Pennsylvania, USA
                [g ] St. George’s University Hospitals National Health Services Foundation Trust, London, United Kingdom
                [h ] Universitätsklinikum Tübingen, Tübingen, Germany
                Author notes

                The authors declare no conflict of interest.

                Author information
                https://orcid.org/0000-0001-6678-6999
                https://orcid.org/0000-0003-0066-0634
                Article
                02079-21 aac.02079-21
                10.1128/aac.02079-21
                9112895
                35465707
                d635d019-323f-4514-8d68-afab946a2ecf
                Copyright © 2022 Moore et al.

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.

                History
                : 27 October 2021
                : 13 December 2021
                : 13 March 2022
                Page count
                Figures: 5, Tables: 2, Equations: 0, References: 56, Pages: 15, Words: 9931
                Funding
                Funded by: European community's seventh framework programme;
                Award ID: 304948
                Award Recipient : Award Recipient :
                Funded by: Wellcome Trust Institutional Strategic Support Fund;
                Award ID: 204809/Z/16/Z
                Award Recipient :
                Categories
                Mechanisms of Action: Physiological Effects
                antimicrobial-chemotherapy, Antimicrobial Chemotherapy
                Custom metadata
                May 2022

                Infectious disease & Microbiology
                saccharomyces cerevisiae,antimalarial agents,drug discovery,drug resistance mechanisms,drug screening,mechanisms of action

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