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      Artificial Metalloenzymes: From Selective Chemical Transformations to Biochemical Applications

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          Abstract

          Artificial metalloenzymes (ArMs) comprise a synthetic metal complex in a protein scaffold. ArMs display performances combining those of both homogeneous catalysts and biocatalysts. Specifically, ArMs selectively catalyze non-natural reactions and reactions inspired by nature in water under mild conditions. In the past few years, the construction of ArMs that possess a genetically incorporated unnatural amino acid and the directed evolution of ArMs have become of great interest in the field. Additionally, biochemical applications of ArMs have steadily increased, owing to the fact that compartmentalization within a protein scaffold allows the synthetic metal complex to remain functional in a sea of inactivating biomolecules. In this review, we present updates on: (1) the newly reported ArMs, according to their type of reaction, and (2) the unique biochemical applications of ArMs, including chemoenzymatic cascades and intracellular/in vivo catalysis. We believe that ArMs have great potential as catalysts for organic synthesis and as chemical biology tools for pharmaceutical applications.

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          Most cited references125

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          Adding new chemistries to the genetic code.

          The development of new orthogonal aminoacyl-tRNA synthetase/tRNA pairs has led to the addition of approximately 70 unnatural amino acids (UAAs) to the genetic codes of Escherichia coli, yeast, and mammalian cells. These UAAs represent a wide range of structures and functions not found in the canonical 20 amino acids and thus provide new opportunities to generate proteins with enhanced or novel properties and probes of protein structure and function.
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            Directed Evolution: Bringing New Chemistry to Life

            Tailor‐made: Discussed herein is the ability to adapt biology's mechanisms for innovation and optimization to solving problems in chemistry and engineering. The evolution of nature's enzymes can lead to the discovery of new reactivity, transformations not known in biology, and reactivity inaccessible by small‐molecule catalysts.
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              Methods for the directed evolution of proteins.

              Directed evolution has proved to be an effective strategy for improving or altering the activity of biomolecules for industrial, research and therapeutic applications. The evolution of proteins in the laboratory requires methods for generating genetic diversity and for identifying protein variants with desired properties. This Review describes some of the tools used to diversify genes, as well as informative examples of screening and selection methods that identify or isolate evolved proteins. We highlight recent cases in which directed evolution generated enzymatic activities and substrate specificities not known to exist in nature.
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                Author and article information

                Contributors
                Role: Academic Editor
                Journal
                Molecules
                Molecules
                molecules
                Molecules
                MDPI
                1420-3049
                30 June 2020
                July 2020
                : 25
                : 13
                : 2989
                Affiliations
                [1 ]National Institute of Advanced Industrial Science and Technology, Ikeda, Osaka 563-8577, Japan; t-himiyama@ 123456aist.go.jp
                [2 ]DBT-AIST International Laboratory for Advanced Biomedicine (DAILAB), Ikeda, Osaka 563-8577, Japan
                [3 ]Frontier Research Institute for Interdisciplinary Sciences, Tohoku University, 6-3 Aramaki aza Aoba, Aoba-ku, Sendai 980-8578, Japan
                Author notes
                [* ]Correspondence: yasunori.okamoto@ 123456tohoku.ac.jp ; Tel.: +81-22-795-5264
                Author information
                https://orcid.org/0000-0001-5252-1834
                https://orcid.org/0000-0002-2442-6079
                Article
                molecules-25-02989
                10.3390/molecules25132989
                7411666
                32629938
                c90a4baf-5053-4976-b04f-05dbe0bc3966
                © 2020 by the authors.

                Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license ( http://creativecommons.org/licenses/by/4.0/).

                History
                : 26 May 2020
                : 27 June 2020
                Categories
                Review

                artificial metalloenzyme,organometallic catalysis,protein engineering,selective chemical transformation,chemoenzymatic cascade,directed evolution,intracellular catalysis

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