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      Epigenetic Diversity and the Evolutionary Potential of Wild Populations

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          ABSTRACT

          Fast‐paced selective pressures imposed by climate change and anthropogenic activities call for adaptive evolutionary responses to emerge at ecological timescales. However, the evolution and heritability of genomic variation underlie mechanistic constraints, which dictate a slower pace of adaptation exclusively relying on standing genetic variation and novel mutations. Environmentally responsive epigenetic mechanisms can allow acclimatisation and adaptive phenotypes to arise faster than DNA sequence‐based mechanisms alone. Nevertheless, the knowledge gap between identifying epigenetic marks and effectively deeming them functional is still wide in a natural context and often outside the scope of model organisms. With this Special Issue, we aimed to narrow this gap by presenting a compilation of original research articles, reviews and opinions on the topic of epigenetics in wild populations. We contextualised this collection within the overarching topic of conservation biology, as we firmly propose that epigenetic research can significantly enhance the effectiveness of conservation measures. Contributions highlighted the putative role of epigenetic variation in the acclimatisation and adaptive potential of species and populations directly and indirectly affected by climatic shifts and anthropogenic actions. They further exemplified how epigenetic variation can be used as biomarkers for monitoring variations in physiology, phenology and behaviour. Lastly, reviews and perspective articles illustrated the past and present of epigenetic research in wild populations while suggesting future research avenues.

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          Most cited references30

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          Rate, spectrum, and evolutionary dynamics of spontaneous epimutations.

          Stochastic changes in cytosine methylation are a source of heritable epigenetic and phenotypic diversity in plants. Using the model plant Arabidopsis thaliana, we derive robust estimates of the rate at which methylation is spontaneously gained (forward epimutation) or lost (backward epimutation) at individual cytosines and construct a comprehensive picture of the epimutation landscape in this species. We demonstrate that the dynamic interplay between forward and backward epimutations is modulated by genomic context and show that subtle contextual differences have profoundly shaped patterns of methylation diversity in A. thaliana natural populations over evolutionary timescales. Theoretical arguments indicate that the epimutation rates reported here are high enough to rapidly uncouple genetic from epigenetic variation, but low enough for new epialleles to sustain long-term selection responses. Our results provide new insights into methylome evolution and its population-level consequences.
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            Global change biology: A primer

            Rowan Sage (2019)
            Because of human action, the Earth has entered an era where profound changes in the global environment are creating novel conditions that will be discernable far into the future. One consequence may be a large reduction of the Earth's biodiversity, potentially representing a sixth mass extinction. With effective stewardship, the global change drivers that threaten the Earth's biota could be alleviated, but this requires clear understanding of the drivers, their interactions, and how they impact ecological communities. This review identifies 10 anthropogenic global change drivers and discusses how six of the drivers (atmospheric CO2 enrichment, climate change, land transformation, species exploitation, exotic species invasions, eutrophication) impact Earth's biodiversity. Driver impacts on a particular species could be positive or negative. In either case, they initiate secondary responses that cascade along ecological lines of connection and in doing so magnify the initial impact. The unique nature of the threat to the Earth's biodiversity is not simply due to the magnitude of each driver, but due to the speed of change, the novelty of the drivers, and their interactions. Emphasizing one driver, notably climate change, is problematic because the other global change drivers also degrade biodiversity and together threaten the stability of the biosphere. As the main academic journal addressing global change effects on living systems, GCB is well positioned to provide leadership in solving the global change challenge. If humanity cannot meet the challenge, then GCB is positioned to serve as a leading chronicle of the sixth mass extinction to occur on planet Earth.
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              How genomics can help biodiversity conservation

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                Author and article information

                Contributors
                miguelalexsoares@gmail.com
                Journal
                Evol Appl
                Evol Appl
                10.1111/(ISSN)1752-4571
                EVA
                Evolutionary Applications
                John Wiley and Sons Inc. (Hoboken )
                1752-4571
                21 October 2024
                October 2024
                : 17
                : 10 ( doiID: 10.1111/eva.v17.10 )
                : e70011
                Affiliations
                [ 1 ] Department of Biology University of Turku Turku Finland
                [ 2 ] School of Biological and Behavioural Sciences Queen Mary University of London London UK
                [ 3 ] Leibniz Centre for Tropical Marine Research Bremen Germany
                [ 4 ] Smithsonian Tropical Research Institute Gamboa Panama
                Author notes
                [*] [* ] Correspondence:

                Miguel Baltazar‐Soares ( miguelalexsoares@ 123456gmail.com )

                Author information
                https://orcid.org/0000-0002-5919-6197
                https://orcid.org/0000-0002-0942-7479
                https://orcid.org/0000-0002-7507-8895
                Article
                EVA70011 EVA-2024-184-OA
                10.1111/eva.70011
                11494020
                39439434
                b721c8a6-eef3-4c20-87e7-a7d805a5d342
                © 2024 The Author(s). Evolutionary Applications published by John Wiley & Sons Ltd.

                This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.

                History
                : 13 August 2024
                : 26 August 2024
                Page count
                Figures: 0, Tables: 0, Pages: 5, Words: 3500
                Categories
                Editorial
                Editorial
                Custom metadata
                2.0
                October 2024
                Converter:WILEY_ML3GV2_TO_JATSPMC version:6.4.9 mode:remove_FC converted:22.10.2024

                Evolutionary Biology
                acclimatisation,adaptive potential,conservation biology,epigenetics,natural populations

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