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      Modelling carbon sources and sinks in terrestrial vegetation

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          Abstract

          Contents Summary 652 I. Introduction 652 II. Discrepancy in predicting the effects of rising [CO2 ] on the terrestrial C sink 655 III. Carbon and nutrient storage in plants and its modelling 656 IV. Modelling the source and the sink: a plant perspective 657 V. Plant-scale water and Carbon flux models 660 VI. Challenges for the future 662 Acknowledgements 663 Authors contributions 663 References 663 SUMMARY: The increase in atmospheric CO2 in the future is one of the most certain projections in environmental sciences. Understanding whether vegetation carbon assimilation, growth, and changes in vegetation carbon stocks are affected by higher atmospheric CO2 and translating this understanding in mechanistic vegetation models is of utmost importance. This is highlighted by inconsistencies between global-scale studies that attribute terrestrial carbon sinks to CO2 stimulation of gross and net primary production on the one hand, and forest inventories, tree-scale studies, and plant physiological evidence showing a much less pronounced CO2 fertilization effect on the other hand. Here, we review how plant carbon sources and sinks are currently described in terrestrial biosphere models. We highlight an uneven representation of complexity between the modelling of photosynthesis and other processes, such as plant respiration, direct carbon sinks, and carbon allocation, largely driven by available observations. Despite a general lack of data on carbon sink dynamics to drive model improvements, ways forward toward a mechanistic representation of plant carbon sinks are discussed, leveraging on results obtained from plant-scale models and on observations geared toward model developments.

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          A biochemical model of photosynthetic CO2 assimilation in leaves of C 3 species.

          Various aspects of the biochemistry of photosynthetic carbon assimilation in C3 plants are integrated into a form compatible with studies of gas exchange in leaves. These aspects include the kinetic properties of ribulose bisphosphate carboxylase-oxygenase; the requirements of the photosynthetic carbon reduction and photorespiratory carbon oxidation cycles for reduced pyridine nucleotides; the dependence of electron transport on photon flux and the presence of a temperature dependent upper limit to electron transport. The measurements of gas exchange with which the model outputs may be compared include those of the temperature and partial pressure of CO2(p(CO2)) dependencies of quantum yield, the variation of compensation point with temperature and partial pressure of O2(p(O2)), the dependence of net CO2 assimilation rate on p(CO2) and irradiance, and the influence of p(CO2) and irradiance on the temperature dependence of assimilation rate.
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            On the separation of net ecosystem exchange into assimilation and ecosystem respiration: review and improved algorithm

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              A dynamic global vegetation model for studies of the coupled atmosphere-biosphere system

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                Author and article information

                Journal
                New Phytologist
                New Phytol
                Wiley
                0028646X
                October 19 2018
                Affiliations
                [1 ]Institute of Environmental Engineering; ETH Zurich; Stefano Franscini Platz 5 8093 Zurich Switzerland
                [2 ]Département de géographie and Centre d’études nordiques; Université de Montréal; Montreal QC H2V 2B8 Canada
                [3 ]Institute for Atmospheric and Climate Science; ETH Zurich; Universitätstrasse 16 8092 Zurich Switzerland
                [4 ]Institute for Applied Ecology New Zealand; School of Science; Auckland University of Technology; Wakefield Street 46 1142 Auckland New Zealand
                Article
                10.1111/nph.15451
                30339280
                baf264f9-eaa2-4360-8d90-5319372c0075
                © 2018

                http://doi.wiley.com/10.1002/tdm_license_1.1

                http://onlinelibrary.wiley.com/termsAndConditions#vor

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