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      Susceptibility of White-Tailed Deer (Odocoileus virginianus) to SARS-CoV-2

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          Abstract

          Given the presumed zoonotic origin of SARS-CoV-2, the human-animal-environment interface of the COVID-19 pandemic is an area of great scientific and public and animal health interest. Identification of animal species that are susceptible to infection by SARS-CoV-2 may help to elucidate the potential origin of the virus, identify potential reservoirs or intermediate hosts, and define the mechanisms underlying cross-species transmission to humans.

          ABSTRACT

          The origin of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the virus causing the global coronavirus disease 2019 (COVID-19) pandemic, remains a mystery. Current evidence suggests a likely spillover into humans from an animal reservoir. Understanding the host range and identifying animal species that are susceptible to SARS-CoV-2 infection may help to elucidate the origin of the virus and the mechanisms underlying cross-species transmission to humans. Here, we demonstrated that white-tailed deer ( Odocoileus virginianus), an animal species in which the angiotensin-converting enzyme 2 (ACE2)—the SARS-CoV-2 receptor—shares a high degree of similarity to that of humans, are highly susceptible to infection. Intranasal inoculation of deer fawns with SARS-CoV-2 resulted in established subclinical viral infection and shedding of infectious virus in nasal secretions. Notably, infected animals transmitted the virus to noninoculated contact deer. Viral RNA was detected in multiple tissues 21 days postinoculation (p.i.). All inoculated and indirect contact animals seroconverted and developed neutralizing antibodies as early as day 7 p.i. The work provides important insights into the animal host range of SARS-CoV-2 and identifies white-tailed deer as a wild animal species susceptible to the virus.

          IMPORTANCE Given the presumed zoonotic origin of SARS-CoV-2, the human-animal-environment interface of the COVID-19 pandemic is an area of great scientific and public and animal health interest. Identification of animal species that are susceptible to infection by SARS-CoV-2 may help to elucidate the potential origin of the virus, identify potential reservoirs or intermediate hosts, and define the mechanisms underlying cross-species transmission to humans. Additionally, it may also provide information and help to prevent potential reverse zoonosis that could lead to the establishment of new wildlife hosts. Our data shows that upon intranasal inoculation, white-tailed deer became subclinically infected and shed infectious SARS-CoV-2 in nasal secretions and feces. Importantly, indirect contact animals were infected and shed infectious virus, indicating efficient SARS-CoV-2 transmission from inoculated animals. These findings support the inclusion of wild cervid species in investigations conducted to assess potential reservoirs or sources of SARS-CoV-2 infection.

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          Most cited references61

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          A Novel Coronavirus from Patients with Pneumonia in China, 2019

          Summary In December 2019, a cluster of patients with pneumonia of unknown cause was linked to a seafood wholesale market in Wuhan, China. A previously unknown betacoronavirus was discovered through the use of unbiased sequencing in samples from patients with pneumonia. Human airway epithelial cells were used to isolate a novel coronavirus, named 2019-nCoV, which formed a clade within the subgenus sarbecovirus, Orthocoronavirinae subfamily. Different from both MERS-CoV and SARS-CoV, 2019-nCoV is the seventh member of the family of coronaviruses that infect humans. Enhanced surveillance and further investigation are ongoing. (Funded by the National Key Research and Development Program of China and the National Major Project for Control and Prevention of Infectious Disease in China.)
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            Is Open Access

            A pneumonia outbreak associated with a new coronavirus of probable bat origin

            Since the outbreak of severe acute respiratory syndrome (SARS) 18 years ago, a large number of SARS-related coronaviruses (SARSr-CoVs) have been discovered in their natural reservoir host, bats 1–4 . Previous studies have shown that some bat SARSr-CoVs have the potential to infect humans 5–7 . Here we report the identification and characterization of a new coronavirus (2019-nCoV), which caused an epidemic of acute respiratory syndrome in humans in Wuhan, China. The epidemic, which started on 12 December 2019, had caused 2,794 laboratory-confirmed infections including 80 deaths by 26 January 2020. Full-length genome sequences were obtained from five patients at an early stage of the outbreak. The sequences are almost identical and share 79.6% sequence identity to SARS-CoV. Furthermore, we show that 2019-nCoV is 96% identical at the whole-genome level to a bat coronavirus. Pairwise protein sequence analysis of seven conserved non-structural proteins domains show that this virus belongs to the species of SARSr-CoV. In addition, 2019-nCoV virus isolated from the bronchoalveolar lavage fluid of a critically ill patient could be neutralized by sera from several patients. Notably, we confirmed that 2019-nCoV uses the same cell entry receptor—angiotensin converting enzyme II (ACE2)—as SARS-CoV.
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              Characteristics of and Important Lessons From the Coronavirus Disease 2019 (COVID-19) Outbreak in China: Summary of a Report of 72 314 Cases From the Chinese Center for Disease Control and Prevention

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                Author and article information

                Contributors
                Role: Editor
                Journal
                J Virol
                J Virol
                jvi
                jvi
                JVI
                Journal of Virology
                American Society for Microbiology (1752 N St., N.W., Washington, DC )
                0022-538X
                1098-5514
                10 March 2021
                10 May 2021
                June 2021
                10 May 2021
                : 95
                : 11
                : e00083-21
                Affiliations
                [a ]Infectious Bacterial Diseases Research Unit, National Animal Disease Center, USDA, Agricultural Research Service, Ames, Iowa, USA
                [b ]Department of Population Medicine and Diagnostic Sciences, Animal Health Diagnostic Center, College of Veterinary Medicine, Cornell University, Ithaca, New York, USA
                [c ]Ruminant Disease and Immunology Research Unit, National Animal Disease Center, USDA, Agricultural Research Service, Ames, Iowa, USA
                [d ]Virus and Prion Research Unit, National Animal Disease Center, USDA, Agricultural Research, Ames, Iowa, USA
                Loyola University Chicago
                Author notes
                Address correspondence to Mitchell V. Palmer, mitchell.palmer@ 123456usda.gov ; or Diego G. Diel, dgdiel@ 123456cornell.edu .

                Mitchell V. Palmer and Mathias Martins contributed equally to this work. Author order was determined based on the institution where the animal studies were conducted and in order of increasing seniority.

                Citation Palmer MV, Martins M, Falkenberg S, Buckley A, Caserta LC, Mitchell PK, Cassmann ED, Rollins A, Zylich NC, Renshaw RW, Guarino C, Wagner B, Lager K, Diel DG. 2021. Susceptibility of white-tailed deer ( Odocoileus virginianus) to SARS-CoV-2. J Virol 95:e00083-21. https://doi.org/10.1128/JVI.00083-21.

                Author information
                https://orcid.org/0000-0002-5902-3333
                https://orcid.org/0000-0002-8290-5756
                https://orcid.org/0000-0002-7130-2650
                https://orcid.org/0000-0003-3237-8940
                Article
                00083-21
                10.1128/JVI.00083-21
                8139686
                33692203
                b48d62d3-7c86-407f-a50e-9dbeb7c9cf72

                This is a work of the U.S. Government and is not subject to copyright protection in the United States. Foreign copyrights may apply.

                This article is made available via the PMC Open Access Subset for unrestricted noncommercial re-use and secondary analysis in any form or by any means with acknowledgement of the original source. These permissions are granted for the duration of the World Health Organization (WHO) declaration of COVID-19 as a global pandemic.

                History
                : 20 January 2021
                : 2 March 2021
                Page count
                Figures: 8, Tables: 0, Equations: 0, References: 61, Pages: 16, Words: 10576
                Funding
                Funded by: USDA | Agricultural Research Service (ARS), https://doi.org/10.13039/100007917;
                Award Recipient : Award Recipient : Award Recipient : Award Recipient : Award Recipient :
                Categories
                Pathogenesis and Immunity
                Custom metadata
                June 2021

                Microbiology & Virology
                ace2,sars-cov-2,cervids,deer,host species,pathogenesis,host range
                Microbiology & Virology
                ace2, sars-cov-2, cervids, deer, host species, pathogenesis, host range

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