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      Investigating the diversity of bioluminescent marine worm Polycirrus (Annelida), with description of three new species from the Western Pacific

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          Abstract

          Bioluminescence, a phenomenon observed widely in organisms ranging from bacteria to metazoans, has a significant impact on the behaviour and ecology of organisms. Among bioluminescent organisms, Polycirrus, which has unique emission wavelengths, has received attention, and advanced studies such as RNA-Seq have been conducted, but they are limited to a few cases. In addition, accurate species identification is difficult due to lack of taxonomic organization. In this study, we conducted comprehensive taxonomic survey of Japanese Polycirrus based on multiple specimens from different locations and described as three new species: Polycirrus onibi sp. nov., P. ikeguchii sp. nov. and P. aoandon sp. nov. The three species can be distinguished from the known species based on the following characters: (i) arrangement of mid-ventral groove, (ii) arrangement of notochaetigerous segments, (iii) type of neurochaetae uncini, and (iv) arrangement of nephridial papillae. By linking the bioluminescence phenomenon with taxonomic knowledge, we established a foundation for future bioluminescent research development. We also provide a brief phylogenetic tree based on cytochrome c oxidase subunit I (COI) sequences to discuss the evolution of bioluminescence and the direction of future research.

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          Molecular Evolutionary Genetics Analysis (MEGA) for macOS

          The Molecular Evolutionary Genetics Analysis (MEGA) software enables comparative analysis of molecular sequences in phylogenetics and evolutionary medicine. Here, we introduce the macOS version of the MEGA software. This new version eliminates the need for virtualization and emulation programs previously required to use MEGA on Apple computers. MEGA for macOS utilizes memory and computing resources efficiently for conducting evolutionary analyses on macOS. It has a native Cocoa graphical user interface that is programmed to provide a consistent user experience across macOS, Windows, and Linux. MEGA for macOS is available from www.megasoftware.net free of charge.
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            Bioluminescence in the sea.

            Bioluminescence spans all oceanic dimensions and has evolved many times--from bacteria to fish--to powerfully influence behavioral and ecosystem dynamics. New methods and technology have brought great advances in understanding of the molecular basis of bioluminescence, its physiological control, and its significance in marine communities. Novel tools derived from understanding the chemistry of natural light-producing molecules have led to countless valuable applications, culminating recently in a related Nobel Prize. Marine organisms utilize bioluminescence for vital functions ranging from defense to reproduction. To understand these interactions and the distributions of luminous organisms, new instruments and platforms allow observations on individual to oceanographic scales. This review explores recent advances, including the chemical and molecular, phylogenetic and functional, community and oceanographic aspects of bioluminescence.
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              Die Familien der Anneliden

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                Author and article information

                Contributors
                Role: ConceptualizationRole: Data curationRole: Formal analysisRole: Funding acquisitionRole: InvestigationRole: MethodologyRole: Project administrationRole: ResourcesRole: Writing – original draft
                Role: Data curationRole: InvestigationRole: MethodologyRole: ResourcesRole: VisualizationRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: ResourcesRole: VisualizationRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: ResourcesRole: VisualizationRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: ResourcesRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: InvestigationRole: ResourcesRole: VisualizationRole: Writing – review & editing
                Role: Data curationRole: Formal analysisRole: ResourcesRole: VisualizationRole: Writing – review & editing
                Role: Formal analysisRole: ResourcesRole: Writing – review & editing
                Role: Formal analysisRole: ResourcesRole: Writing – review & editing
                Role: InvestigationRole: ResourcesRole: Writing – review & editing
                Role: ConceptualizationRole: Data curationRole: Funding acquisitionRole: InvestigationRole: ResourcesRole: Writing – review & editing
                Journal
                R Soc Open Sci
                R Soc Open Sci
                RSOS
                royopensci
                Royal Society Open Science
                The Royal Society
                2054-5703
                March 29, 2023
                March 2023
                March 29, 2023
                : 10
                : 3
                : 230039
                Affiliations
                [ 1 ] Sugashima Marine Biological Laboratory, Graduate School of Science, Nagoya University, , 429-63 Sugashima, Toba, Mie 517-0004, Japan
                [ 2 ] Centre for Marine & Coastal Studies, Universiti Sains Malaysia, , 11800 USM Penang, Malaysia
                [ 3 ] Institute for Advanced Research, Nagoya University, , 464-8601 Nagoya, Japan
                [ 4 ] Graduate School of Science, Nagoya University, , 464-8601 Nagoya, Japan
                [ 5 ] Japan Underwater Films Co., Ltd., , 2-11-15, Nakaochiai, Shinjyuku, Tokyo 161-0032, Japan
                [ 6 ] EVIDENT CORPORATION, , Shinjuku Monolith, 3-1 Nishi-Shinjuku 2-chome, Shinjuku-ku, Tokyo, Japan
                [ 7 ] Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), , Sapporo 062-8517, Japan
                [ 8 ] Biomedical Research Institute, AIST, , Ikeda 563-8577, Japan
                [ 9 ] Graduate School of Science, Hokkaido University, , Sapporo 060-0810, Japan
                [ 10 ] San'in Kaigan Geopark Museum of the Earth and Sea, , 1794-4, Makidani, Iwami-town, Tottori 681-0001, Japan
                [ 11 ] HATENOURUMA, , Hachioji, Tokyo 192-0023, Japan
                Author notes

                Electronic supplementary material is available online at https://doi.org/10.6084/m9.figshare.c.6470043.

                Author information
                http://orcid.org/0000-0001-8586-3320
                http://orcid.org/0000-0002-7388-464X
                https://orcid.org/0000-0002-6001-0679
                https://orcid.org/0000-0002-7747-6678
                http://orcid.org/0000-0002-7016-6466
                Article
                rsos230039
                10.1098/rsos.230039
                10049758
                b0bc1ea6-3113-4708-8fe3-437cb13bca8b
                © 2023 The Authors.

                Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/, which permits unrestricted use, provided the original author and source are credited.

                History
                : January 18, 2023
                : March 6, 2023
                Funding
                Funded by: Japan Society for the Promotion of Science, http://dx.doi.org/10.13039/501100001691;
                Award ID: 22K15165
                Award ID: JP18KK0199
                Award ID: JP19J00160
                Award ID: JPJSCCB20200009
                Funded by: Environmental Restoration and Conservation Agency of Japan;
                Award ID: JPMEERF20204R01
                Categories
                1001
                183
                14
                Organismal and Evolutionary Biology
                Research Articles

                bioluminescence,polychaeta,polycirrus aoandon sp. nov.,polycirrus ikeguchii sp. nov.,polycirrus onibi sp. nov.,terebelliformia

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