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      The methyl donor S-adenosylmethionine prevents liver hypoxia and dysregulation of mitochondrial bioenergetic function in a rat model of alcohol-induced fatty liver disease

      research-article
      a , 1 , 2 , a , 1 , a , a , b , b , 3 , c , c , a , b , *
      Redox Biology
      Elsevier
      ALT, alanine aminotransferase, CN-PAGE, clear native polyacrylamide gel electrophoresis, CsA, cyclosporin A, GSH, glutathione, HIF1α, hypoxia-inducible factor 1 alpha, iNOS, inducible nitric oxide synthase, MPT, mitochondrial permeability transition, NO, nitric oxide, ONOO-, peroxynitrite, RCR, respiratory control ratio, RNS, reactive nitrogen species, ROS, reactive oxygen species, SAM, S-adenosylmethionine, O2•-, superoxide anion, Liver, Alcohol, S-Adenosylmethionine, Mitochondria, Hypoxia, Nitric oxide

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          Abstract

          Background

          Mitochondrial dysfunction and bioenergetic stress play an important role in the etiology of alcoholic liver disease. Previous studies from our laboratory show that the primary methyl donor S-Adenosylmethionine (SAM) minimizes alcohol-induced disruptions in several mitochondrial functions in the liver. Herein, we expand on these earlier observations to determine whether the beneficial actions of SAM against alcohol toxicity extend to changes in the responsiveness of mitochondrial respiration to inhibition by nitric oxide (NO), induction of the mitochondrial permeability transition (MPT) pore, and the hypoxic state of the liver.

          Methods

          For this, male Sprague-Dawley rats were pair-fed control and alcohol-containing liquid diets with and without SAM for 5 weeks and liver hypoxia, mitochondrial respiration, MPT pore induction, and NO-dependent control of respiration were examined.

          Results

          Chronic alcohol feeding significantly enhanced liver hypoxia, whereas SAM supplementation attenuated hypoxia in livers of alcohol-fed rats. SAM supplementation prevented alcohol-mediated decreases in mitochondrial state 3 respiration and cytochrome c oxidase activity. Mitochondria isolated from livers of alcohol-fed rats were more sensitive to calcium-mediated MPT pore induction ( i.e., mitochondrial swelling) than mitochondria from pair-fed controls, whereas SAM treatment normalized sensitivity for calcium-induced swelling in mitochondria from alcohol-fed rats. Liver mitochondria from alcohol-fed rats showed increased sensitivity to NO-dependent inhibition of respiration compared with pair-fed controls. In contrast, mitochondria isolated from the livers of SAM treated alcohol-fed rats showed no change in the sensitivity to NO-mediated inhibition of respiration.

          Conclusion

          Collectively, these findings indicate that the hepato-protective effects of SAM against alcohol toxicity are mediated, in part, through a mitochondrial mechanism involving preservation of key mitochondrial bioenergetic parameters and the attenuation of hypoxic stress.

          Graphical abstract

          Highlights

          • Rats were fed control and alcohol diets± S-Adenosylmethionine (SAM) for 5 weeks.

          • SAM prevented alcohol-induced liver hypoxia.

          • SAM normalized mitochondrial respiration in alcohol-fed rats.

          • SAM normalized sensitivity to undergo the mitochondrial permeability transition in alcohol-fed rats.

          • SAM normalized nitric oxide-mediated respiratory inhibition in alcohol-fed rats.

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          Most cited references65

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          The Preventable Causes of Death in the United States: Comparative Risk Assessment of Dietary, Lifestyle, and Metabolic Risk Factors

          Introduction Valid and comparable information on mortality caused by diseases, injuries, and their modifiable risk factors is important for health policy and priority setting [1],[2]. The standard death certificate is valuable for assigning deaths to specific diseases or injuries, but does not provide information on the modifiable risk factors that cause these diseases. Previous research has indicated that modifiable risk factors are responsible for a large number of premature deaths in the United States [1],[3]. However, prior analyses did not use consistent and comparable methods for the mortality effects of different risk factors. More importantly, previous analyses did not include any dietary risk factors. The only metabolic risk factor—i.e., those measured by physiological indicators such as blood pressure, blood glucose, serum cholesterol, and body mass index (BMI)—in these analyses was overweight–obesity. We estimated the number of deaths attributable to major dietary, lifestyle, and metabolic risk factors in the US using consistent, comparable, and current definitions, methods, and data sources. We conducted the analysis in the US because the results can inform priority-setting decisions for policies and programs that aim to improve the nation's health, e.g., Healthy People 2010 and (the forthcoming) Healthy People 2020. The US also has high-quality data on disease-specific mortality and on population exposure to a range of risk factors from nationally representative health examination and interview surveys. Our results provide, to our knowledge, the most comprehensive and comparable quantitative assessment of the mortality burden of important modifiable risk factors in the US population, and the only one to include the effects of multiple dietary and metabolic factors. Methods We conducted a population-level CRA (comparative risk assessment) for 12 major modifiable dietary, lifestyle, and metabolic risks. The CRA analysis estimates the number of deaths that would be prevented in the period of analysis if current distributions of risk factor exposure were changed to a hypothetical alternative distribution. The inputs to the analysis are (1) the current population distribution of risk factor exposure, (2) the etiological effect of risk factor exposures on disease-specific mortality, (3) an alternative exposure distribution, and (4) the total number of disease-specific deaths in the population. 10.1371/journal.pmed.1000058.t001 Table 1 Risk factors in this analysis, their exposure variables, theoretical-minimum-risk exposure distributions, disease outcomes, and data sources for exposure. Risk Factor Exposure Metric Exposure Data Sources TMRED±SD Disease Outcomesa High blood glucose Usual level of fasting plasma glucose [61] NHANES 2003–2006 (SD corrected for intra-individual variation) 4.9±0.3 mmol/l [61] IHD; stroke; renal failure; colorectal, breast, and pancreatic cancers High LDL cholesterol b Usual level of LDL cholesterol NHANES 2003–2006 (SD corrected for intra-individual variation) 2.0±0.44 mmol/lc [62] IHD; ischemic stroke; selected other cardiovascular diseases High blood pressure Usual level of systolic blood pressure NHANES 2003–2006 (SD corrected for intra-individual variation) 115±6 mmHg [63], [64] IHD, stroke, hypertensivedisease, other cardiovascular diseasesd, renal failure Overweight–obesity (high BMI) BMI NHANES 2003–2006 21±1 kg/m2 [21], [65] IHD; ischemic stroke; hypertensive disease; diabetes mellitus; corpus uteri, colon, kidney, and postmenopausal breast cancers; gallbladder cancer e High dietary trans fatty acids Usual percent of total calories from dietary trans fatty acids CSFII 1989–1991f 0.5%±0.05% of total calories from trans fatty acids [16] IHD Low dietary poly-unsaturated fatty acids (PUFA) (in replacement of saturated fatty acids; see Table 2 ) Usual percent of total calories from dietary PUFA NHANES 2003–2006 10%±1% of total calories from PUFA IHD, stroke Low dietary omega-3 fatty acids (seafood) Usual dietary omega-3 fatty acids in five categories adjusted for total caloriesg NHANES 2003–2006 250 mg/d [31] IHD, stroke High dietary salt (sodium) h Usual level of dietary sodium adjusted for total calories NHANES 2003–2006 0.5±0.05 g/d [66] IHD, stroke, hypertensivedisease, other cardiovascular diseases, stomach cancer, renal failure Low intake of fruits and vegetables Usual dietary fruit and vegetable intake adjusted for total caloriesi NHANES 2003–2006 600±50 g/d [67] IHD; ischemic stroke; colorectal, stomach, lung, esophagus, mouth, and pharyngeal cancers Alcohol use Current alcohol consumption volumes and patternsj; prevalence of alcohol use among emergency room patients; BAC levels of drivers in road traffic injuries NESARC 2001–2002, FARS 2005 and emergency room studies No alcohol usek IHD; ischemic stroke; hemorrhagic stroke; hypertensive disease; cardiac arrhythmias; diabetes mellitus; liver, mouth, and pharynx, larynx, breast, esophagus, colorectal, selected other cancersl; liver cirrhosis; acute and chronic pancreatitis; road traffic injuries; falls; homicide and suicide; other injuries; alcohol use disordersm; selected other cardiovascular diseases; hepatitis C; epilepsy; fetal effects of alcohol use during pregnancy; tuberculosis Physical inactivity Physical activity measured in four categories: inactive, low-active, moderately active, and highly activen NHANES 2003–2006 The whole population being highly active (≥1 h/wk of vigorous activity and at least 1,600 met·min/wk)o IHD; ischemic stroke; breast cancer and colon cancers; diabetes mellitus Tobacco smoking Current levels of Smoking Impact Ratio (SIR) (indirect indicator of accumulated smoking risk based on excess lung cancer mortality) [18] p Lung cancer mortality from adjusted vital registration in 2004 No smoking IHD; stroke; selected other cardiovascular diseases; diabetes mellitus; lung, esophagus, mouth and pharynx, stomach, liver, pancreas, cervix, bladder, kidney and other urinary cancers; leukemia; chronic obstructive pulmonary disease (COPD); other respiratory diseasesq tuberculosis; colorectal cancer and hypertensive disease r, burns and fire injuries, effects of smoking during pregnancy on maternal and perinatal conditions a Outcomes in italics are those for which the effects were not quantified in the main analysis due to weaker evidence on causality (e.g. tobacco smoking and colorectal cancer or high blood glucose and cancers) or because there were very few deaths from the disease (e.g. high BMI and gallbladder cancer). b We evaluated sensitivity to the choice of exposure metric by using total cholesterol instead of LDL-cholesterol (Table S1). c Two alternative TMREDs for LDL cholesterol with means of 1.6 mmol/l and 2.3 mmol/l were examined in sensitivity analysis (Table S1). d This category includes rheumatic heart disease, acute and subacute endocarditis, cardiomyopathy, other inflammatory cardiac diseases, valvular disorders, aortic aneurysm, pulmonary embolism, conduction disorders, peripheral vascular disorders, and other ill-defined cardiovascular diseases. e We did not include some of the cancers that were found to have significant association with BMI in a recent meta-analysis [17] either because there were very few deaths in the US (adenocarcinoma of esophagus and gallbladder cancer) or because there was not strong evidence on a causal effect from other studies (leukemia and multiple myeloma). We included non-Hodgkin lymphoma in a sensitivity analysis (Table S1). f The NHANES rounds in 2003–2006 include a 2-d dietary intake survey and could be used to estimate dietary trans fatty acids. However, a reliable source for the trans fat content of each food item was not available to us. We have used the intake estimates in the Continuing Survey of Food Intakes by Individuals (CSFII) 1989–1991 [68] in our analysis. g Omega-3 intake categories in the analysis were: 0 to 40 g (females) and >60 g (males). Binge drinking was defined as having at least one occasion of five or more drinks in the last month. k An alternative TMRED for alcohol use as regular drinking of small amounts of alcohol is considered in sensitivity analysis (Table S1). l This category includes ICD-9 codes 210–239. m This category includes ICD-9 codes 291, 303, and 305.0. n Categories of physical activity were defined as below using responses to questions regarding physical activity during the past 30 d: inactive, no moderate or vigorous physical activity; low-active, 40 g (females) and >60 g (males). Binge drinking was defined as having at least one occasion of five or more drinks in the last month. For IHD, the categories refer to non-binge drinkers. b For these risk factor–disease pairs, RRs in the source were reported for all ages combined. We used median age at event and the age pattern of excess risk from smoking and the same disease to estimate RRs for each age category. c This category includes ICD-9 codes 210–239. d These odds ratios were used to estimate PAF as described in the Methods section. e Used to estimated PAF for having drunk alcohol in the last 6 h before injury. 10.1371/journal.pmed.1000058.t005 Table 5 Sources and magnitudes of relative risks for the effects of physical inactivity on disease-specific mortality. Disease Outcome Source of RR Age Group Highly Active Recommended Level Active Insufficiently Active Inactive IHD Meta-analysis of 20 prospective cohort studies [87] a 30–69 1.00 1.15 1.66 1.97 70–79 1.00 1.15 1.51 1.73 80+ 1.00 1.15 1.38 1.50 Ischemic stroke Meta-analysis of 8 prospective cohort studies [87] a 30–69 1.00 1.12 1.23 1.72 70–79 1.00 1.12 1.21 1.55 80+ 1.00 1.12 1.18 1.39 Breast cancer Meta-analysis of 12 prospective cohort and 31 case-control studies [87] a 30–44 1.00 1.25 1.41 1.56 45–69 1.00 1.25 1.41 1.67 70–79 1.00 1.25 1.36 1.56 80+ 1.00 1.25 1.32 1.45 Colon cancer Meta-analysis of 11 prospective cohort and 19 case-control studies [87] a 30–69 1.00 1.07 1.27 1.80 70–79 1.00 1.07 1.21 1.59 80+ 1.00 1.07 1.16 1.39 Diabetes Meta-analysis of 13 prospective cohort and 9 case-control studies [87] a 30–69 1.00 1.21 1.50 1.76 70–79 1.00 1.21 1.43 1.60 80+ 1.00 1.21 1.34 1.45 Categories of physical activity were defined as below using responses to questions regarding physical activity during the past 30 d: inactive, no moderate or vigorous physical activity; low-active, <2.5 h/wk of moderate activity or <600 met·min/wk; moderately active: either ≥2.5 h/wk of moderate activity or ≥1 h of vigorous activity and ≥600 met·min/wk; highly active: ≥1 h/wk of vigorous activity and ≥1,600 met·min/wk. a The meta-analysis of RRs for physical inactivity used three categories: inactive, insufficiently active, and recommended-level active. For this analysis, we re-scaled the RRs to set the highly active group as the reference category. The ratio of excess risk from recommended-level active to high-active was from Manson et al. for IHD [69], Hu et al. for ischemic stroke [70], Patel et al. 2003 for breast cancer [71], and Chao et al. for colon cancer [72]. 10.1371/journal.pmed.1000058.t006 Table 6 Sources and magnitudes of relative risks for the effects of tobacco smoking on disease-specific mortality. Disease Outcome Source of RR Age Group Sex RR IHD American Cancer Society Cancer Preventions Study, Phase II (ACS CPS-II) [88] a 30–44 M 5.51 F 2.26 45–59 M 3.04 F 3.78 60–69 M 1.88 F 2.53 70–79 M 1.44 F 1.68 80+ M 1.05 F 1.38 Stroke ACS CPS-II [88] a 30–44 M 3.12 F 4.61 45–59 M 3.12 F 4.61 60–69 M 1.88 F 2.81 70–79 M 1.39 F 1.95 80+ M 1.05 F 1.00 Hypertensive disease (sensitivity analysis) b ACS CPS-II [88] a 30–44 M 5.93 F 2.38 45–59 M 3.23 F 4.05 60–69 M 1.96 F 2.67 70–79 M 1.48 F 1.74 80+ M 1.06 F 1.42 Selected other cardiovascular diseases b ACS CPS-II [88] a 30–44 M 6.91 F 2.65 45–59 M 3.68 F 4.65 60–69 M 2.15 F 3.00 70–79 M 1.58 F 1.89 80+ M 1.07 F 1.50 Diabetes mellitus Meta-analysis of 25 prospective cohort studies with 1.2 million participants [89] a — — 1.44 Lung cancer ACS CPS-II [90] a — M 21.3 F 12.5 Mouth, pharynx, and esophagus cancer ACS CPS-II [90] a — M 8.1 F 6.0 Stomach cancer ACS CPS-II [90] a — M 2.16 F 1.49 Liver cancer ACS CPS-II [90] a — M 2.33 F 1.50 Pancreas cancer ACS CPS-II [90] a — — 2.20 Cervix uteri cancer ACS CPS-II [90] a — F 1.50 Bladder cancer ACS CPS-II [90] a — M 3.00 F 2.40 Leukemia ACS CPS-II [90] a — M 1.89 F 1.23 Colorectal cancer (sensitivity analysis) ACS CPS-II [90], [91] a — M 1.32 F 1.41 Kidney and other urinary cancer ACS CPS-II [90] a — M 2.5 F 1.5 Chronic obstructive pulmonary disease ACS CPS-II [92] a — M 10.8 F 12.3 Other respiratory diseases c ACS CPS-II [92] a — M 1.90 F 2.20 Tuberculosis Meta-analysis of cohort, case-control, and cross-sectional studies [93] — — 1.62 a We used ACS CPS-II as the source of RRs because the Smoking Impact Ratio (SIR), which was used as the exposure metric for tobacco smoking in the main analysis, is calculated using ACS CPS-II cohort and because the study provided separate RRs for different cancers and cardiovascular diseases by age. The CPS-II RRs were also adjusted for multiple potential confounders. b For these disease outcomes, RRs in the source were reported for all ages combined. We used median age at event and the age pattern of excess risk from IHD to estimate RRs for each age category. c This category includes lower respiratory tract infections and asthma. 10.1371/journal.pmed.1000058.t007 Table 7 Sources and magnitudes of relative risks for the effects of metabolic risk factors on disease-specific mortality. Risk Factor Disease Outcome Source of RR Units Age Group Sex RR High blood glucose IHD Meta-analysis of 19 prospective cohort studies with 237,000 participants [7] a Per mmol/l increase 30–59 — 1.42 60–69 — 1.20 70+ — 1.20 Stroke Meta-analysis of 19 prospective cohort studies with 237,000 participants [7] a Per mmol/l increase 30–59 — 1.36 60–69 — 1.28 70+ — 1.08 Renal failure Randomized trial of 3,900 participants [94] Per mmol/l increase — 1.26 High LDL cholesterol IHD Meta-analysis of ten prospective cohort studies [12] Per mmol/l increase 30–44 — 2.94 45–59 — 2.10 60–69 — 1.59 70–79 — 1.27 80+ — 1.01 Ischemic stroke b Meta-analysis of nine prospective cohort studies [12] Per mmol/l increase 30–44 — 1.30 45–59 — 1.30 60–69 — 1.18 70–79 — 1.00c 80+ — 1.00c High total cholesterol (sensitivity analysis) IHD PSC meta-analysis of 61 prospective cohort studies with 900,000 European and North American participants [95] Per mmol/l increase 30–44 — 2.11 45–59 — 1.81 60–69 — 1.39 70–79 — 1.22 80+ — 1.18 Ischemic stroke PSC [95] Per mmol/l increase 30–44 — 1.51 45–59 — 1.37 60–69 — 1.12 70–79 — 1.00c 80+ — 1.00c High blood pressure IHD PSC [11] Per 20 mmHg increase 30–44 — 2.04 45–59 — 2.01 60–69 — 1.85 70–79 — 1.67 80+ — 1.49 Stroke PSC [11] Per 20 mmHg increase 30–44 — 2.55 45–59 — 2.74 60–69 — 2.33 70–79 — 2.00 80+ — 1.49 Hypertensive diseaseb PSC [11] Per 20 mmHg increase 30–44 — 4.78 45–59 — 5.02 60–69 — 4.55 70–79 — 4.10 80+ — 3.50 Other cardiovascular diseasesd PSC [11] Per 20 mmHg increase 30–44 — 2.52 45–59 — 2.11 60–69 — 1.89 70–79 — 1.56 80+ — 1.43 Overweight–obesity (high BMI) IHD APCSC meta-analysis of 33 prospective cohorts with 310,000 participants [65] e,f Per kg/m2 increase 30–44 — 1.14 45–59 — 1.09 60–69 — 1.08 70–79 — 1.05 80+ — 1.02 Ischemic stroke APCSC [65] Per kg/m2 increase 30–44 — 1.14 45–59 — 1.10 60–69 — 1.08 70–79 — 1.05 80+ — 1.03 Hypertensive disease APCSC [65] Per kg/m2 increase 30–44 — 1.22 45–59 — 1.18 60–69 — 1.14 70–79 — 1.11 80+ — 1.08 Postmenopausal breast cancer Meta-analysis of 31 prospective cohort studies [17] Per kg/m2 increase 45+ F 1.02 Colon cancer Meta-analysis of 22 prospective cohort studies in males and 19 in females [17] Per kg/m2 increase — M 1.04 F 1.02 Corpus uteri cancer Meta-analysis of 19 prospective cohort studies [17] Per kg/m2 increase — F 1.10 Kidney cancer Meta-analysis of 11 prospective cohort studies in males and 12 in females [17] Per kg/m2 increase — 1.05 Pancreatic cancer Meta-analysis of 12 prospective cohort studies in males and 11 in females [17] Per kg/m2 increase — M 1.01 F 1.02 Non-Hodgkin lymphoma (sensitivity analysis) Meta-analysis of six prospective cohort studies in males and seven in females [17] Per kg/m2 increase — — 1.01 Diabetes mellitus APCSC meta-analysis prospective cohort studies with 150,000 participants [96] Per kg/m2 increase 30–59 — 1.20 60–69 — 1.16 70+ — 1.11 a See Danaei et al. [61] for sensitivity to using RRs from systematic reviews of other epidemiological studies. b For these risk factor–disease pairs, RRs in the source were reported for all ages combined. We used median age at event and the age pattern of excess risk from another risk factor and the same disease (e.g., age pattern of total serum cholesterol and ischemic stroke was applied to LDL and ischemic stroke) or from the same risk factor and another disease (e.g., age pattern of excess risk for SBP and all cardiovascular diseases was applied to SBP and hypertensive disease) to estimate RRs for each age category. c We used a null association in those 70-y-old and older because RRs in two large meta-analyses of prospective studies [95], [97] were not statistically significant from null, and did not show consistent benefits for lower total cholesterol in these ages. There is some evidence from clinical trials that statins reduce the risk of stroke in older ages [98]. However, statins may reduce stroke mortality through other, non-cholesterol mechanisms such as stabilization of atherosclerotic plaques [99]. In the sensitivity analysis for high LDL cholesterol and ischemic stroke, we used an RR of 1.12 in these age groups. d This category includes rheumatic heart disease, acute and subacute endocarditis, cardiomyopathy, other inflammatory cardiac diseases, valvular disorders, aortic aneurysm, pulmonary embolism, conduction disorders, peripheral vascular disorders, and other ill-defined cardiovascular diseases. e We used meta-analyses of studies with measured weight and height because using self-reported weight and height can lead to bias in estimated RRs. The correlation between self-reported and measured weight, as found in selected studies [100], [101], does not remove the possibility of bias because even with perfect correlation, the absolute bias in self-reported weight and height may be a function of its true value. f The RRs reported for Asian and Australia–New Zealand populations were not significantly different in this meta-analysis providing empirical evidence on absence of significant effect modification in the multiplicative scale by ethnicity. A meta-analysis of studies in Europe and North America included studies [102] with self-reported height and weight and was thus not used in this analysis. The RRs reported in that meta-analysis ranged from 1.02 to 1.26 and the average RR weighted by number of cases was 1.07 per kg/m2 which is almost equal to the RR for 60- to 69-y-olds in this analysis. APCSC, Asia-Pacific Cohorts Studies Collaboration; PSC, Prospective Studies Collaboration. The studies used for etiological effect sizes included both randomized intervention studies of exposure reduction and observational studies (primarily prospective cohort studies) that estimated the effects of baseline exposure. The majority of observational studies used for effect sizes had adjusted for important potential confounding factors. Each RR used in our analysis represents the best evidence for the proportional effect of risk factor exposure on disease-specific mortality in the population based on the current causes and determinants of the population distribution of exposure (see also Discussion). We used RRs for blood pressure, LDL cholesterol, and FPG that were adjusted for regression dilution bias using studies that had repeated exposure measurement [7],[11], [12]; for blood pressure and LDL cholesterol, the adjusted magnitude is supported by effect sizes from randomized studies [13],[14]. Evidence from a large prospective study with multiple measurements of weight and height showed that regression dilution bias did not affect the RRs for BMI, possibly because there is less variability [15]. RRs for dietary salt and PUFA-SFA replacement were from intervention studies, and hence unlikely to be affected by regression dilution bias. RRs for dietary trans fatty acids were primarily from studies that had used cumulative averaging of repeated measurements [16] that reduces but may not fully correct for regression dilution bias. RRs for physical inactivity, alcohol use, smoking, and dietary omega-3 fatty acids and fruits and vegetables were not corrected for regression dilution bias due to insufficient current information from epidemiological studies on exposure measurement error and variability, which is especially important when error and variability of self-reported exposure may themselves differ across studies. For each risk factor–disease pair, we used the same RR for men and women except where empirical evidence indicated that the RR differed by sex: colon and pancreas cancers caused by high BMI [17], and all disease outcomes caused by alcohol use and tobacco smoking, for which there are sex differences in factors such as smoking duration and intensity [18] and type of alcohol consumed [19]. The RRs for some risk factor–disease associations vary by age, especially for cardiovascular diseases. We used consistent age-varying distributions of RRs across risk factors and diseases (Tables 2– 7). The current evidence suggests that when measured comparably the proportional effects of the risk factors considered in this analysis are similar across populations, e.g., Western and Asian populations [7],[20],[21]. The exception to this observation is the effects of alcohol use on ischemic heart disease (IHD) where the pattern of drinking (regular versus binge) determines the RR. We used both the average quantity of alcohol consumed as well as the drinking pattern in our analysis of exposure and RRs for alcohol use and IHD. The effects of alcohol on injuries and violence may also be modified by social, policy, and transportation factors. Therefore, we did not pool epidemiological studies on the injury effects of alcohol from different countries, but used data sources that appropriately measure effects in the US (Table 4). Disease-specific deaths The number of disease-specific deaths, by age and sex, was obtained from the NCHS, which maintains records for all deaths in the US. Although the US has automated (computerized) assignment of an International Classification of Diseases (ICD) code for the underlying cause of death, the validity and comparability of cause of death statistics may be affected at the time of medical certification, especially for cardiovascular causes and diabetes [22]–[24]. We adjusted for incomparability in cause of death assignment using previously described methods [22],[23]. This adjustment required information on multiple contributing causes of death and county of residence. We obtained county identifiers for all deaths in 2005 through a special request to the NCHS. Several risk factors have different effects on ischemic and hemorrhagic stroke (Table 1). Slightly more than 50% of stroke deaths in 2005 were assigned to unspecified subtype (ICD-10 code I-64). We redistributed these deaths to ischemic and hemorrhagic stroke using proportions from large epidemiological studies with high-quality diagnosis and cause-of-death assignment [25], stratified by age using a meta-analysis of stroke registries in Western populations [26]. Estimating Mortality Attributable to Risk Factors For each risk factor and for each disease causally associated with its exposure, we computed the proportional reduction in disease-specific deaths that would occur if risk factor exposure had been reduced to an alternative level. This is known as the population-attributable fraction (PAF) and measures the total effects of a risk factor (direct as well as mediated through other factors). For risks measured continuously (blood pressure, BMI, LDL cholesterol, FPG, dietary fruits and vegetables, and trans and polyunsaturated fatty acids), we computed PAFs using the following relationship. (1) Where x = exposure level; P(x) = actual distribution of exposure in the population; P′(x) = alternative distribution of exposure in the population; RR(x) = relative risk of mortality at exposure level x; and m = maximum exposure level. For risks measured in categories of exposure (smoking, physical inactivity, alcohol use, and dietary omega-3 fatty acids), we used the discrete version of the same estimator for PAF. We used a different method of estimating the PAFs for effects of alcohol use on injuries. A number of emergency room studies have collected information on alcohol consumption in the 6 h prior to the injury among injury patients. Injuries that occur among patients who had consumed alcohol prior to their injury were classified as “alcohol-related” injuries. Because some of these injuries would have occurred in the absence of alcohol, not all are caused by alcohol use; in other words, the proportion of alcohol-attributable injuries is lower than that of alcohol-related injuries. Highway studies have quantified the increased risk of road traffic deaths among drivers who have consumed alcohol according to the drivers' blood alcohol concentration, often reported as odds ratios (ORs). Ideally, ORs would be used in conjunction with data on population prevalence of intoxication to calculate PAF. Because intoxication data were not available, we used a slightly modified equation to calculate the PAF using ORs from highway studies and data on alcohol-related injuries: (2) The proportion of alcohol-related injuries was obtained from Fatality Analysis Reporting System (FARS) for road traffic injuries and from a meta-analysis of emergency room studies for other types of intentional and unintentional injuries [27], [28]. FARS is a census of fatal crashes maintained by the National Highway Traffic Safety Administration and includes information on the blood alcohol concentration (BAC) level of drivers involved in fatal crashes, regardless of whether the decedent was the driver or not. Beginning in 2001, National Center for Statistics and Analysis uses a multiple imputation method to impute ten values for each missing BAC value. Additional information on FARS is available at http://www-fars.nhtsa.dot.gov/Main/index.aspx. The sources for ORs are provided in Table 4. We calculated the number of deaths from each causally related disease outcome attributable to a risk factor by multiplying its PAF by total deaths from that disease. Disease-specific deaths attributable to each risk factor were summed to obtain the total (all-cause) attributable deaths. Deaths from different diseases attributable to a single risk factor are additive because in mortality statistics based on the ICD, each death is categorically assigned to a single underlying cause (disease) with no overlap between disease-specific deaths. However, the deaths attributable to individual risk factors often overlap and should not be summed (see Discussion). To measure the mortality effects of all non-optimal levels of exposure consistently and comparably across risk factors, we used an optimal exposure distribution, referred to as the theoretical-minimum-risk exposure distribution (TMRED), as the alternative exposure distribution (Table 1). The TMREDs were zero for risk factors for which zero exposure led to minimum risk (e.g., no tobacco smoking). For BMI, blood pressure, blood glucose, and LDL cholesterol, zero exposure is physiologically impossible. For these risks we used TMREDs based on the levels corresponding to the lowest mortality rate in epidemiological studies or the levels observed in low-exposure populations (Table 1). Alcohol use may be beneficial or harmful depending on the specific disease outcome and patterns of alcohol consumption [29], [30]. We used a TMRED of zero for alcohol in our primary analysis, and regular drinking of small amounts as the TMRED in a sensitivity analysis. The TMREDs for factors with protective effects (physical activity and dietary PUFA-SFA replacement, omega-3 fatty acids, and fruits and vegetables) were selected as the intake and activity levels to which beneficial effects may plausibly continue based on the evidence from current studies. For example, intake of omega-3 fatty acids seems to reduce IHD mortality at intakes up to 250 mg/d, but has relatively little additional mortality benefits at higher intakes [31]. In setting TMREDs for protective factors, we also took into account the levels observed in populations that have high intake, e.g., for fruits and vegetables. We conducted all analyses separately by sex and age group (30–44, 45–59, 60–69, 70–79, and ≥80 y). We restricted analyses to ≥30 y because there are limited data on the mortality effects of these risk factors at younger ages and because there are few deaths from diseases affected by these risks in younger ages (about 10,000 deaths from the relevant non-injury causes in Americans <30 y versus 1,745,000 in those ≥30 y). The exception was the effect of alcohol use on injuries for which we also included 0- to 29-y-olds because there are substantial injury deaths at these ages. Therefore, we can assess both the role of alcohol use as a cause of injuries in young drinkers and the effect of alcohol use by any drinker (e.g., an intoxicated driver) on injury in young nondrinkers. Uncertainty and Sensitivity Analyses We estimated the uncertainty of the number of deaths attributable to each risk factor as caused by sampling variability. To compute sampling uncertainty, we used a simulation approach to combine the uncertainties of exposure distributions and RRs in each age–sex group. In the simulation method, we drew repeatedly from the distributions of exposure mean and SD (for continuous risks) or prevalence in each exposure category (for categorical risks). The uncertainty of these parameters was characterized using normal, Chi-square, or binomial distributions. RRs for each disease were drawn from a log-normal distribution independently from exposure. Each set of exposure and disease-specific RR draws was used to calculate the PAFs for all diseases associated with the risk factor, separately by age and sex. We used 500 draws for each risk factor, and report 95% confidence intervals (CIs) based on the resulting distributions of 500 estimated attributable deaths. Further simulation details and computer code are available from the authors by request. In addition to sampling uncertainty, we examined the sensitivity of our results to important methodological factors and data sources. The methodological factors and data sources in the sensitivity analyses included the choice of exposure metrics, the shape of the exposure distribution, the TMREDs, disease outcomes causally associated with risk factors, and etiological effect sizes (Table S1). We used RRs adjusted for major potential confounders to estimate the causal components of risk factor–disease associations. However, if there is also a correlation between exposure and disease-specific mortality, due to correlations of exposure with other risks or other unobserved factors, the above equations may result in under- (when there is positive correlation) or over-estimation (negative correlation) of the true PAF when used with adjusted RRs [32]–[36]. To assess the effect of correlation, we also calculated PAFs that incorporated correlations between risk factors or between risk factors and underlying disease-specific mortality in multiple sensitivity analyses. Ideally the analyses of risk factor correlations would have used the complete multivariate distribution of exposure to all risk factors and disease outcomes. However, the sources in this analysis did not provide data on the joint exposure distributions of all risk factors together. Therefore, our analyses of risk factor correlation using current data sources were limited to risk factor pairs. Analyses were conducted using Stata version 10 (Stata Corp, College Station, Texas) and SAS version 9.1 (SAS Institute, Cary, NC). Results In the year 2005, 2,448,017 US residents died; 49% of these deaths were among men. Ninety-six percent of all deaths in the US were in people ≥30 y of age. After adjustment for comparability of cause-of-death assignment [22],[23], the four most common causes of death were IHD (434,000 deaths), lung cancer (163,000 deaths), stroke (150,000 deaths), and chronic obstructive pulmonary diseases (124,000 deaths). Total Mortality Effect of Risk Factors Tobacco smoking was responsible for an estimated 467,000 (95% CI 436,000–500,000) deaths and high blood pressure for 395,000 (372,000–414,000) deaths, each accounting for about one in five or six deaths in US adults in 2005 (Figure 1A, Table 8). Overweight–obesity, physical inactivity, and high blood glucose each caused 190,000–216,000 deaths (8%–9% of all deaths in adults). The mortality effects of individual dietary risk factors ranged from 15,000 deaths for low dietary PUFA (<1% of all deaths) to 82,000–102,000 deaths for low dietary omega-3 fatty acids, high dietary trans fatty acids, and high dietary salt. Alcohol use caused 90,000 deaths from road traffic and other injuries, violence, chronic liver disease, cancers, alcohol use disorders, hemorrhagic stroke, arrhythmias and hypertensive disease, but also averted a balance of 26,000 deaths from IHD, ischemic stroke, and diabetes, due to benefits among those who drank alcohol moderately and regularly. 10.1371/journal.pmed.1000058.g001 Figure 1 Deaths attributable to total effects of individual risk factors, by disease. Data are shown for both sexes combined (upper graph); men (middle graph); and women (lower graph). See Table 8 for 95% CIs. Notes: We used RRs for blood pressure, LDL cholesterol, and FPG that were adjusted for regression dilution bias using studies that had repeated exposure measurement [7],[11],[12]; for blood pressure and LDL cholesterol, the adjusted magnitude is supported by effect sizes from randomized studies [13],[14]. Evidence from a large prospective study using multiple measurements of weight and height showed that regression dilution bias did not affect the RRs for BMI, possibly because there is less variability [15]. RRs for dietary salt and PUFA were from intervention studies, and hence unlikely to be affected by regression dilution bias. RRs for dietary trans fatty acids were primarily from studies that had used cumulative averaging of repeated measurements [16] that reduces but may not fully correct for regression dilution bias. RRs for physical inactivity, alcohol use, smoking, and dietary omega-3 fatty acids and fruits and vegetables were not corrected for regression dilution bias due to insufficient current information from epidemiological studies on exposure measurement error and variability, which is especially important when error and variability of self-reported exposure may themselves differ across studies. Regression dilution bias often, although not always, underestimates RRs in multivariate analysis [48]. aThe figures show deaths attributable to the total effects of each individual risk. There is overlap between the effects of risk factors because of multicausality and because the effects of some risk factors are partly mediated through other risks. Therefore, the number of deaths attributable to individual risks cannot be added. bThe effect of high dietary salt on cardiovascular diseases was estimated through its measured effects on systolic blood pressure. cThe protective effects of alcohol use on cardiovascular diseases are its net effects. Regular moderate alcohol use is protective for IHD, ischemic stroke, and diabetes, but any use is hazardous for hypertensive disease, hemorrhagic stroke, cardiac arrhythmias, and other cardiovascular diseases. NCD, noncommunicable diseases. 10.1371/journal.pmed.1000058.t008 Table 8 Deaths from all causes (thousands of deaths) attributable to risk factors and the 95% confidence intervals of their sampling uncertainty. Risk factor Male Female Both Sexes Tobacco smoking 248 (226–269) 219 (196–244) 467 (436–500) High blood pressure 164 (153–175) 231 (213–249) 395 (372–414) Overweight–obesity (high BMI) 114 (95–128) 102 (80–119) 216 (188–237) Physical inactivity 88 (72–105) 103 (80–128) 191 (164–222) High blood glucose 102 (80–122) 89 (69–108) 190 (163–217) High LDL cholesterol 60 (42–70) 53 (44–59) 113 (94–124) High dietary salt (sodium) 49 (46–51) 54 (50–57) 102 (97–107) Low dietary omega-3 fatty acids (seafood) 45 (37–52) 39 (31–47) 84 (72–96) High dietary trans fatty acids 46 (33–58) 35 (23–46) 82 (63–97) Alcohol usea 45 (32–49) 20 (17–22) 64 (51–69) Low intake of fruits and vegetables 33 (23–45) 24 (15–36) 58 (44–74) Low dietary polyunsaturated fatty acids (PUFA) (in replacement of SFA) 9 (6–12) 6 (3–9) 15 (11–20) a Excludes uncertainty in intentional and unintentional injury outcomes because the attributable deaths used data sources that did not report sampling uncertainty. Mortality Effects of Risk Factors by Disease Most deaths attributable to these risks were from cardiovascular diseases (Figure 1). Cancers, respiratory diseases, diabetes, and injuries nonetheless accounted for at least 23% of all deaths caused by smoking, alcohol use, high blood glucose, physical inactivity, low intake of fruits and vegetables, and overweight–obesity. The single largest risk factor for cardiovascular mortality in the US was high blood pressure, responsible for an estimated 395,000 (95% CI 372,000–414,000) cardiovascular deaths (45% of all cardiovascular deaths), followed by overweight–obesity, physical inactivity, high LDL cholesterol, smoking, high dietary salt, high dietary trans fatty acids, and low dietary omega-3 fatty acids. Smoking had the largest effect on cancer mortality compared with any other risk factor, causing an estimated 190,000 (184,000–194,000) or 33% of all cancer deaths. Mortality Effects of Risk Factors by Sex and Age High blood pressure was the leading cause of death in women (231,000 deaths [95% CI 213,000–249,000], 19% of all female deaths), whereas smoking remains the leading cause of death in men (248,000 deaths [226,000–269,000], 21% of all male deaths). The leading causes of death in men and women were different because women have higher blood pressure and men higher cumulative (i.e., current and former) smoking. Overweight–obesity, physical inactivity, and high blood glucose were the third to fifth causes of death for both sexes (Figure 1B and 1C). High dietary salt was responsible for slightly more deaths than high LDL cholesterol in women. The mortality effects of all individual risk factors except alcohol use were almost equally divided between men and women (i.e., at least 40% of deaths attributable to each individual risk factor were either in men or in women). Seventy percent of all deaths attributable to alcohol use occurred in men (45,000 deaths), because men consumed more alcohol and had more binge drinking. Four percent of all deaths in the US occurred in people between 30 and 45 y of age. No individual risk factor was responsible for more than 7% of deaths in this age group. However, this age group bore 34% of alcohol-caused injuries (Table 9), making injury deaths in young adults the major mortality impact of alcohol use. Eighty percent of deaths attributable to high blood pressure and 68% and 70% of those attributable to high dietary salt and physical inactivity, respectively, occurred after 70 y of age (Table 9). Conversely, 40% or more of all deaths attributable to high LDL cholesterol, overweight–obesity, high dietary trans fatty acids, low dietary PUFA and omega-3 fatty acids, low intake of fruits and vegetables, alcohol use, and smoking occurred before 70 y of age (Table 9). As a result, when the young and middle-aged (≤70 y of age) mortality effects of these risk factors were evaluated, smoking was by far the leading cause of death in both men and women ≤70 y, followed by overweight–obesity (Figure 2). 10.1371/journal.pmed.1000058.g002 Figure 2 Deaths attributable to total effects of individual risk factors, by disease in those below 70 years of age. Data are shown for both sexes combined (upper graph); men (middle graph); and women (lower graph). See Figure 1 notes. 10.1371/journal.pmed.1000058.t009 Table 9 Distribution of cause-specific and all-cause deaths attributable to risk factors by age group and by sex. Risk Factor Disease 0–29 y 30–45 y 45–69 y ≥ 70 y Males Females High blood glucose Cardiovascular diseases NA 2 (1 to 3) 31 (24 to 40) 68 (58 to 75) 55 (43 to 68) 45 (32 to 57) Diabetes mellitusa NA 3 (3 to 3) 33 (33 to 33) 64 (64 to 64) 51 (51 to 51) 49 (49 to 49) Renal failure NA 1 (0 to 6) 21 (3 to 71) 77 (26 to 96) 53 (12 to 94) 47 (6 to 88) All causes NA 2 (2 to 3) 31 (26 to 36) 67 (61 to 72) 53 (46 to 61) 47 (39 to 54) High LDL cholesterol Cardiovascular diseases NA 4 (0 to 6) 40 (30 to 47) 55 (50 to 66) 53 (44 to 59) 47 (41 to 56) High blood pressure Cardiovascular diseases NA 1 (1 to 1) 19 (18 to 20) 80 (79 to 82) 42 (39 to 44) 58 (56 to 61) Overweight–obesity (high BMI) Cardiovascular diseases NA 5 (3 to 6) 41 (33 to 48) 55 (47 to 63) 55 (47 to 65) 45 (35 to 53) Cancers NA 2 (2 to 3) 42 (38 to 47) 55 (51 to 60) 40 (36 to 46) 60 (54 to 64) Diabetes mellitus NA 5 (4 to 5) 42 (38 to 47) 54 (48 to 58) 52 (46 to 58) 48 (42 to 54) All causes NA 4 (3 to 5) 41 (36 to 46) 55 (49 to 61) 53 (47 to 60) 47 (40 to 53) High dietary trans fatty acids Cardiovascular diseases NA 5 (3 to 7) 41 (31 to 50) 54 (45 to 65) 57 (46 to 67) 43 (33 to 54) Low dietary polyunsaturated fatty acids (PUFA) (in replacement of SFA) Cardiovascular diseases NA 7 (2 to 11) 40 (23 to 56) 53 (37 to 70) 59 (43 to 75) 41 (25 to 57) Low dietary omega-3 fatty acids Cardiovascular diseases NA 4 (3, 5) 36 (30 to 41) 60 (54 to 66) 53 (47 to 60) 47 (40 to 53) High dietary salt Cardiovascular diseases NA 3 (3 to 3) 28 (27 to 30) 69 (67 to 70) 47 (45 to 50) 53 (50 to 55) Cancers NA 5 (1 to 8) 36 (21 to 52) 59 (43 to 74) 58 (40 to 73) 42 (27 to 60) All causes NA 3 (3 to 3) 29 (27 to 30) 68 (66 to 70) 48 (45 to 50) 52 (50 to 55) Low intake of fruits and vegetables Cardiovascular diseases NA 3 (1 to 5) 35 (22 to 52) 62 (44 to 75) 55 (37 to 76) 45 (24 to 63) Cancers NA 3 (2 to 5) 56 (39 to 71) 41 (25 to 58) 62 (47 to 76) 38 (24 to 53) All causes NA 3 (2 to 5) 43 (32 to 57) 54 (39 to 66) 58 (45 to 71) 42 (29 to 55) Alcohol use b Cardiovascular diseases NA 11 (4 to 34) 131 (93 to 159) −42 (−75 to −7) 105 (85 to 126) −5 (−26 to 15) Cancers NA 5 (4 to 6) 55 (49 to 61) 40 (34 to 46) 64 (58 to 69) 36 (31 to 42) Diabetes mellitus NA 5 (4 to 6) 44 (40 to 49) 51 (46 to 55) 50 (45 to 55) 50 (45 to 55) Other noncommunicable diseasesc NA 15 (14 to 16) 68 (66 to 71) 17 (15 to 19) 74 (72 to 76) 26 (24 to 28) Injuriesd 31 (31 to 31) 34 (34 to 34) 29 (29 to 29) 6 (6 to 6) 77 (77 to 77) 23 (23 to 23) All causes 18 (16 to 23) 24 (21 to 30) 34 (20 to 40) 24 (20 to 30) 70 (62 to 73) 30 (27 to 38) Physical inactivity Cardiovascular diseases NA 2 (1 to 2) 24 (19 to 30) 74 (68 to 79) 49 (40 to 60) 51 (40 to 60) Cancers NA 5 (3 to 7) 42 (35 to 50) 53 (45 to 60) 24 (18 to 29) 76 (71 to 82) Diabetes mellitus NA 3 (2 to 5) 35 (28 to 43) 61 (52 to 69) 50 (40 to 61) 50 (39 to 60) All causes NA 2 (2 to 3) 28 (23 to 33) 70 (64 to 75) 46 (38 to 54) 54 (46 to 62) Tobacco smoking Cardiovascular diseases NA 4 (0 to 7) 51 (43 to 63) 44 (34 to 54) 49 (38 to 60) 51 (40 to 62) Cancers NA 1 (0 to 2) 43 (42 to 44) 56 (55 to 57) 61 (60 to 62) 39 (38 to 40) Other respiratory diseasese NA 0 (0 to 1) 21 (19 to 22) 79 (78 to 80) 46 (44 to 48) 54 (52 to 56) Diabetes mellitus NA 1 (0 to 3) 36 (30 to 41) 63 (57 to 68) 50 (44 to 57) 50 (43 to 56) All causes NA 2 (0 to 3) 39 (36 to 42) 59 (56 to 62) 53 (49 to 57) 47 (43 to 51) Numbers show percent in each age group or in each sex and the corresponding 95% confidence intervals of sampling uncertainty. a There is no sampling uncertainty for this outcome because all the deaths due to diabetes are by definition attributable to high blood glucose. b The negative proportions for alcohol use and cardiovascular diseases in older ages and in females occur because the protective effects are larger than the hazardous effects. c This category includes liver cirrhosis, acute and chronic pancreatitis, and alcohol use disorders. d We did not estimate sampling uncertainty for injury outcomes because the attributable deaths used data sources that did not report sampling uncertainty. e This category includes lower respiratory tract infections, asthma, and tuberculosis. Mortality Effects of Risk Factor by Exposure Level There was substantial variation in how deaths attributable to these risks were distributed below or above commonly used thresholds and guidelines (Table 10): close to two-thirds of deaths attributable to high blood pressure (66%), high BMI (63%), and high blood glucose (60%) occurred in people who would be clinically classified as hypertensive, obese, or diabetic, even though these groups make up only 10%–33% of the US adult population (note that the estimated benefits in these people would be achieved if risk factor levels are reduced to their TMREDs, and not simply to the clinical threshold). In contrast, more than one-half of deaths attributable to high LDL cholesterol were among people below the conventional threshold for defining dyslipidemia (3.37 mmol/l). 10.1371/journal.pmed.1000058.t010 Table 10 Distribution of risk factor exposure and attributable deaths by ranges or categories of exposure defined using common clinical and public health thresholds and guidelines. Risk Factor Source of Definition for Categories Exposure Categories Percentage of Attributable Deaths Percentage of Population (≥30 Years Old) High blood glucose a Definition of diabetes (FPG≥7 mmol/l) and impaired FPG (FPG 5.56 to 6.99 mmol/l) by American Diabetes Association [103] FPG≥7 mmol/l 60 10 FPG 5.56–6.99 mmol/l 34 29 FPG<5.56 mmol/l 6 61 High LDL cholesterol Definition of high LDL cholesterol in low risk (4.14 mmol/l) and moderate risk (3.37 mmol/l) individuals in Adult Treatment Panel III guidelines [104] LDL≥4.14 mmol/l 5 11 LDL 3.37–4.13 mmol/l 30 22 LDL<3.37 mmol/l 65 67 High blood pressure Definition of hypertension (SBP≥140 mmHg) [105] SBP≥140 mmHg 66 15 SBP<140 mmHg 34 85 Overweight–obesity (high BMI) Definition of obesity (BMI≥30 kg/m2) and overweight (BMI 25 to 29.9 kg/m2) BMI≥30 kg/m2 63 33 BMI 25–29.9 kg/m2 29 33 BMI<25 kg/m2 8 33 High dietary salt Recommended level of dietary sodium (<100 mmol/d) by American Heart Association [106] Dietary sodium≥100 mmol/d 88 75 Dietary sodium<100 mmol/d 12 25 Physical inactivity Definition of moderately active (600 met·min/wk) is the same as the recommended level of activity by Centers for Disease Control and Prevention [107] Inactive 74 31 Low-active 19 25 Moderately active 7 23 Highly active 0 21 Tobacco smoking — Current smokers 43 25 Former smokers 57 25 Never smokers 0 50 The proportion of population and mortality effects in different exposure categories. We have not included dietary risks other than dietary salt in this table primarily because current guidelines do not recommend a specific level of intake. a Deaths assigned to diabetes mellitus in the vital statistics and deaths attributable to renal failure are included in the ≥7 mmol/l category because all individuals whose deaths are assigned to diabetes or diabetic renal failure would, by definition, have been diagnosed with diabetes disease, and hence have FPG ≥7 mmol/l. The burden of smoking was almost equally distributed among current and former smokers, because harmful effects continue among many Americans who have quit smoking. Twenty-nine percent of the chronic disease mortality effects of alcohol use occurred among heavy drinkers (i.e., men who consumed more than 60 grams of pure alcohol or 4 drinks per day and women who consumed more than 40 grams per day); this group did not have any mortality benefits from alcohol use. In contrast, in those who had light alcohol consumption (up to 40 g per day for men and 20 g per day for women), the protective effects on IHD and diabetes mortality were larger than the hazardous effects from other chronic diseases, leading to an overall reduction in mortality in this group (unpublished results). Sensitivity Analyses The results of the sensitivity analyses in Table S1 show that the estimated numbers of deaths attributable to risk factors were most sensitive to the choice of the optimal exposure distribution (the TMRED) to which current risk factor exposure distributions were compared. For example, if the TMREDs for LDL cholesterol and BMI were 2.3 (instead of 2.0) mmol/l and 23 (instead of 21) kg/m2, respectively, the number of deaths attributable to them would be 18% and 19% lower. Similarly, lowering the TMRED of physical activity to the (less ambitious) current recommended level of 600 met·min per week (equivalent to 20 min of moderate activity every day) would prevent 62,000 (32%) fewer deaths than if people pursued a higher goal of 1,600 met·min per week (including at least one hour of vigorous activity per day). The TMRED for alcohol use must balance its harmful and beneficial effects. If the entire adult US population had light alcohol consumption, a total of 12,000 cardiovascular deaths would be prevented, largely among adults aged ≥45 y. However, this level of alcohol consumption would also cause an estimated 8,000 deaths due to road traffic accidents largely among adults aged <30 y. Incorporating correlation of a risk factor with disease-specific mortality and with other risks changed the estimated number of deaths attributable to a risk factor by 3%–31%, depending on the specific risk factor and disease. The results were robust to whether exposure in the population was approximated with a normal distribution and to the inclusion of the few disease outcomes for which the evidence of causal association was weaker. Mortality effects of dietary salt were sensitive to the magnitude of its effects on SBP, because there was an almost 2-fold difference between two separate meta-analyses of salt reduction trials [37],[38]. Discussion Our analysis of the mortality effects of major dietary, lifestyle, and metabolic risk factors in the US using comparable methods showed that tobacco smoking and high blood pressure were the leading risk factors for mortality, responsible for nearly one in five and one in six deaths in US adults, respectively. The large effects of tobacco smoking were caused by long-term cumulative exposure in current smokers as well as the remaining effects in former smokers, especially in men. The large numbers of deaths attributable to high blood pressure were related to high exposure levels, particularly in women [39]. Overweight–obesity, physical inactivity, and high blood glucose each caused about one in ten deaths, and both affected women disproportionately more than men. In those younger than 70 y of age, tobacco smoking was by far the leading modifiable cause of death, and overweight–obesity caused more deaths than did high blood pressure. Other lifestyle, metabolic, and dietary risk factors for chronic diseases also caused significant adult mortality, although their individual effects were 3%–24% of those of smoking. A comparison of our results with those of other risk factors is shown in Table S2. This comparison was done only for those risk factors included in previous analyses, because these analyses had included substantially fewer metabolic and dietary risks than ours. Each RR used in our analysis represents the best evidence for the impact of risk factor exposure on disease-specific mortality in the population, based on the current causes and determinants of the population distribution of exposure. The mortality effects of a risk factor may depend on whether an expected increase in exposure is prevented or whether exposure is reduced after it has risen. It may also depend on the specific intervention used to prevent or reverse risk factor exposure. The estimated effects of blood pressure, LDL cholesterol, omega-3 fatty acids, and PUFA-SFA replacement have been generally consistent between observational studies that measure exposure at baseline and intervention studies that reduce exposure prospectively [12],[14],[31]. There is also evidence that former smokers reduce their risk to that of never-smokers over time [40]. Although mortality effects of other risks in our analysis have not been tested in appropriately designed and powered intervention studies, trials and observational studies provide similarly valid results on related nonfatal events for some risks, e.g., effects of BMI on incident diabetes [41],[42]. Possibly the most important case of current discrepancy between prospective observational cohorts and intervention studies is the mortality effect of high blood glucose. Prospective studies have shown relatively large associations between usual FPG and mortality [7],[43], but randomized intervention studies have shown null effects, and declines as well as increases in mortality when glucose was lowered intensively relative to those who had conventional management [44],[45]. This discrepancy may reflect the actual intervention mechanism (lifestyle versus pharmacologic treatment) or the differential effects of avoiding an increase in blood glucose versus subsequent lowering. Alternatively, blood glucose may be a partial or confounded marker of other underlying metabolic dysfunction, so that interventions targeting only glucose may be unsuccessful at ameliorating all of the observed risk. Further research is needed on the causal effects of blood glucose on mortality risk and on the role of specific lifestyle and pharmacologic interventions. Finally, there is also a need to systematically examine whether salt reduction trials with sufficiently long follow-up duration can capture the full blood pressure–lowering benefits of having maintained low salt intake throughout the life course [37]. Our results estimate the total effects of each individual risk factor. Disease-specific deaths are caused by multiple factors acting simultaneously, and hence could be prevented by intervening on single or multiple risk factors, e.g., some IHD deaths may be prevented by reducing SBP, LDL cholesterol, smoking, or combinations of these risks [46]. Further, part of the effect of one risk factor may be mediated through another, e.g., dietary factors and physical inactivity may affect IHD with part of their effect occurring by changes in BMI, blood pressure, glucose, and LDL cholesterol. Deaths attributable to multiple causally related or overlapping risk factors should not be combined by simple addition. Future analyses, both in epidemiological cohorts and at the population level, should examine the individual and combined effects of multiple exposures that affect the same diseases, including how much of the effects of lifestyle and dietary risks are mediated through metabolic factors. Finally, the effects of dietary macronutrients may vary depending on the macronutrient replacement (e.g., for PUFA; see Table 2 for details). Therefore, the interpretation of results should take such replacement issues into account. There are a number of innovations and strengths in our analysis. This is, to our knowledge, the first population-level analysis of the mortality effects of risk factors to include a relatively large number of dietary and metabolic risk factors, and to use consistent and comparable methods. This comparative quantification helped identify the important roles of diet and physical inactivity, other lifestyle factors, and metabolic risks as preventable causes of death in the US population. Effect sizes were derived from large meta-analyses of either randomized trials or observational studies that had adjusted for important confounders. RRs from meta-analyses tend to reduce random error relative to individual studies; they may also reduce bias if the directions of bias are not the same in individual studies. We used exposure distributions and effect sizes that accounted for measurement error associated with one-off measurements to the extent possible. Our study presented deaths attributable to risk factors by age and sex, and by exposure level. The latter helped identify whether those whose exposure remains uncontrolled with current diagnosis and treatment programs versus those who are currently below clinical thresholds should be targeted for greatest effects on mortality. Finally, we quantified the sampling uncertainty of our estimates; we also analyzed how specific methods and data sources affected our quantitative results in extensive sensitivity analyses. This demonstrated that although the specific numerical results are uncertain, our overall findings on the relative mortality effects of these dietary, lifestyle, and metabolic risk factors are robust. Population level analyses of mortality effects of risk factors such as ours are also affected by some limitations and uncertainties. First, several potentially important risk factors were considered, but could not be included because sufficient or unbiased data on their national exposure distributions and/or effects on disease-specific mortality were not available, or because the evidence on causal effects was less convincing. Second, for many risks the choice of disease outcomes and effect sizes were derived from observational studies. In such cases, whether the collectivity of evidence established a causal association had to be assessed using multiple criteria, such as those proposed by Hill [47]. In such cases, the possibility of residual confounding cannot be excluded. Our ability to account for measurement error in exposure and to correct for regression dilution bias was limited to those risk factors for which relevant data were available from epidemiological studies; for other risks, our results should be considered as conservative estimates of the effects because regression dilution bias often, although not always, leads to lower RRs in multivariate analysis [48]. RRs from meta-analyses may not be completely generalizable to population-level effects; nevertheless, such estimation is indispensable to inform policy making. More importantly, in many cases there is empirical evidence to support the proposition that proportional effects are similar across populations, e.g., Western and Asian populations [7],[20],[21]. The hazardous effects of some risk factors accumulate gradually after exposure begins and decline slowly after exposure is reduced. This is illustrated by results from trials that have lowered blood pressure and cholesterol, and from studies in which some people quit smoking [13],[40]. Time-dependence of risk may further vary by disease, e.g., the effects of tobacco smoking on lung cancer versus cardiovascular diseases [49]. Because smoking prevalence has declined in the US, the use of the smoking impact ratio (SIR) as the metric of cumulative exposure [18] may have overestimated the cardiovascular deaths attributable to smoking. However, the difference between the estimated number of deaths using this method and using the measured prevalence of current and former smoking was <14% (Table S1). The use of RRs from cohort studies that started a few decades ago may overestimate the effects of BMI on diseases such as IHD if “mediators” such as SBP and cholesterol have been lowered over time in those with high BMI [50]–[52], but underestimate the effects for other diseases such as diabetes because the current US population gained weight at younger ages than the cohort participants. Future research should attempt to investigate time-dependent effects of blood glucose, BMI, physical activity, and dietary factors, because their exposures have changed in the US over time. The results of our analysis of dietary, lifestyle, and metabolic risk factors show that targeting a handful of risk factors has large potential to reduce mortality in the US, substantially more than the currently estimated 18,000 deaths averted annually by providing universal health insurance [53]. Global analyses also found that a relatively modest number of risk factors were responsible for a substantial proportion of mortality and disease burden in many world regions. At the same time the mix of leading risks varied across regions, as did risk factor levels in relation to economic development and urbanization [46],[54]. Therefore there is a need for national, and even subnational, analysis of the health consequences of these risks in countries at different levels of development using local exposure data [55]. The risk factors in this analysis can be influenced through both individual-level and population-wide interventions. In particular, effective interventions are available for tobacco smoking and high blood pressure, the leading two causes of mortality in the US [56]–[58]. Combinations of food industry regulation, pricing, and better information can also be effective in reducing exposure to dietary salt and trans fatty acids, especially in packaged foods and prepared meals. Despite the availability of interventions, blood pressure and tobacco smoking decline in the US have stagnated or even reversed [39],[59], and there has been a steady increase in overweight–obesity [60]. Research, implementation, monitoring, and evaluation related to interventions that reduce these modifiable risk factors should be a high priority. Supporting Information Table S1 Sensitivity of results to methodological choices and data sources. (0.08 MB DOC) Click here for additional data file. Table S2 Comparison of estimated number of deaths attributable to risk factors with those from previous studies. (0.07 MB DOC) Click here for additional data file.
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            The inhibition of mitochondrial cytochrome oxidase by the gases carbon monoxide, nitric oxide, hydrogen cyanide and hydrogen sulfide: chemical mechanism and physiological significance.

            The four gases, nitric oxide (NO), carbon monoxide (CO), hydrogen sulfide (H(2)S) and hydrogen cyanide (HCN) all readily inhibit oxygen consumption by mitochondrial cytochrome oxidase. This inhibition is responsible for much of their toxicity when they are applied externally to the body. However, recently these gases have all been implicated, to greater or lesser extents, in normal cellular signalling events. In this review we analyse the chemistry of this inhibition, comparing and contrasting mechanism and discussing physiological consequences. The inhibition by NO and CO is dependent on oxygen concentration, but that of HCN and H(2)S is not. NO and H(2)S are readily metabolised by oxidative processes within cytochrome oxidase. In these cases the enzyme may act as a physiological detoxifier of these gases. CO oxidation is much slower and unlikely to be as physiologically important. The evidence for normal physiological levels of these gases interacting with cytochrome oxidase is equivocal, in part because there is little robust data about their steady state concentrations. A reasonable case can be made for NO, and perhaps CO and H(2)S, inhibiting cytochrome oxidase in vivo, but endogenous levels of HCN seem unlikely to be high enough.
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              Is Open Access

              The mitochondrial permeability transition pore: Molecular nature and role as a target in cardioprotection

              1 Introduction The permeability transition (PT) is an abrupt increase of the inner mitochondrial membrane (IMM) permeability to solutes, which in mammalian mitochondria has a cutoff of about 1500 Da. Occurrence of the PT and its inhibition by adenine nucleotides is known since the 1950s [1,2], and the phenomenon has been investigated in a number of laboratories (e.g. [3–13]). The term “permeability transition” was introduced in 1979 by Haworth and Hunter, who carried out a thorough characterization of its basic features in heart mitochondria, and provided the important insight – which is today generally accepted – that the PT could be due to opening of an IMM channel, the PTP [14–17]. This hypothesis was confirmed by patch-clamp studies on mammalian mitoplasts, which revealed the presence of a high-conductance (≈ 1 nS) channel, the mitochondrial megachannel (MMC) [18,19]. The MMC possesses all the basic features of the PTP [20,21] including sensitivity to cyclosporin A (CsA) [22], and represents the electrophysiological equivalent of the pore [23]. The study of mitochondrial channels has greatly contributed to our understanding of mitochondrial physiology, and to the acceptance of the pore theory of the PT (see [24] for a recent review). PTP opening is traditionally linked to mitochondrial dysfunction because its occurrence leads to mitochondrial depolarization, cessation of ATP synthesis, Ca2 + release, pyridine nucleotide depletion, inhibition of respiration and, in vitro at least, matrix swelling; in turn, swelling causes mobilization of cytochrome c, outer mitochondrial membrane (OMM) rupture and eventually release of proapoptotic proteins such as cytochrome c itself, endonuclease G and AIF [25,26]. It should be mentioned that these detrimental effects on energy conservation and cell viability are only seen for long-lasting openings of the PTP [27], while short-term openings – which have been documented both in isolated mitochondria and in situ [27–30] – may be involved in physiological regulation of Ca2 + and reactive oxygen species (ROS) homeostasis [31], and provide mitochondria with a fast mechanism for Ca2 + release [32–35]. The potential role of the PTP in heart injury has been recognized very early [36,37], well before the role of mitochondria in apoptosis was discovered [38–40]. PTP desensitization with CsA proved beneficial in heart ischemia–reperfusion injury, as well as in pre- and post-conditioning through mechanisms that await clarification [41–49]. Matrix Ca2 + is an essential permissive factor for PTP opening, but the role of mitochondrial “Ca2 + overload” as a causative event in I/R injury of the heart has recently been challenged. In MCU null mitochondria – where Ca2 + overload does not occur during reperfusion – the extent of necrosis was the same as that observed in the hearts from wild type littermates, and the cardioprotective effect of CyPD ablation was abrogated [50]. These surprising observations raise many issues that still await an answer, such as the cause of cell death, the mechanism of activation of mitochondrial metabolism and the mechanism of PTP opening in MCU null mice. Yet these experiments do show that cardiomyocyte cell death can occur without mitochondrial “Ca2 + overload”; and suggest that there is enough Ca2 + in the matrix of MCU null mitochondria to allow pore PTP opening, possibly a consequence of the burst of ROS that follows reperfusion [31]. 2 Molecular nature of the permeability transition pore: the early days The molecular nature of the PTP has been the matter of debate for the last 30 years. In the early 1990s Snyder and coworkers found that the peripheral benzodiazepine receptor, an OMM protein today called TSPO [51], copurified with the adenine nucleotide translocator (ANT) and the voltage-dependent anion channel (VDAC) in protocols based on detergent extraction followed by hydroxylapatite chromatography; radiolabeled high-affinity ligands of TSPO were recovered in fractions where TSPO could be detected together with VDAC and ANT [52]. This finding was of great interest because nanomolar concentrations of the same TSPO ligands affected the channel properties of MMC in electrophysiological experiments, suggesting that all of these proteins could be involved in formation of the PTP [53]. This suggestion was strengthened a few years later by work from the Brdiczka laboratory during the characterization of OMM and IMM “contact sites”, i.e. specialized structures where the two membranes form close contacts mediated by protein–protein interactions [54]. These sites would include hexokinase on the cytosolic surface of, and VDAC within, the OMM, creatine kinase and nucleoside diphosphate kinase in the intermembrane space, and ANT in the IMM; they were proposed to mediate channeling of adenine nucleotides to and from mitochondria [54–56]. The link with the PTP was made when the same laboratory showed that hexokinase-enriched fractions from low detergent extracts of mitochondria formed channels with the conductance expected of the PTP, and conferred permeability properties to liposomes that could be inhibited by N-methylVal-4-cyclosporin [57]. It must be stressed that the preparation contained a very large number of proteins, which makes assignment of the channel activity to a specific species quite problematic. Furthermore – and unlike the case of PTP – currents were inhibited rather than induced by atractylate, and the active fractions were not enriched in VDAC and/or ANT [57]. The same preparations were shown to also contain proteins of the Bcl-2 family [58], and this set of observations led to a model where the PTP would be a multiprotein complex spanning both mitochondrial membranes and comprising ANT, VDAC, TSPO, cyclophilin (CyP) D as well as hexokinase and Bcl-2 proteins [59]. This model did not stand the test of genetics, as a CsA-sensitive PT could be easily detected in the absence of ANT [60], VDAC [61,62] as well as of TSPO [63]. An alternative model is the formation of the PTP by the Pi carrier following its interaction with CyP-D and ANT [64]. However, results obtained by patch-clamp analysis of the reconstituted Pi carrier do not match the electrophysiological PTP features [65] and genetic deletion of the Pi carrier does not support the idea that this protein is essential for PTP formation [66]. Studies on Ppif−/− mice (Ppif is the unique gene encoding CyPD in the mouse) have demonstrated that this protein is an important modulator which sensitizes the PTP to Ca2 + and confers sensitivity to CsA, but not an essential pore component [67–70]. By following the interactions of the matrix CyPD with other mitochondrial proteins it has recently been possible to identify a novel structure for the PTP, which will be described in the following paragraph. 3 The permeability transition pore forms from F-ATP synthase By monitoring the presence of CyPD in blue native gels of mitochondrial proteins Giorgio et al. discovered that CyPD interacts with the F-ATP synthase, and that it can be crosslinked to the stalk proteins b, d and OSCP [71]. Binding of CyPD to the F-ATP synthase required Pi, and caused a decrease of the enzyme's catalytic activity; while it was counteracted by CsA, which displaced CyPD and increased the catalytic activity [71]. It was then found that CyPD interacts with the OSCP subunit of F-ATP synthase [72]. Gel-purified dimers of F-ATP synthase incorporated into lipid bilayers displayed currents activated by Ca2 +, Bz-243 and phenylarsine oxide (but not atractylate) with a unit conductance of about 500 pS, which is identical to that of the bona fide mammalian MMC-PTP [72]. The channel-forming property is shared by purified F-ATP synthase dimers of yeast mitochondria, which also displayed Ca2 +-dependent currents of slightly lower conductance (about 300 pS) [73]. Furthermore, yeast strains lacking the e and/or g subunits, which are necessary for dimer formation, showed a remarkable resistance to PTP opening [73]. Although strains lacking subunits e [74] or g [75] display abnormal morphology, with balloon-shaped cristae and F-ATP synthase monomers distributed randomly in the membrane, they did develop a normal membrane potential [73], suggesting that the increased resistance to PTP opening may not depend on these structural differences. Based on these findings, it has been proposed that the PTP forms from F-ATP synthase dimers, possibly in the lipid region between two adjacent stalks [76]. The idea that the pore forms from the F-ATP synthase is also supported by two independent studies. Bonora et al. used targeted inactivation of the c subunit of F-ATP synthase – which forms the H+-transporting c ring of F-ATP synthases – to show that HeLa cells become resistant to PTP opening and cell death [77]; while Alavian et al. reconstituted the c subunit or the purified F-ATP synthase in liposomes, and measured Ca2 +-activated channels [78] with properties similar to those described by Giorgio et al. with purified dimers [72]. It is not possible to derive mechanistic insights about the nature of the PTP-forming channel from the study of Bonora et al. because the consequences of knockdown of the c subunit on other components of the F-ATP synthase and on other mitochondrial proteins were not addressed, and it is unclear whether and how many functional F-ATP synthases were left after the knockdown of the c subunit [77]. Alavian et al., on the other hand, suggested that the channel of the PTP forms within the c ring itself after Ca2 +-dependent extrusion of F1, i.e. of the γ subunit [78]. We think that this hypothesis is extremely unlikely for the following reasons: • Displacement of F1 from FO requires very drastic conditions, such as treatment with 2 M urea [79] yet a functional FOF1 complex can be easily reconstituted after treatment with urea, indicating that the γ/δ/ε subunit reinserts into FO. It is hard to envision a plausible mechanism through which matrix Ca2 + could cause release of F1, and then create within FO a channel that cannot be closed by subunit γ/δ/ε [78]. • Alavian et al. reported that the “FO channel” can instead be closed by the β subunit, and suggested that this is the mechanism through which pore closure occurs in situ [78]. There are major problems with this proposal, because structural studies have established that subunit β does not interact with the c ring [80]; and it is not obvious where the free β subunit would come from, given the extreme resistance of the F1 subcomplex to denaturation. This hypothesis is also difficult to reconcile with the well established fact that PTP–MMC opening is readily and fully reversible upon chelation of Ca2 + in mitoplasts [21], intact mitochondria [81] as well as in reconstituted dimers of F-ATP synthase [72]. • Channel openings were also seen with preparations of the whole F-ATP synthase, and these could be inhibited by CsA after the addition of Ca2 + [78]. If the mechanism of pore opening is “expulsion” of F1 by Ca2 +, it is not easy to explain how the current could be inhibited by CsA. Indeed, it is firmly established that CsA inhibits the pore by removing CyPD, which in turn interacts with F1, not FO [71,72]. • F1 has binding sites that can accommodate directly the effects of Ca2 +, Mg2 +, adenine nucleotides and Pi; and through CyPD (un)binding those of H+, CsA and possibly of oxidants [82]. Any model of the pore must account for all inducers and inhibitors, which appear difficult to fit in the c ring, a multimer of identical c subunits. • Silencing of the ATP5E gene, which encodes the ε subunit, resulted in downregulation of the F-ATP synthase complex with accumulation of subunit c, yet mitochondria were more coupled [83], which is the opposite of what would be expected if the isolated c ring can form membrane channels. • McGeoch and coworkers have performed patch-clamp studies of highly purified c subunit (which gave a single silver-stained band and was validated by sequencing) with very different results, as currents were inhibited rather than activated by Ca2 + [84–86]. It is legitimate to wonder whether other F-ATP synthase components were present in the preparation of Alavian et al. that could explain this discrepancy. Given that in our hands the PTP-MMC readily forms from F-ATP synthase dimers but not monomers [72]; and that inactivation of the “dimerization” subunits e and g in Saccharomyces cerevisiae increases resistance of the PTP to Ca2 + [73], we favor the idea that the pore forms at the interface between two monomers in the dimeric enzyme, as we will discuss further after covering the regulatory role of CyPD. 4 Modulation by cyclophilin D and cyclosporin A CyPs are ubiquitous, conserved proteins possessing peptidyl prolyl cis-trans isomerase activity [87–89]. Sixteen isoforms have been found in man, and the most abundant (and the first to be discovered) is cytosolic CyPA [90]. The enzymatic activity of all CyPs is inhibited by CsA [91] and the CsA/CyPA complex inhibits the cytosolic phosphatase calcineurin [92]; as a result, NFAT is no longer dephosphorylated, an event that prevents its nuclear translocation causing immunosuppression [93,94]. Mammals possess a unique mitochondrial species called CyPD, which in the mouse is encoded by the Ppif gene (see [95] for a review). CyPD is the mitochondrial receptor for CsA and modulates the PTP, but it is not a structural pore component. Indeed, the PTP can still open in mitochondria from Ppif−/− mice, although higher Ca2 + loads are required [67–70]. Regulation by CyPD may be a relatively recent evolutionary event [96], since the PTPs of S. cerevisiae and D. melanogaster are insensitive to CsA [97,98]. As also discussed elsewhere, the effect of CsA on the mammalian PTP is best described as “desensitization” in the sense that the PTP can still occur but becomes more resistant to Ca2 +, Pi and other inducers [25,76]. This consideration is important because (i) CsA can desensitize but not block the PTP, and therefore lack of sensitivity to CsA does not necessarily imply that the PTP is not involved in the event being studied; and (ii) different cells express different levels of CyPD, and obviously only CyPD-expressing mitochondria can respond to CsA [99]. CyPD binds the lateral stalk of F-ATP synthase (OSCP, b and d subunits) [71]. Like PTP induction, binding requires Pi (and results in partial inhibition of ATP synthase activity); while CsA displaces CyPD resulting in enzyme reactivation [71]. We have recently identified the binding site of CyPD to the OSCP subunit, possibly in a region comprising helices 3 and 4 [72], which is also the binding site of Bz-423 [100,101]. In keeping with PTP formation by F-ATP synthase, decreased levels of OSCP halved the threshold Ca2 + load required for PTP opening [72]. As discussed in detail elsewhere [72,76] we assume that the PTP forms within the IMM at the interface between two adjacent FO sectors. Matrix Ca2 + would have an essential permissive role in PTP formation after binding to the catalytic Me2 +-binding site, which is usually occupied by Mg2 +, and could be influenced by OSCP. Our working hypothesis is that OSCP as such is a “negative” modulator, whose effect can be counteracted by binding of the “positive” effector CyPD (which indeed decreases the threshold Ca2 + required for PTP opening). Removal of OSCP, or CyPD binding to OSCP, would induce similar conformational effects on the rigid stalk proteins, leading to increased probability of PTP opening at the IMM — a working hypothesis that awaits experimental testing. We note that PTP formation at the membrane interface between two stalks could also accommodate the PTP-modulating effects of fatty acids [5–7,102]. The role of cardiolipin should also be explored, as it stabilizes respiratory supercomplexes [103] and, due to its partitioning into high-curvature membrane regions, plays a role in cristae formation and morphology [104]. Indeed, cardiolipin increases the degree of oligomerization of F-ATP synthase by promoting the formation of extended dimer rows, which is compromised in D. melanogaster mutants defective for cardiolipin synthesis [104]. The high susceptibility of cardiolipin to oxidation might alter F-ATP synthase conformation, affecting in turn the PTP open probability. 5 Regulation of the permeability transition by the outer mitochondrial membrane The PT is an inner membrane event, since it also occurs in mitoplasts, i.e. mitochondria stripped of the OMM [105], yet the OMM does play a role in pore modulation. Lê-Quôc and Lê-Quôc were the first to show that induction of the PTP by substituted maleimides requires the OMM [106]. We have confirmed that PTP opening by N-ethylmaleimide is no longer present in mitoplasts [63] and extended the “sensitizing” role of the OMM to protocols where the PTP is modulated by dicarboxylic porphyrins plus visible light, a treatment that leads to the efficient production of singlet oxygen [107]. Low light doses inactivate the PTP through degradation of hystidyl residues, which in turn prevents matrix cysteine oxidation [108], possibly through a conformational change; while higher light doses activate the PTP through OMM cysteine oxidation [109]. PTP activation strictly required an intact OMM, since the inducing effect of hematoporphyrin plus light was completely lost in mitoplasts [105]. Largely based on the effect of its ligands on the PTP, it was proposed that the OMM protein responsible for PTP sensitization was the peripheral benzodiazepine receptor (today called TSPO) [52,53,105,110–112], but this turned out to be incorrect. It had been known for some time that many cellular effects of “TSPO ligands” were not due to an interaction with TSPO, suggesting the existence of a different site of action [113,114]. The relevant target for PTP modulation, however, was identified only recently by 2 independent sets of observations. The Glick laboratory discovered that “TSPO ligands” (including the benzodiazepine Bz-423 and PK11195) interact with the mitochondrial F-ATP synthase and affect its activity [100,101,115,116]; while Giorgio et al. demonstrated that Bz-423 mimics the PTP-inducing effects of CyPD, and is able to favor the Ca2 +- and oxidant-induced transition of F-ATP synthase dimers to unselective high-conductance channels [72]. Thus, TSPO ligands directly modulate the propensity of F-ATP synthase to form channels; and it may therefore come as no surprise that mitochondria from mice with genetic ablation of TSPO (which completely lack high-affinity binding sites for PK11195) respond with PTP induction to PK11195, N-ethylmaleimide and photooxidative stress [63]. Thus, TSPO is not responsible for the PTP-modulating effects of “TSPO ligands”, and the protein(s) responsible for pore induction by N-ethylmaleimide and photooxidative stress await clarification. A potential candidate is Abcb6, an ATP binding cassette transporter of the OMM involved in heme and porphyrin homeostasis [117]. It is worth mentioning that the vast majority of F-ATP synthase dimers is located in rows of oligomers inside cristae [75,118,119] where a direct interaction with the OMM is not possible. Thus, either the PTP forms in the small population of dimers facing the intermembrane space, where direct contact with the OMM can occur; or the effect of the OMM is exerted by controlling the diffusion of PTP-regulating metabolites and ions, including Ca2 + itself [120,121] in a process that would be greatly favored by, and contribute to, cristae remodeling [122]. The OMM may also affect the outcome of PTP opening without directly affecting its open-closed transitions. Indeed, it has been shown that the PT causes matrix swelling and OMM rupture only in the presence of Bax and Bak, whose genetic ablation confers OMM resistance to swelling, thus preventing organelle rupture and cell death [123]. 6 Cyclosporin A and cardioprotection Treatment with CsA confers remarkable protection against acute myocardial injury induced by post-ischemic reperfusion [37], and this is matched by genetic ablation of CyPD [67,69], which suggests that the protective effects of CsA depend on CyPD inhibition and, by inference, on PTP desensitization. Cardioprotection by CsA has been described in a wide variety of experimental models and animal species including humans [124]. All in all, we think that CsA provided a terrific proof of concept about the causative role of the PTP in I/R injury of the heart, and as a target for cardioprotection. There may be exceptions, however, as lack of protection by CsA has been reported in in vivo I/R in rat [125] and pig hearts [126], while a recent report has instead confirmed the cardioprotective efficacy in pig hearts [127]. The basis for these discrepancies is not immediately obvious, but key elements could be the duration of ischemia, which determines severity of damage [128], and CsA dosage [37]. In an apparent paradox, in perfused hearts of Ppif−/− (CyPD null) mice the extent of necrosis increased when reperfusion was established after a relatively short ischemic episode (30 min), while the expected protection was observed when ischemia was prolonged to 60 min [128]. Additional studies should address the factors involved in mild I/R damage that are not affected by treatments targeting CyPD. Regarding dosage, it should be recalled that the protective effect of CsA is observed in a very narrow dosage window; this was first shown in perfused rat hearts where protection was seen at 0.2 but not 1 μM [37], a finding that has been confirmed by several laboratories, including ours, and never disputed. It seems possible that the effective CsA concentration may differ in different species, and therefore that conditions defined as optimal in one model may prove ineffective in others. The limitations discussed above, however, must be seriously taken into account when devising possible clinical applications for CsA, also considering the potentially adverse effects of prolonged PTP inhibition in failing hearts [129]. 7 Additional effects of cyclophilin D and cyclosporin A In the mouse CyPD is encoded by a unique nuclear gene (Ppif), and the transcript includes a matrix targeting sequence that is removed from the protein after mitochondrial import [130]. Consistently, the protein localizes to the mitochondrial matrix as detected both by electron microscopy and by trypsin titrations of mitochondrial fractions [131,132]. Protection afforded by deletion of CyPD or its inhibition is generally referred to its localization in the mitochondrial matrix, which allows regulatory interactions with F-ATP synthase and the PTP. CyPD has been proposed as a key interactor for the Hsp90–Trap-1 complex [133] and for p53 [134]. By sequestering a relevant fraction of CyPD these proteins would reduce the probability of PTP opening thus favoring survival of cancer cells, a provocative hypothesis that is the subject of controversy [135]. Genetic ablation of CyPD also caused mild ER stress, as judged on the basis of increased phosphorylation of eIF2a and expression of GRP78 without changes of the potentially detrimental CHOP [136]. This mild ER stress appears necessary to protect the heart against I/R injury by preventing the severe ER stress associated with ischemia and reperfusion. This concept is supported by the observation that inhibition of ER stress by tauroursodeoxycholic acid abrogated cardioprotection resulting from CyPD ablation or inhibition, while a moderate ER stress induced by tunicamycin reduced post-ischemic reperfusion injury [136]. More recent work from the Ovize laboratory suggests that CyPD contributes to Ca2 + trafficking between ER/SR and mitochondria by binding to a protein complex which also includes VDAC1, Grp75 and IP3R1 [137]. This complex appears to be located at the interface between the OMM and the ER, and may facilitate the transfer of Ca2 + released from the ER into the mitochondrial matrix [138]. Interestingly, the CyPD–VDCA1–Grp75–IP3R1 interaction was facilitated by mitofusin 2, and increased under conditions of hypoxia and reoxygenation [137]. This complex may be extremely relevant because the genetic ablation or the pharmacological inhibition of any of its members decreased the occurrence of cell death induced by protocols of anoxia/reoxygenation or ischemia/reperfusion [137]. Whether this additional role for CyPD is relevant to PTP regulation in relation to Ca2 + is an open question. PTP opening does not depend on VDAC [61,62], and mitochondrial Ca2 + uptake occurs through MCU in a Δψm-dependent process [139,140]. PTP opening curtails mitochondrial Ca2 + uptake both by disrupting Δψm and by providing a possible pathway for Ca2 + efflux [32–35], consistent with the finding that CyPD ablation or inhibition leads to an increase of matrix [Ca2 +] [34,129,141]. An obvious question is whether can CyPD also be found outside the matrix and in the ER/SR. This question applies both to CyPD interactions with the VDAC1–Grp75–IP3R1 complex, and to those with other proteins shown to bind CyPD mostly by immunoprecipitation such as Bcl-2 [142], p53 [134,135], GSK-3 [131] and the Hsp90–Trap-1 complex [133]. These findings would imply that a fraction of CyPD is localized at sites other than the mitochondrial matrix, or that under specific pathophysiological conditions CyPD translocates to other cellular sites. Until such mechanism is identified, chances remain that results obtained with detergent extraction and immunoprecipitation may not reflect the protein–protein interactions involving CyPD in situ. It should also be mentioned that the effects of CyPD on proteins located outside mitochondria need not be only due to direct protein–protein interactions, but might also be related to functional modifications induced by CyPD deletion or inhibition, as well as by covalent changes in response to the activation of signaling pathways [143]. These include (de)phosphorylation [131], (de)acetylation [144], nitrosylation [82,145] and oxidation of Cys203, which inhibits the enzymatic activity of CyPD and plays a crucial role in favoring PTP opening. Importantly, expression of a CyPDC203S mutant desensitized the PTP to both Ca2 +- and H2O2 providing a mechanistic link between oxidative stress and PTP opening [82]. This wide array of CyPD modifications, which has largely been characterized in E. Murphy's laboratory, is likely to affect mitochondrial metabolism, eventually resulting in variations of responses to physiological and pathological stimuli. In keeping with this possibility ablation of CyPD causes significant changes in the level of mitochondrial proteins involved in intermediary metabolism [146] as well as in the mitochondrial acetylome [147]. Interestingly, increased acetylation of β-hydroxyacyl-CoA dehydrogenase resulted in a 50% decrease of its activity [147], which may explain the decreased fatty acid oxidation observed in Ppif−/− hearts [129]. CsA inhibits all CyP isoforms, and this can be an important confounder in evaluating its mitochondrial effects. Indeed, inhibition of calcineurin, which is mediated by the complex of CsA with cytosolic CyPA [92,93], prevents dephosphorylation of the pro-fission protein Drp-1 at Ser637, thus hampering its mitochondrial translocation and therefore fragmentation, a cytoprotective mitochondrial effect of CsA that is not related to PTP inhibition [148,149]. Of note, genetic ablation or pharmacological inhibition of Drp1 has been shown to afford significant protection against cardiomyocyte injury caused by ceramide, hyperglycemia and post-ischemic reperfusion [150–152]. This effect of CsA may be counteracted by other processes in the context of myocardial ischemia. Thus, lack of Ser637 dephosphorylation due to calcineurin inhibition can be contrasted by the activating effect of Ser616 phosphorylation [153], a process catalyzed by various protein kinases including PKCδ that is generally considered detrimental for the survival of ischemic cardiomyocytes [153]. The protective effect of CsA could be further limited by direct stimulation of HIF-1α Pro564 hydroxylation, which leads to increased removal of HIF-1α and may thus prevent adaptation to hypoxia, an effect originally described in glioma cells [154] that should now be investigated in cardiomyocytes. 8 Summary and perspectives The discovery that the PTP forms from the F-ATP synthase is redirecting research toward the mechanisms that switch this key enzyme from an energy-conserving to an energy-dissipating device. These hold great promise to improve our understanding of the pathophysiological events that trigger the transition in heart diseases, and to set a logical frame for therapeutic strategies. CyPD remains a viable target, and we are confident that the current hurdles between preclinical studies and clinical application of PTP-inhibitory strategies will be overcome by more specific inhibitors of CyP isoforms [155], by drugs targeting the PTP at sites other than CyPD [156] and by their combinatorial use. Conflict of interest The authors declare no conflict of interest.
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                Author and article information

                Contributors
                Journal
                Redox Biol
                Redox Biol
                Redox Biology
                Elsevier
                2213-2317
                17 August 2016
                October 2016
                17 August 2016
                : 9
                : 188-197
                Affiliations
                [a ]Departments of Environmental Health Sciences, University of Alabama at Birmingham, Birmingham, AL 35294, United States
                [b ]Departments of Pathology, University of Alabama at Birmingham, Birmingham, AL 35294, United States
                [c ]Departments of Neurosurgery, University of Alabama at Birmingham, Birmingham, AL 35294, United States
                Author notes
                [* ]Corresponding author at: Department of Pathology, University of Alabama at Birmingham, Volker Hall, Room G019B, 1670 University Boulevard, Birmingham, AL 35294, United States.Department of Pathology, University of Alabama at BirminghamVolker Hall, Room G019B, 1670 University BoulevardBirminghamAL35294United States shannonbailey@ 123456uabmc.edu
                [1]

                Equal contributions from ALK and SKM.

                [2]

                Current address: Department of Biology and Public Health, 1100 S Marietta Pkwy, Marietta, GA 30060, United States.

                [3]

                Current address: Department of Medicine, Queen's University, Kingston ON, Canada K7L 3N6.

                Article
                S2213-2317(16)30082-9
                10.1016/j.redox.2016.08.005
                5007436
                27566282
                d00fa7bc-3a30-41f7-9a99-78e50d1a506f
                © 2016 The Authors

                This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).

                History
                : 22 July 2016
                : 15 August 2016
                : 16 August 2016
                Categories
                Research Paper

                alt, alanine aminotransferase,cn-page, clear native polyacrylamide gel electrophoresis,csa, cyclosporin a,gsh, glutathione,hif1α, hypoxia-inducible factor 1 alpha,inos, inducible nitric oxide synthase,mpt, mitochondrial permeability transition,no, nitric oxide,onoo-, peroxynitrite,rcr, respiratory control ratio,rns, reactive nitrogen species,ros, reactive oxygen species,sam, s-adenosylmethionine,o2•-, superoxide anion,liver,alcohol,s-adenosylmethionine,mitochondria,hypoxia,nitric oxide

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