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      miR-155 harnesses Phf19 to potentiate cancer immunotherapy through epigenetic reprogramming of CD8 + T cell fate

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          Abstract

          T cell senescence and exhaustion are major barriers to successful cancer immunotherapy. Here we show that miR-155 increases CD8 + T cell antitumor function by restraining T cell senescence and functional exhaustion through epigenetic silencing of drivers of terminal differentiation. miR-155 enhances Polycomb repressor complex 2 (PRC2) activity indirectly by promoting the expression of the PRC2-associated factor Phf19 through downregulation of the Akt inhibitor, Ship1. Phf19 orchestrates a transcriptional program extensively shared with miR-155 to restrain T cell senescvbence and sustain CD8 + T cell antitumor responses. These effects rely on Phf19 histone-binding capacity, which is critical for the recruitment of PRC2 to the target chromatin. These findings establish the miR-155–Phf19–PRC2 as a pivotal axis regulating CD8 + T cell differentiation, thereby paving new ways for potentiating cancer immunotherapy through epigenetic reprogramming of CD8 + T cell fate.

          Abstract

          The inability of T cells to properly mount anti-tumour immunity underlies failed cancer immune surveillance or therapy. Here the authors show that a microRNA, miR-155, suppresses Ship1 phosphatase expression to modulate epigenetic reprogramming of CD8 T cell differentiation via the Phf19/PRC2 axis, thereby implicating a novel aspect of cancer immunity regulation.

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          Most cited references27

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          Inhibiting glycolytic metabolism enhances CD8+ T cell memory and antitumor function.

          Naive CD8+ T cells rely upon oxidation of fatty acids as a primary source of energy. After antigen encounter, T cells shift to a glycolytic metabolism to sustain effector function. It is unclear, however, whether changes in glucose metabolism ultimately influence the ability of activated T cells to become long-lived memory cells. We used a fluorescent glucose analog, 2-NBDG, to quantify glucose uptake in activated CD8+ T cells. We found that cells exhibiting limited glucose incorporation had a molecular profile characteristic of memory precursor cells and an increased capacity to enter the memory pool compared with cells taking up high amounts of glucose. Accordingly, enforcing glycolytic metabolism by overexpressing the glycolytic enzyme phosphoglycerate mutase-1 severely impaired the ability of CD8+ T cells to form long-term memory. Conversely, activation of CD8+ T cells in the presence of an inhibitor of glycolysis, 2-deoxyglucose, enhanced the generation of memory cells and antitumor functionality. Our data indicate that augmenting glycolytic flux drives CD8+ T cells toward a terminally differentiated state, while its inhibition preserves the formation of long-lived memory CD8+ T cells. These results have important implications for improving the efficacy of T cell-based therapies against chronic infectious diseases and cancer.
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            Tolerance and exhaustion: defining mechanisms of T cell dysfunction.

            CD8 T cell activation and differentiation are tightly controlled, and dependent on the context in which naïve T cells encounter antigen, can either result in functional memory or T cell dysfunction, including exhaustion, tolerance, anergy, or senescence. With the identification of phenotypic and functional traits shared in different settings of T cell dysfunction, distinctions between such dysfunctional states have become blurred. Here, we discuss distinct states of CD8 T cell dysfunction, with an emphasis on: (i) T cell tolerance to self-antigens (self-tolerance); (ii) T cell exhaustion during chronic infections; and (iii) tumor-induced T cell dysfunction. We highlight recent findings on cellular and molecular characteristics defining these states, cell-intrinsic regulatory mechanisms that induce and maintain them, and strategies that can lead to their reversal. Copyright © 2013 Elsevier Ltd. All rights reserved.
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              Cancer mediates effector T cell dysfunction by targeting microRNAs and EZH2 via glycolysis restriction

              Aerobic glycolysis regulates T cell function. However, if and how primary cancer alters T cell glycolytic metabolism and affects tumor immunity remains a question in cancer patients. Here we report that ovarian cancers imposed glucose restriction on T cells and dampened their function via maintaining high expression of microRNA101 and microRNA26a, which constrained expression of the methyltransferase EZH2. EZH2 activated the Notch pathway by suppressing Notch repressors, Numb and Fbxw7, via H3K27me3, and consequently stimulated T cell polyfunctional cytokine expression and promoted their survival via Bcl-2 signaling. Moreover, human shRNA-knockdown-EZH2-deficient T cells elicited poor anti-tumor immunity. EZH2+CD8+ T cells were associated with improved cancer patient survival. Together, the data unveil a novel metabolic target and mechanism of cancer immune evasion.
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                Author and article information

                Contributors
                yji365@gmail.com
                gattinol@mail.nih.gov
                Journal
                Nat Commun
                Nat Commun
                Nature Communications
                Nature Publishing Group UK (London )
                2041-1723
                14 May 2019
                14 May 2019
                2019
                : 10
                : 2157
                Affiliations
                [1 ]ISNI 0000 0001 2297 5165, GRID grid.94365.3d, Experimental Transplantation and Immunology Branch, Center for Cancer Research, National Cancer Institute, , National Institutes of Health, ; Bethesda, MD 20892 USA
                [2 ]Department of Bioinformatics, Inova Translational Medicine Institute, Fairfax, VA 22031 USA
                [3 ]ISNI 0000 0001 2297 5165, GRID grid.94365.3d, Laboratory of Muscle Stem Cells and Gene Regulation, National Institute of Arthritis, Musculoskeletal and Skin Diseases, , National Institutes of Health, ; Bethesda, MD 20892 USA
                [4 ]ISNI 0000 0001 2297 5165, GRID grid.94365.3d, National Human Genome Research Institute, , National Institutes of Health, ; Bethesda, MD 20892 USA
                [5 ]ISNI 0000 0001 2297 5165, GRID grid.94365.3d, Laboratory of Immunology, National Institute of Allergy and Infectious Diseases, , National Institutes of Health, ; Bethesda, MD 20892 USA
                [6 ]ISNI 0000 0001 2248 3398, GRID grid.264727.2, Fels Institute for Cancer Research and Molecular Biology, , Temple University, ; Philadelphia, PA 19140 USA
                [7 ]GRID grid.473715.3, Centre for Genomic Regulation (CRG), , The Barcelona Institute of Science and Technology, ; Dr. Aiguader 88, 08003 Barcelona, Spain
                [8 ]ISNI 0000 0001 2172 2676, GRID grid.5612.0, Universitat Pompeu Fabra (UPF), ; Barcelona, 08003 Spain
                [9 ]ISNI 0000 0000 9601 989X, GRID grid.425902.8, ICREA, ; Pg. Lluis Companys 23, 08010 Barcelona, Spain
                [10 ]GRID grid.485053.f, Present Address: Cellular Biomedicine Group (CBMG), ; Gaithersburg, MD 20877 USA
                Author information
                http://orcid.org/0000-0001-6340-7009
                http://orcid.org/0000-0001-6263-4306
                http://orcid.org/0000-0002-3633-5924
                http://orcid.org/0000-0002-1306-2820
                http://orcid.org/0000-0003-3488-6228
                http://orcid.org/0000-0003-2239-3282
                Article
                9882
                10.1038/s41467-019-09882-8
                6517388
                31089138
                b4de8c18-53c2-4d4d-bbf3-a22b42d3e4ff
                © This is a U.S. government work and not under copyright protection in the U.S.; foreign copyright protection may apply 2019

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 29 May 2018
                : 2 April 2019
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                © The Author(s) 2019

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                epigenetics in immune cells,mirna in immune cells,immunotherapy,cd8-positive t cells

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