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      Unsupervised Decoding of Long-Term, Naturalistic Human Neural Recordings with Automated Video and Audio Annotations

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          Abstract

          Fully automated decoding of human activities and intentions from direct neural recordings is a tantalizing challenge in brain-computer interfacing. Implementing Brain Computer Interfaces (BCIs) outside carefully controlled experiments in laboratory settings requires adaptive and scalable strategies with minimal supervision. Here we describe an unsupervised approach to decoding neural states from naturalistic human brain recordings. We analyzed continuous, long-term electrocorticography (ECoG) data recorded over many days from the brain of subjects in a hospital room, with simultaneous audio and video recordings. We discovered coherent clusters in high-dimensional ECoG recordings using hierarchical clustering and automatically annotated them using speech and movement labels extracted from audio and video. To our knowledge, this represents the first time techniques from computer vision and speech processing have been used for natural ECoG decoding. Interpretable behaviors were decoded from ECoG data, including moving, speaking and resting; the results were assessed by comparison with manual annotation. Discovered clusters were projected back onto the brain revealing features consistent with known functional areas, opening the door to automated functional brain mapping in natural settings.

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          Most cited references44

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          Sparse coding and decorrelation in primary visual cortex during natural vision.

          Theoretical studies suggest that primary visual cortex (area V1) uses a sparse code to efficiently represent natural scenes. This issue was investigated by recording from V1 neurons in awake behaving macaques during both free viewing of natural scenes and conditions simulating natural vision. Stimulation of the nonclassical receptive field increases the selectivity and sparseness of individual V1 neurons, increases the sparseness of the population response distribution, and strongly decorrelates the responses of neuron pairs. These effects are due to both excitatory and suppressive modulation of the classical receptive field by the nonclassical receptive field and do not depend critically on the spatiotemporal structure of the stimuli. During natural vision, the classical and nonclassical receptive fields function together to form a sparse representation of the visual world. This sparse code may be computationally efficient for both early vision and higher visual processing.
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            Towards passive brain-computer interfaces: applying brain-computer interface technology to human-machine systems in general.

            Cognitive monitoring is an approach utilizing realtime brain signal decoding (RBSD) for gaining information on the ongoing cognitive user state. In recent decades this approach has brought valuable insight into the cognition of an interacting human. Automated RBSD can be used to set up a brain-computer interface (BCI) providing a novel input modality for technical systems solely based on brain activity. In BCIs the user usually sends voluntary and directed commands to control the connected computer system or to communicate through it. In this paper we propose an extension of this approach by fusing BCI technology with cognitive monitoring, providing valuable information about the users' intentions, situational interpretations and emotional states to the technical system. We call this approach passive BCI. In the following we give an overview of studies which utilize passive BCI, as well as other novel types of applications resulting from BCI technology. We especially focus on applications for healthy users, and the specific requirements and demands of this user group. Since the presented approach of combining cognitive monitoring with BCI technology is very similar to the concept of BCIs itself we propose a unifying categorization of BCI-based applications, including the novel approach of passive BCI.
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              Cortical activity during motor execution, motor imagery, and imagery-based online feedback.

              Imagery of motor movement plays an important role in learning of complex motor skills, from learning to serve in tennis to perfecting a pirouette in ballet. What and where are the neural substrates that underlie motor imagery-based learning? We measured electrocorticographic cortical surface potentials in eight human subjects during overt action and kinesthetic imagery of the same movement, focusing on power in "high frequency" (76-100 Hz) and "low frequency" (8-32 Hz) ranges. We quantitatively establish that the spatial distribution of local neuronal population activity during motor imagery mimics the spatial distribution of activity during actual motor movement. By comparing responses to electrocortical stimulation with imagery-induced cortical surface activity, we demonstrate the role of primary motor areas in movement imagery. The magnitude of imagery-induced cortical activity change was approximately 25% of that associated with actual movement. However, when subjects learned to use this imagery to control a computer cursor in a simple feedback task, the imagery-induced activity change was significantly augmented, even exceeding that of overt movement.
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                Author and article information

                Contributors
                Journal
                Front Hum Neurosci
                Front Hum Neurosci
                Front. Hum. Neurosci.
                Frontiers in Human Neuroscience
                Frontiers Media S.A.
                1662-5161
                21 April 2016
                2016
                : 10
                : 165
                Affiliations
                [1] 1Department of Computer Science and Engineering, University of Washington Seattle, WA, USA
                [2] 2Institute for Neuroengineering, University of Washington Seattle, WA, USA
                [3] 3eScience Institute, University of Washington Seattle, WA, USA
                [4] 4Center for Sensorimotor Neural Engineering, University of Washington Seattle, WA, USA
                [5] 5Department of Rehabilitation Medicine, University of Washington Seattle, WA, USA
                [6] 6Department of Neurological Surgery, University of Washington Seattle, WA, USA
                [7] 7Department of Biology, University of Washington Seattle, WA, USA
                Author notes

                Edited by: Tetsuo Kida, National Institute for Physiological Sciences, Japan

                Reviewed by: Iain DeWitt, National Institute of Deafness and Communication Disorders, USA; Gordon Berman, Emory University, USA

                *Correspondence: Nancy X. R. Wang wangnxr@ 123456uw.edu
                Article
                10.3389/fnhum.2016.00165
                4838634
                27148018
                bec94d40-1919-4d8c-b2cc-201bcdaaa848
                Copyright © 2016 Wang, Olson, Ojemann, Rao and Brunton.

                This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

                History
                : 19 December 2015
                : 01 April 2016
                Page count
                Figures: 8, Tables: 1, Equations: 0, References: 66, Pages: 13, Words: 9034
                Funding
                Funded by: National Science Foundation 10.13039/100000001
                Award ID: EEC-1028725
                Funded by: National Institutes of Health 10.13039/100000002
                Award ID: NS065186
                Award ID: 2K12HD001097-16
                Award ID: 5U10NS086525-03
                Funded by: Washington Research Foundation 10.13039/100001906
                Categories
                Neuroscience
                Original Research

                Neurosciences
                unsupervised machine learning,neural decoding,long-term recording,electrocorticography (ecog),computer vision,speech processing,functional brain mapping,automation

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