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      Comparative Anticancer Potentials of Taxifolin and Quercetin Methylated Derivatives against HCT-116 Cell Lines: Effects of O-Methylation on Taxifolin and Quercetin as Preliminary Natural Leads

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          Abstract

          Six flavonoids present in Pulicaria jaubertii, i.e., 7,3′-di- O-methyltaxifolin ( 1), 3′- O-methyltaxifolin ( 2), 7- O-methyltaxifolin ( 3), taxifolin ( 4), 3- O-methylquercetin ( 5), and quercetin ( 6), were tested for their anticancer activities. The methylated flavonoids, compounds 13 and 5, were evaluated for their anticancer activities in comparison to the non-methylated parent flavonoids taxifolin ( 4) and quercetin ( 6). The structures of the known compounds were reconfirmed by spectral analyses using 1H and 13C NMR data comparisons and HRMS spectrometry. The anticancer activity of these compounds was evaluated in colon cancer, HCT-116, and noncancerous, HEK-293, cell lines using the MTT antiproliferative assays. The caspase-3 and caspase-9 expressions and DAPI (4′, 6-diamidino-2-phenylindole) staining assays were used to evaluate the apoptotic activity. All the compounds exhibited antiproliferative activity against the HCT-116 cell line with IC 50 values at 33 ± 1.25, 36 ± 2.25, 34 ± 2.15, 32 ± 2.35, 34 ± 2.65, and 36 ± 1.95 μg/mL for compounds 1 to 6, respectively. All the compounds produced a significant reduction in HCT-116 cell line proliferation, except compounds 2 and 6. The viability of the HEK-293 normal cells was found to be significantly higher than the viability of the cancerous cells at all of the tested concentrations, thus suggesting that all the compounds have better inhibitory activity on the cancer cell line. Apoptotic features such as chromatin condensation and nuclear shrinkage were also induced by the compounds. The expression of caspase-3 and caspase-9 genes increased in HCT-116 cell lines after 48 h of treatment, suggesting cell death by the apoptotic pathways. The molecular docking studies showed favorable binding affinity against different pro- and antiapoptotic proteins by these compounds. The docking scores were minimum as compared to the caspase-9, caspase-3, Bcl-xl, and JAK2.

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          AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading.

          AutoDock Vina, a new program for molecular docking and virtual screening, is presented. AutoDock Vina achieves an approximately two orders of magnitude speed-up compared with the molecular docking software previously developed in our lab (AutoDock 4), while also significantly improving the accuracy of the binding mode predictions, judging by our tests on the training set used in AutoDock 4 development. Further speed-up is achieved from parallelism, by using multithreading on multicore machines. AutoDock Vina automatically calculates the grid maps and clusters the results in a way transparent to the user. Copyright 2009 Wiley Periodicals, Inc.
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            AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility.

            We describe the testing and release of AutoDock4 and the accompanying graphical user interface AutoDockTools. AutoDock4 incorporates limited flexibility in the receptor. Several tests are reported here, including a redocking experiment with 188 diverse ligand-protein complexes and a cross-docking experiment using flexible sidechains in 87 HIV protease complexes. We also report its utility in analysis of covalently bound ligands, using both a grid-based docking method and a modification of the flexible sidechain technique. (c) 2009 Wiley Periodicals, Inc.
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              PubChem 2019 update: improved access to chemical data

              Abstract PubChem (https://pubchem.ncbi.nlm.nih.gov) is a key chemical information resource for the biomedical research community. Substantial improvements were made in the past few years. New data content was added, including spectral information, scientific articles mentioning chemicals, and information for food and agricultural chemicals. PubChem released new web interfaces, such as PubChem Target View page, Sources page, Bioactivity dyad pages and Patent View page. PubChem also released a major update to PubChem Widgets and introduced a new programmatic access interface, called PUG-View. This paper describes these new developments in PubChem.
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                Author and article information

                Journal
                ACS Omega
                ACS Omega
                ao
                acsodf
                ACS Omega
                American Chemical Society
                2470-1343
                07 December 2022
                20 December 2022
                : 7
                : 50
                : 46629-46639
                Affiliations
                []Department of Medicinal Chemistry and Pharmacognosy, College of Pharmacy, Qassim University , Qassim 51452, Saudi Arabia
                []Department of Pharmacognosy and Medicinal Plants, Faculty of Pharmacy, Al-Azhar University , Cairo 11884, Egypt
                [§ ]Department of Stem Cell Research, Institute for Research and Medical Consultations (IRMC), Imam Abdulrahman Bin Faisal University , 31441 Dammam, Saudi Arabia
                []Core Laboratories, King Abdullah University of Science and Technology (KAUST) , 23955-6900 Thuwal, Saudi Arabia
                []Smart-Health Initiative (SHI) and Red Sea Research Center (RSRC), Division of Biological and Environmental Sciences and Engineering (BESE), King Abdullah University of Science and Technology (KAUST) , Thuwal 23955-6900 , Saudi Arabia
                Author notes
                [* ]Phone: 00966566176074. Email: ham.mohammed@ 123456qu.edu.sa .
                [* ]Phone: 00201091301916. Email: ar_ehab@ 123456yahoo.com .
                Author information
                https://orcid.org/0000-0003-2896-6790
                https://orcid.org/0000-0002-6892-1530
                Article
                10.1021/acsomega.2c05565
                9774329
                36570308
                bf278afe-0dcf-4718-855a-d020295bde52
                © 2022 The Authors. Published by American Chemical Society

                Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works ( https://creativecommons.org/licenses/by-nc-nd/4.0/).

                History
                : 29 August 2022
                : 17 November 2022
                Funding
                Funded by: Ministry of Education – Kingdom of Saudi Arabi, doi 10.13039/501100011821;
                Award ID: QU-IF-1-2-2
                Categories
                Article
                Custom metadata
                ao2c05565
                ao2c05565

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