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      Application of Convolutional Neural Networks in the Diagnosis of Helicobacter pylori Infection Based on Endoscopic Images

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          Abstract

          Background and aims

          The role of artificial intelligence in the diagnosis of Helicobacter pylori gastritis based on endoscopic images has not been evaluated. We constructed a convolutional neural network (CNN), and evaluated its ability to diagnose H. pylori infection.

          Methods

          A 22-layer, deep CNN was pre-trained and fine-tuned on a dataset of 32,208 images either positive or negative for H. pylori (first CNN). Another CNN was trained using images classified according to 8 anatomical locations (secondary CNN). A separate test data set (11,481 images from 397 patients) was evaluated by the CNN, and 23 endoscopists, independently.

          Results

          The sensitivity, specificity, accuracy, and diagnostic time were 81.9%, 83.4%, 83.1%, and 198 s, respectively, for the first CNN, and 88.9%, 87.4%, 87.7%, and 194 s, respectively, for the secondary CNN. These values for the 23 endoscopists were 79.0%, 83.2%, 82.4%, and 230 ± 65 min (85.2%, 89.3%, 88.6%, and 253 ± 92 min by 6 board-certified endoscopists), respectively. The secondary CNN had a significantly higher accuracy than endoscopists (by 5.3%; 95% CI, 0.3–10.2).

          Conclusion

          H. pylori gastritis could be diagnosed based on endoscopic images using CNN with higher accuracy and in a considerably shorter time compared to manual diagnosis by endoscopists.

          Highlights

          • We compared the diagnostic ability for H. pylori gastritis between a convolutional neural network (CNN) and endoscopists.

          • Diagnostic ability of CNN was greater than that of endoscopists in general and similar to that of experienced endoscopists.

          • The diagnostic time of CNN was considerably shorter than that of manual diagnosis by endoscopists.

          In Japan, H. pylori infection is common, and its detection during endoscopic examination is desirable. However, a diagnosis based on endoscopic findings requires training, and its accuracy depends on the endoscopist's skill. We showed that the diagnostic ability of a convolutional neural network (CNN) for H. pylori infection was comparable to that of experienced endoscopists, and the time required for the diagnosis was considerably shorter. Thus, the use of CNNs for diagnosis of H. pylori infection will reduce endoscopists' workload. Moreover, the procedure can be performed completely “online,” thereby addressing the problem of inadequate number of physicians in remote locations.

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          Most cited references15

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          Effect of eradication of Helicobacter pylori on incidence of metachronous gastric carcinoma after endoscopic resection of early gastric cancer: an open-label, randomised controlled trial.

          The relation between Helicobacter pylori infection and gastric cancer has been proven in epidemiological studies and animal experiments. Our aim was to investigate the prophylactic effect of H pylori eradication on the development of metachronous gastric carcinoma after endoscopic resection for early gastric cancer. In this multi-centre, open-label, randomised controlled trial, 544 patients with early gastric cancer, either newly diagnosed and planning to have endoscopic treatment or in post-resection follow-up after endoscopic treatment, were randomly assigned to receive an H pylori eradication regimen (n=272) or control (n=272). Randomisation was done by a computer-generated randomisation list and was stratified by whether the patient was newly diagnosed or post-resection. Patients in the eradication group received lansoprazole 30 mg twice daily, amoxicillin 750 mg twice daily, and clarithromycin 200 mg twice daily for a week; those in the control group received standard care, but no treatment for H pylori. Patients were examined endoscopically at 6, 12, 24, and 36 months after allocation. The primary endpoint was diagnosis of new carcinoma at another site in the stomach. Analyses were by intention to treat. This trial is registered with the UMIN Clinical Trials Registry, number UMIN000001169. At 3-year follow-up, metachronous gastric carcinoma had developed in nine patients in the eradication group and 24 in the control group. In the full intention-to-treat population, including all patients irrespective of length of follow-up (272 patients in each group), the odds ratio for metachronous gastric carcinoma was 0.353 (95% CI 0.161-0.775; p=0.009); in the modified intention-to-treat population, including patients with at least one post-randomisation assessment of tumour status and adjusting for loss to follow-up (255 patients in the eradication group, 250 in the control group), the hazard ratio for metachronous gastric carcinoma was 0.339 (95% CI 0.157-0.729; p=0.003). In the eradication group, 19 (7%) patients had diarrhoea and 32 (12%) had soft stools. Prophylactic eradication of H pylori after endoscopic resection of early gastric cancer should be used to prevent the development of metachronous gastric carcinoma. Hiroshima Cancer Seminar Foundation.
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            Carcinogenesis of Helicobacter pylori.

            Helicobacter infection is the leading cause of gastric cancer worldwide. Infection with this ubiquitous bacterium incites a chronic active immune response that persists for the life of the host, in the absence of antibiotic-induced eradication. It is the combination of bacterial factors, environmental insults, and the host immune response that drives the initiation and progression of mucosal atrophy, metaplasia, and dysplasia toward gastric cancer. Although it may seem intuitively obvious that removing the offending organism would negate the cancer risk, this approach is neither feasible (half of the world harbors this infection) nor is it straightforward. Most patients are infected in childhood, and present with various degrees of mucosal damage before any therapy. This review outlines the histologic progression of human Helicobacter infection from the early stages of inflammation through the development of metaplasia, dysplasia, and, finally, cancer. The effects of dietary and bacterial eradication therapy on disease progression and lesion reversibility are reviewed within the context of population studies and compared between study designs and populations tested. Eradication studies in the mouse model of infection prevents the formation of gastric cancer, and allows regression of established lesions, providing a useful model to study interaction between bacterium, environment, and host, without the difficulties inherent in human population studies. Recent advances in identifying the bone marrow-derived stem cell as the cell of origin of Helicobacter-induced gastric cancer in the murine model are discussed and interpreted in the context of human disease, and implications for future treatment are discussed.
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              • Article: not found

              Big Data and machine learning in radiation oncology: State of the art and future prospects

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                Author and article information

                Contributors
                Journal
                EBioMedicine
                EBioMedicine
                EBioMedicine
                Elsevier
                2352-3964
                16 October 2017
                November 2017
                16 October 2017
                : 25
                : 106-111
                Affiliations
                [a ]Tada Tomohiro Institute of Gastroenterology and Proctology, Japan
                [b ]Department of Gastrointestinal Oncology, Osaka International Cancer Institute, Japan
                [c ]Department of Global Health Policy, Graduate School of Medicine, The University of Tokyo, Japan
                [d ]Department of Epidemiology and Biostatistics, School of Public Health, Imperial College London, UK
                [e ]Idee, Inc., Japan
                [f ]Department of Health Informatics, Kyoto University School of Public Health, Japan
                [g ]Teikyo University of Graduate School of Public Health, Japan
                [h ]Department of Surgical Oncology, Graduate School of Medicine, The University of Tokyo, Japan
                [i ]Medical Governance Research Institute, Japan
                [j ]Jyoban Hospital of Tokiwa Foundation, Japan
                [k ]Surgery Department, Sanno Hospital, International University of Health and Welfare, Japan
                [l ]Department of Gastroenterology, Tokatsu-Tsujinaka Hospital, Japan
                Author notes
                [* ]Corresponding author at: Department of Gastrointestinal Oncology, Osaka International Cancer Institute, 3-1-69, Otemae, Chuo-ku, Osaka 541-8567, Japan.Department of Gastrointestinal OncologyOsaka International Cancer Institute3-1-69, OtemaeChuo-kuOsaka541-8567Japan shichijiyou-tky@ 123456umin.ac.jp
                Article
                S2352-3964(17)30412-7
                10.1016/j.ebiom.2017.10.014
                5704071
                29056541
                b82bd429-92c2-47d8-8ad8-4cb60e5e0f0b
                © 2017 The Authors

                This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

                History
                : 11 September 2017
                : 4 October 2017
                : 12 October 2017
                Categories
                Research Paper

                helicobacter pylori,endoscopy,artificial intelligence,convolutional neural networks

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