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      Mutations in COA7 cause spinocerebellar ataxia with axonal neuropathy

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          Abstract

          Higuchi et al. identify recessive mutations in the mitochondrial gene, cytochrome c oxidase assembly factor 7 ( COA7) in four unrelated patients with an axonal-type motor and sensory neuropathy with ataxia. Genetic, histopathological, radiological and functional data support a causative role for loss-of-function COA7 mutations in the observed phenotype.

          Abstract

          Several genes related to mitochondrial functions have been identified as causative genes of neuropathy or ataxia. Cytochrome c oxidase assembly factor 7 (COA7) may have a role in assembling mitochondrial respiratory chain complexes that function in oxidative phosphorylation. Here we identified four unrelated patients with recessive mutations in COA7 among a Japanese case series of 1396 patients with Charcot-Marie-Tooth disease (CMT) or other inherited peripheral neuropathies, including complex forms of CMT. We also found that all four patients had characteristic neurological features of peripheral neuropathy and ataxia with cerebellar atrophy, and some patients showed leukoencephalopathy or spinal cord atrophy on MRI scans. Validated mutations were located at highly conserved residues among different species and segregated with the disease in each family. Nerve conduction studies showed axonal sensorimotor neuropathy. Sural nerve biopsies showed chronic axonal degeneration with a marked loss of large and medium myelinated fibres. An immunohistochemical assay with an anti-COA7 antibody in the sural nerve from the control patient showed the positive expression of COA7 in the cytoplasm of Schwann cells. We also observed mildly elevated serum creatine kinase levels in all patients and the presence of a few ragged-red fibres and some cytochrome c oxidase-negative fibres in a muscle biopsy obtained from one patient, which was suggestive of subclinical mitochondrial myopathy. Mitochondrial respiratory chain enzyme assay in skin fibroblasts from the three patients showed a definitive decrease in complex I or complex IV. Immunocytochemical analysis of subcellular localization in HeLa cells indicated that mutant COA7 proteins as well as wild-type COA7 were localized in mitochondria, which suggests that mutant COA7 does not affect the mitochondrial recruitment and may affect the stability or localization of COA7 interaction partners in the mitochondria. In addition, Drosophila COA7 ( dCOA7) knockdown models showed rough eye phenotype, reduced lifespan, impaired locomotive ability and shortened synaptic branches of motor neurons. Our results suggest that loss-of-function COA7 mutation is responsible for the phenotype of the presented patients, and this new entity of disease would be referred to as spinocerebellar ataxia with axonal neuropathy type 3.

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          Most cited references31

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          Retrovirus-mediated gene transfer and expression cloning: powerful tools in functional genomics.

          Most of the human genome has now been sequenced and about 30,000 potential open reading frames have been identified, indicating that we use these 30,000 genes to functionally organize our biologic activities. However, functions of many genes are still unknown despite intensive efforts using bioinformatics as well as transgenic and knockout mice. Retrovirus-mediated gene transfer is a powerful tool that can be used to understand gene functions. We have developed a variety of retrovirus vectors and efficient packaging cell lines that have facilitated the development of efficient functional expression cloning methods. In this review, we describe retrovirus-mediated strategies used for investigation of gene functions and function-based screening strategies.
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            Mutation of TDP1, encoding a topoisomerase I-dependent DNA damage repair enzyme, in spinocerebellar ataxia with axonal neuropathy.

            Tyrosyl-DNA phosphodiesterase 1 (TDP1) repairs covalently bound topoisomerase I-DNA complexes and is essential for preventing the formation of double-strand breaks that result when stalled topoisomerase I complexes interfere with DNA replication in yeast. Here we show that a deficiency of this DNA repair pathway in humans does not predispose to neoplasia or dysfunctions in rapidly replicating tissues, but instead causes spinocerebellar ataxia with axonal neuropathy (SCAN1) by affecting large, terminally differentiated, non-dividing neuronal cells. Using genome-wide linkage mapping and a positional candidate approach in a Saudi Arabian family affected with autosomal recessive SCAN1, we identified a homozygous mutation in TDP1 (A1478G) that results in the substitution of histidine 493 with an arginine residue. The His493 residue is conserved in TDP1 across species and is located in the active site of the enzyme. Protein modeling predicts that mutation of this amino acid to arginine will disrupt the symmetric structure of the active site. We propose that loss-of-function mutations in TDP1 may cause SCAN1 either by interfering with DNA transcription or by inducing apoptosis in postmitotic neurons.
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              Senataxin, the ortholog of a yeast RNA helicase, is mutant in ataxia-ocular apraxia 2.

              Ataxia-ocular apraxia 2 (AOA2) was recently identified as a new autosomal recessive ataxia. We have now identified causative mutations in 15 families, which allows us to clinically define this entity by onset between 10 and 22 years, cerebellar atrophy, axonal sensorimotor neuropathy, oculomotor apraxia and elevated alpha-fetoprotein (AFP). Ten of the fifteen mutations cause premature termination of a large DEAxQ-box helicase, the human ortholog of yeast Sen1p, involved in RNA maturation and termination.
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                Author and article information

                Journal
                Brain
                Brain
                brainj
                Brain
                Oxford University Press
                0006-8950
                1460-2156
                June 2018
                27 April 2018
                27 April 2018
                : 141
                : 6
                : 1622-1636
                Affiliations
                [1 ]Department of Neurology and Geriatrics, Kagoshima University Graduate School of Medical and Dental Sciences, Kagoshima, Japan
                [2 ]Department of Applied Biology and The Center for Advanced Insect Research, Kyoto Institute of Technology, Japan
                [3 ]Laboratory of Cellular Regulation, Faculty of Human Sciences, Waseda University, Mikajima, Tokorozawa, Saitama 359-1192, Japan
                [4 ]Laboratory of Molecular Traffic, Institute for Molecular and Cellular Regulation, Gunma University, Gunma, Japan
                [5 ]Department of Metabolism, Chiba Children’s Hospital, Chiba, Japan
                [6 ]Department of Pediatrics, Faculty of Medicine, Saitama Medical University, Saitama, Japan
                [7 ]Center for Intractable Diseases, Saitama Medical University Hospital, Saitama, Japan
                [8 ]Department of Cardiovascular medicine, Nephrology and Neurology, Graduate School of Medicine, University of the Ryukyus, Okinawa, Japan
                [9 ]Division of Neurology/Molecular Brain Science, Kobe University Graduate School of Medicine, Kobe, Japan
                [10 ]Department of Neurology, Graduate School of Medicine, The University of Tokyo, Tokyo, Japan
                [11 ]Department of Neurology, Kanagawa Children’s Medical Center, Japan
                [12 ]Department of Pediatrics, Hiratsuka City Hospital, Hiratsuka City, Kanagawa, Japan
                [13 ]Department of Neurology, Hiratsuka City Hospital, Hiratsuka City, Kanagawa, Japan
                [14 ]Department of Neurology, Brain Center, Sapporo City General Hospital, Sapporo, Hokkaido, Japan
                [15 ]Department of Computational Biology and Medical Sciences, Graduate School of Frontier Sciences, The University of Tokyo, Chiba, Japan
                [16 ]Director of North Medical Center, Kyoto Prefectural University of Medicine, Kyoto, Japan
                Author notes
                Correspondence to: Dr Hiroshi Takashima Department of Neurology and Geriatrics, Kagoshima University Graduate School of Medical and Dental Sciences, 8-35-1 Sakuragaoka, Kagoshima City, Kagoshima, Japan 890-8520 E-mail: thiroshi@ 123456m3.kufm.kagoshima-u.ac.jp
                Article
                awy104
                10.1093/brain/awy104
                5972596
                29718187
                bc2706c5-d097-4ed1-b4a0-1dd52e562136
                © The Author(s) (2018). Published by Oxford University Press on behalf of the Guarantors of Brain.

                This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License ( http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com

                History
                : 31 August 2017
                : 29 January 2018
                : 20 February 2018
                Page count
                Pages: 15
                Funding
                Funded by: Japan Agency for Medical Research and Development 10.13039/100009619
                Award ID: JSPS KAKENHI
                Award ID: 26461275, 22129001 and 22129002
                Categories
                Original Articles

                Neurosciences
                genetics,neuropathy,spinocerebellar ataxia,whole-exome sequencing,coa7
                Neurosciences
                genetics, neuropathy, spinocerebellar ataxia, whole-exome sequencing, coa7

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