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      Gradients of connectivity as graph Fourier bases of brain activity

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          Abstract

          The application of graph theory to model the complex structure and function of the brain has shed new light on its organization, prompting the emergence of network neuroscience. Despite the tremendous progress that has been achieved in this field, still relatively few methods exploit the topology of brain networks to analyze brain activity. Recent attempts in this direction have leveraged on the one hand graph spectral analysis (to decompose brain connectivity into eigenmodes or gradients) and the other graph signal processing (to decompose brain activity “coupled to” an underlying network in graph Fourier modes). These studies have used a variety of imaging techniques (e.g., fMRI, electroencephalography, diffusion-weighted and myelin-sensitive imaging) and connectivity estimators to model brain networks. Results are promising in terms of interpretability and functional relevance, but methodologies and terminology are variable. The goals of this paper are twofold. First, we summarize recent contributions related to connectivity gradients and graph signal processing, and attempt a clarification of the terminology and methods used in the field, while pointing out current methodological limitations. Second, we discuss the perspective that the functional relevance of connectivity gradients could be fruitfully exploited by considering them as graph Fourier bases of brain activity.

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          The organization of the human cerebral cortex estimated by intrinsic functional connectivity.

          Information processing in the cerebral cortex involves interactions among distributed areas. Anatomical connectivity suggests that certain areas form local hierarchical relations such as within the visual system. Other connectivity patterns, particularly among association areas, suggest the presence of large-scale circuits without clear hierarchical relations. In this study the organization of networks in the human cerebrum was explored using resting-state functional connectivity MRI. Data from 1,000 subjects were registered using surface-based alignment. A clustering approach was employed to identify and replicate networks of functionally coupled regions across the cerebral cortex. The results revealed local networks confined to sensory and motor cortices as well as distributed networks of association regions. Within the sensory and motor cortices, functional connectivity followed topographic representations across adjacent areas. In association cortex, the connectivity patterns often showed abrupt transitions between network boundaries. Focused analyses were performed to better understand properties of network connectivity. A canonical sensory-motor pathway involving primary visual area, putative middle temporal area complex (MT+), lateral intraparietal area, and frontal eye field was analyzed to explore how interactions might arise within and between networks. Results showed that adjacent regions of the MT+ complex demonstrate differential connectivity consistent with a hierarchical pathway that spans networks. The functional connectivity of parietal and prefrontal association cortices was next explored. Distinct connectivity profiles of neighboring regions suggest they participate in distributed networks that, while showing evidence for interactions, are embedded within largely parallel, interdigitated circuits. We conclude by discussing the organization of these large-scale cerebral networks in relation to monkey anatomy and their potential evolutionary expansion in humans to support cognition.
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            Complex brain networks: graph theoretical analysis of structural and functional systems.

            Recent developments in the quantitative analysis of complex networks, based largely on graph theory, have been rapidly translated to studies of brain network organization. The brain's structural and functional systems have features of complex networks--such as small-world topology, highly connected hubs and modularity--both at the whole-brain scale of human neuroimaging and at a cellular scale in non-human animals. In this article, we review studies investigating complex brain networks in diverse experimental modalities (including structural and functional MRI, diffusion tensor imaging, magnetoencephalography and electroencephalography in humans) and provide an accessible introduction to the basic principles of graph theory. We also highlight some of the technical challenges and key questions to be addressed by future developments in this rapidly moving field.
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              Laplacian Eigenmaps for Dimensionality Reduction and Data Representation

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                Author and article information

                Contributors
                Journal
                Netw Neurosci
                Netw Neurosci
                netn
                Network Neuroscience
                MIT Press (One Rogers Street, Cambridge, MA 02142-1209USAjournals-info@mit.edu )
                2472-1751
                2021
                2021
                : 5
                : 2
                : 322-336
                Affiliations
                [1]IMT Atlantique, Brest, France
                [2]IMT Atlantique, Brest, France
                [3]INSERM, Laboratoire Traitement du Signal et de l’Image (LTSI) U1099, University of Rennes, Rennes, France
                [4]IMT Atlantique, Brest, France
                [5]IMT Atlantique, Brest, France
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                Handling Editor: Olaf Sporns

                Author information
                https://orcid.org/0000-0002-8327-9814
                Article
                netn_a_00183
                10.1162/netn_a_00183
                8233110
                34189367
                d0588c53-935a-42c3-8d67-ede7e9f6c68e
                © 2021 Massachusetts Institute of Technology

                This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. For a full description of the license, please visit https://creativecommons.org/licenses/by/4.0/legalcode.

                History
                : 19 September 2020
                : 05 January 2021
                Page count
                Pages: 15
                Funding
                Funded by: Région Bretagne, DOI http://dx.doi.org/10.13039/501100011697;
                Award ID: SAD-2019
                Categories
                Perspective
                Custom metadata
                Lioi, G., Gripon, V., Brahim, A., Rousseau, F., & Farrugia, N. (2021). Gradients of connectivity as graph Fourier bases of brain activity. Network Neuroscience, 5(2), 322–336. https://doi.org/10.1162/netn_a_00183

                graph signal processing,connectivity gradients,graph fourier transform,laplacian,network neuroscience,neuroimaging

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