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      Characterization of SLITRK1 Variation in Obsessive-Compulsive Disorder

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          Abstract

          Obsessive compulsive disorder (OCD) is a syndrome characterized by recurrent and intrusive thoughts and ritualistic behaviors or mental acts that a person feels compelled to perform. Twin studies, family studies, and segregation analyses provide compelling evidence that OCD has a strong genetic component. The SLITRK1 gene encodes a developmentally regulated stimulator of neurite outgrowth and previous studies have implicated rare variants in this gene in disorders in the OC spectrum, specifically Tourette syndrome (TS) and trichotillomania (TTM). The objective of the current study was to evaluate rare genetic variation in SLITRK1 in risk for OCD and to functionally characterize associated coding variants. We sequenced SLITRK1 coding exons in 381 individuals with OCD as well as in 356 control samples and identified three novel variants in seven individuals. We found that the combined mutation load in OCD relative to controls was significant ( p = 0.036). We identified a missense N400I change in an individual with OCD, which was not found in more than 1000 control samples (P<0.05). In addition, we showed the the N400I variant failed to enhance neurite outgrowth in primary neuronal cultures, in contrast to wildtype SLITRK1, which enhanced neurite outgrowth in this assay. These important functional differences in the N400I variant, as compared to the wildtype SLITRK1 sequence, may contribute to OCD and OC spectrum symptoms. A synonymous L63L change identified in an individual with OCD and an additional missense change, T418S, was found in four individuals with OCD and in one individual without an OCD spectrum disorder. Examination of additional samples will help assess the role of rare SLITRK1 variation in OCD and in related psychiatric illness.

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          Most cited references22

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          Synonymous mutations in the human dopamine receptor D2 (DRD2) affect mRNA stability and synthesis of the receptor.

          J. Duan (2003)
          Although changes in nucleotide sequence affecting the composition and the structure of proteins are well known, functional changes resulting from nucleotide substitutions cannot always be inferred from simple analysis of DNA sequence. Because a strong synonymous codon usage bias in the human DRD2 gene, suggesting selection on synonymous positions, was revealed by the relative independence of the G+C content of the third codon positions from the isochoric G+C frequencies, we chose to investigate functional effects of the six known naturally occurring synonymous changes (C132T, G423A, T765C, C939T, C957T, and G1101A) in the human DRD2. We report here that some synonymous mutations in the human DRD2 have functional effects and suggest a novel genetic mechanism. 957T, rather than being 'silent', altered the predicted mRNA folding, led to a decrease in mRNA stability and translation, and dramatically changed dopamine-induced up-regulation of DRD2 expression. 1101A did not show an effect by itself but annulled the above effects of 957T in the compound clone 957T/1101A, demonstrating that combinations of synonymous mutations can have functional consequences drastically different from those of each isolated mutation. C957T was found to be in linkage disequilibrium in a European-American population with the -141C Ins/Del and TaqI 'A' variants, which have been reported to be associated with schizophrenia and alcoholism, respectively. These results call into question some assumptions made about synonymous variation in molecular population genetics and gene-mapping studies of diseases with complex inheritance, and indicate that synonymous variation can have effects of potential pathophysiological and pharmacogenetic importance.
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            Slitrk5 deficiency impairs corticostriatal circuitry and leads to obsessive-compulsive-like behaviors in mice.

            Obsessive-compulsive disorder (OCD) is a common psychiatric disorder defined by the presence of obsessive thoughts and repetitive compulsive actions, and it often encompasses anxiety and depressive symptoms. Recently, the corticostriatal circuitry has been implicated in the pathogenesis of OCD. However, the etiology, pathophysiology and molecular basis of OCD remain unknown. Several studies indicate that the pathogenesis of OCD has a genetic component. Here we demonstrate that loss of a neuron-specific transmembrane protein, SLIT and NTRK-like protein-5 (Slitrk5), leads to OCD-like behaviors in mice, which manifests as excessive self-grooming and increased anxiety-like behaviors, and is alleviated by the selective serotonin reuptake inhibitor fluoxetine. Slitrk5(-/-) mice show selective overactivation of the orbitofrontal cortex, abnormalities in striatal anatomy and cell morphology and alterations in glutamate receptor composition, which contribute to deficient corticostriatal neurotransmission. Thus, our studies identify Slitrk5 as an essential molecule at corticostriatal synapses and provide a new mouse model of OCD-like behaviors.
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              NeuriteTracer: a novel ImageJ plugin for automated quantification of neurite outgrowth.

              In vitro assays to measure neuronal growth are a fundamental tool used by many neurobiologists studying neuronal development and regeneration. The quantification of these assays requires accurate measurements of neurite length and neuronal cell numbers in neuronal cultures. Generally, these measurements are obtained through labor-intensive manual or semi-manual tracing of images. To automate these measurements, we have written NeuriteTracer, a neurite tracing plugin for the freely available image-processing program ImageJ. The plugin analyzes fluorescence microscopy images of neurites and nuclei of dissociated cultured neurons. Given user-defined thresholds, the plugin counts neuronal nuclei, and traces and measures neurite length. We find that NeuriteTracer accurately measures neurite outgrowth from cerebellar, DRG and hippocampal neurons. Values obtained by NeuriteTracer correlate strongly with those obtained by semi-manual tracing with NeuronJ and by using a sophisticated analysis package, MetaXpress. We reveal the utility of NeuriteTracer by demonstrating its ability to detect the neurite outgrowth promoting capacity of the rho kinase inhibitor Y-27632. Our plugin is an attractive alternative to existing tracing tools because it is fully automated and ready for use within a freely accessible imaging program.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, USA )
                1932-6203
                2013
                21 August 2013
                : 8
                : 8
                : e70376
                Affiliations
                [1 ]John P. Hussman Institute for Human Genomics, University of Miami Miller School of Medicine, Miami, Florida, United States of America
                [2 ]Department of Neuroscience, University of Miami Miller School of Medicine, Miami, Florida, United States of America
                [3 ]Seaver Autism Center for Research and Treatment, Department of Psychiatry, and the Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America
                [4 ]Child Psychiatry Department, Robert Debré Hospital, Paris, France & Human Genetics and Cognitive Functions, Institut Pasteur, Paris, France
                [5 ]Institut National de la Santé et de la Recherche Médicale U952, and Centre National de la Recherche Scientifique UMR 7224 and Université Pierre et Marie Curie, Paris, France
                [6 ]Department of Psychiatry and Psychotherapy, University of Cologne, Cologne, Germany
                [7 ]Department of Psychiatry and Psychotherapy, University of Homburg, Homburg, Germany
                [8 ]Department of Psychiatry and Psychotherapy, University of Greifswald, Stralsund, Germany
                [9 ]Department of Psychiatry and Psychotherapy, University of Bonn, Bonn, Germany
                [10 ]Laboratory of Clinical Science, National Institute of Mental Health Intramural Research Program, Bethesda, Maryland, United States of America
                [11 ]Division of Tics, Obsessive-Compulsive and Related Disorders, Department of Psychiatry, and the Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America
                Institute of Psychiatry at the Federal University of Rio de Janeiro, Brazil
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                Conceived and designed the experiments: UO GC YK JDB SZ DEG. Performed the experiments: UO GC YK. Analyzed the data: UO GC YK SY VM JDB SZ DEG. Contributed reagents/materials/analysis tools: SY VM RD CB SR PF HJG WM MW LL RM DLM. Wrote the paper: UO JDB SZ DEG. Final approval: UO GC YK SY VM RD CB SR PF HJG WM MW LL RM DLM JDB SZ DEG.

                [¤a]

                Current address: Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, New York, United States of America

                [¤b]

                Current address: Department of Biostatistics, Mailman School of Public Health at Columbia University, New York, New York, United States of America

                Article
                PONE-D-12-29728
                10.1371/journal.pone.0070376
                3749144
                23990902
                c7a25dbb-d7ad-4b35-8fcd-4e59933b548c
                Copyright @ 2013

                This is an open-access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.

                History
                : 19 September 2012
                : 18 June 2013
                Page count
                Pages: 7
                Funding
                This work was supported by the National Institutes of Health under Ruth L. Kirschstein National Research Service Award (UO; F31MH086275), the Lois Pope LIFE Fellowship (UO), the Beatrice and Samuel A. Seaver Foundation (JDB), and the New Jersey Center for Tourette Syndrome and Associated Disorders and the National Tourette Syndrome Association (DEG), the German Research Foundation DFG (PF, MW, WM, HJG, grant Fa 731/6) and Fondamental Foundation, Creteil, France (R.D). The funders had no role in the study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Biology
                Computational Biology
                Genomics
                Genome Analysis Tools
                Genetic Screens
                Genetics
                Gene Function
                Genetic Mutation
                Genetic Screens
                Genomics
                Genome Analysis Tools
                Genetic Screens
                Neuroscience
                Cellular Neuroscience
                Neuronal Morphology
                Medicine
                Mental Health
                Psychiatry
                Anxiety Disorders

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