The formation of the charge density wave (CDW) in two-dimensional (2D) materials caused by Peierls instability remains controversial. The role played by Fermi surface nesting in giving the CDW state in the 2H-NbSe2 material has been debated and is to be investigated here. Four NbSe2 structures, Normal, Stripe, Filled, and Hollow ones, have been identified based on the characteristics in scanning tunneling microscope images and first-principles simulations. The calculations reveal that the Filled phase follows Peierls's description in exhibiting fully opened gaps at the CDW Brillouin zone boundary, resulting in a drop at the Fermi level in the density of states (DOS) and the scanning tunneling spectroscopy spectra. The electronic susceptibility and phonon instability in the Normal phase further support that the Fermi surface nesting is triggered by two nesting vectors, whereas solely one vector leads to the Stripe phase. This comprehensive study demonstrates that the Filled phase of NbSe2 can be categorized into the Peierls-instability-induced CDW in 2D systems.