8
views
0
recommends
+1 Recommend
1 collections
    0
    shares
      • Record: found
      • Abstract: found
      • Article: found
      Is Open Access

      Storage protein composition during germination and its association with physiological seed quality in common bean

      research-article

      Read this article at

      Bookmark
          There is no author summary for this article yet. Authors can add summaries to their articles on ScienceOpen to make them more accessible to a non-specialist audience.

          Abstract

          ABSTRACT. Seed reserve mobilization is considered a post-germination process; however, seed storage protein mobilization occurs during germination. Thus, the knowledge of seed protein composition is important to understand various processes during germination, and it be associated with seed vigor. Therefore, this study aimed to characterize landrace genotypes of common bean (Phaseolus vulgaris) through fractionation of seed storage proteins during germination and to verify the association between seed protein composition and seed vigor. Genotypes of the highest (55 and 81) and lowest (23 and 50) physiological quality were selected. Protein content analysis, profiling, and characterization were performed by combining different hydration times. Mass spectrometry involving in-gel digestion and MALDI-ToF analysis was employed for the qualitative identification of proteins. Glutelin extraction detected the enzyme lipoxygenase in genotypes 55 and 81 alone. In plants, this enzyme may be involved in diverse physiological processes, including growth and development, pest resistance, senescence, and response to wounding. In the process of germination, lipoxygenase removes reactive oxygen species during reserve mobilization; therefore, lipoxygenase may be a candidate biochemical marker for high-vigor genotypes.

          Related collections

          Most cited references26

          • Record: found
          • Abstract: not found
          • Article: not found

          A Rapid and Sensitive Method for the Quantitation of Microgram Quantities of Protein Utilizing the Principle of Protein-Dye Binding

            Bookmark
            • Record: found
            • Abstract: found
            • Article: found
            Is Open Access

            UniProt: the universal protein knowledgebase

            (2016)
            The UniProt knowledgebase is a large resource of protein sequences and associated detailed annotation. The database contains over 60 million sequences, of which over half a million sequences have been curated by experts who critically review experimental and predicted data for each protein. The remainder are automatically annotated based on rule systems that rely on the expert curated knowledge. Since our last update in 2014, we have more than doubled the number of reference proteomes to 5631, giving a greater coverage of taxonomic diversity. We implemented a pipeline to remove redundant highly similar proteomes that were causing excessive redundancy in UniProt. The initial run of this pipeline reduced the number of sequences in UniProt by 47 million. For our users interested in the accessory proteomes, we have made available sets of pan proteome sequences that cover the diversity of sequences for each species that is found in its strains and sub-strains. To help interpretation of genomic variants, we provide tracks of detailed protein information for the major genome browsers. We provide a SPARQL endpoint that allows complex queries of the more than 22 billion triples of data in UniProt (http://sparql.uniprot.org/). UniProt resources can be accessed via the website at http://www.uniprot.org/.
              Bookmark
              • Record: found
              • Abstract: not found
              • Article: not found

              Past: Paleontological Statistics softwafre package for education and data analysis

                Bookmark

                Author and article information

                Journal
                asagr
                Acta Scientiarum. Agronomy
                Acta Sci., Agron.
                Editora da Universidade Estadual de Maringá - EDUEM (Maringá, PR, Brazil )
                1679-9275
                1807-8621
                2022
                : 44
                : e53434
                Affiliations
                [1] Lages Santa Catarina orgnameUniversidade do Estado de Santa Catarina orgdiv1Departamento de Agronomia orgdiv2Programa de Pós-Graduação em Produção Vegetal Brazil
                Article
                S1807-86212022000105009 S1807-8621(22)04400005009
                10.4025/actasciagron.v44i1.53434
                b9f7c0f0-2333-4d71-99f1-5e89f623d4c8

                This work is licensed under a Creative Commons Attribution 4.0 International License.

                History
                : 22 July 2020
                : 29 April 2020
                Page count
                Figures: 0, Tables: 0, Equations: 0, References: 27, Pages: 0
                Product

                SciELO Brazil

                Categories
                Crop Production

                mass spectrometry,1D SDS-PAGE,glutelin,lipoxygenase,Phaseolus vulgaris

                Comments

                Comment on this article