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      Identification of the Mitochondrial Heme Metabolism Complex

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          Abstract

          Heme is an essential cofactor for most organisms and all metazoans. While the individual enzymes involved in synthesis and utilization of heme are fairly well known, less is known about the intracellular trafficking of porphyrins and heme, or regulation of heme biosynthesis via protein complexes. To better understand this process we have undertaken a study of macromolecular assemblies associated with heme synthesis. Herein we have utilized mass spectrometry with coimmunoprecipitation of tagged enzymes of the heme biosynthetic pathway in a developing erythroid cell culture model to identify putative protein partners. The validity of these data obtained in the tagged protein system is confirmed by normal porphyrin/heme production by the engineered cells. Data obtained are consistent with the presence of a mitochondrial heme metabolism complex which minimally consists of ferrochelatase, protoporphyrinogen oxidase and aminolevulinic acid synthase-2. Additional proteins involved in iron and intermediary metabolism as well as mitochondrial transporters were identified as potential partners in this complex. The data are consistent with the known location of protein components and support a model of transient protein-protein interactions within a dynamic protein complex.

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          Most cited references56

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          Mitoferrin is essential for erythroid iron assimilation.

          Iron has a fundamental role in many metabolic processes, including electron transport, deoxyribonucleotide synthesis, oxygen transport and many essential redox reactions involving haemoproteins and Fe-S cluster proteins. Defective iron homeostasis results in either iron deficiency or iron overload. Precise regulation of iron transport in mitochondria is essential for haem biosynthesis, haemoglobin production and Fe-S cluster protein assembly during red cell development. Here we describe a zebrafish mutant, frascati (frs), that shows profound hypochromic anaemia and erythroid maturation arrest owing to defects in mitochondrial iron uptake. Through positional cloning, we show that the gene mutated in the frs mutant is a member of the vertebrate mitochondrial solute carrier family (SLC25) that we call mitoferrin (mfrn). mfrn is highly expressed in fetal and adult haematopoietic tissues of zebrafish and mouse. Erythroblasts generated from murine embryonic stem cells null for Mfrn (also known as Slc25a37) show maturation arrest with severely impaired incorporation of 55Fe into haem. Disruption of the yeast mfrn orthologues, MRS3 and MRS4, causes defects in iron metabolism and mitochondrial Fe-S cluster biogenesis. Murine Mfrn rescues the defects in frs zebrafish, and zebrafish mfrn complements the yeast mutant, indicating that the function of the gene may be highly conserved. Our data show that mfrn functions as the principal mitochondrial iron importer essential for haem biosynthesis in vertebrate erythroblasts.
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            Metabolon formation and metabolic channeling in the biosynthesis of plant natural products.

            Metabolon formation and metabolic channeling in plant secondary metabolism enable plants to effectively synthesize specific natural products and to avoid metabolic interference. Channeling can involve different cell types, take advantage of compartmentalization within the same cell or proceed directly within a metabolon. New experimental approaches document the importance of channeling in the synthesis of isoprenoids, alkaloids, phenylpropanoids, flavonoids and cyanogenic glucosides. Metabolon formation and metabolic channeling in natural-product synthesis facilitate attempts to genetically engineer new pathways into plants to improve their content of valuable natural products. They also offer the opportunity to introduce new traits by genetic engineering to produce plant cultivars that adhere to the principle of substantial equivalence.
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              MMS19 assembles iron-sulfur proteins required for DNA metabolism and genomic integrity.

              Instability of the nuclear genome is a hallmark of cancer and aging. MMS19 protein has been linked to maintenance of genomic integrity, but the molecular basis of this connection is unknown. Here, we identify MMS19 as a member of the cytosolic iron-sulfur protein assembly (CIA) machinery. MMS19 functions as part of the CIA targeting complex that specifically interacts with and facilitates iron-sulfur cluster insertion into apoproteins involved in methionine biosynthesis, DNA replication, DNA repair, and telomere maintenance. MMS19 thus serves as an adapter between early-acting CIA components and a subset of cellular iron-sulfur proteins. The function of MMS19 in the maturation of crucial components of DNA metabolism may explain the sensitivity of MMS19 mutants to DNA damage and the presence of extended telomeres.
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                Author and article information

                Contributors
                Role: Editor
                Journal
                PLoS One
                PLoS ONE
                plos
                plosone
                PLoS ONE
                Public Library of Science (San Francisco, CA USA )
                1932-6203
                19 August 2015
                2015
                : 10
                : 8
                : e0135896
                Affiliations
                [1 ]Biomedical and Health Sciences Institute, University of Georgia, Athens, Georgia, United States of America
                [2 ]Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, United States of America
                [3 ]Department of Microbiology, University of Georgia, Athens, Georgia, United States of America
                [4 ]GRU-UGA Medical Partnership, University of Georgia, Athens, Georgia, United States of America
                [5 ]Division of Hematology, Department of Medicine, University of Utah School of Medicine, Salt Lake City, Utah, United States of America
                [6 ]Department of Biological Chemistry and the Institute of Genomics and Proteomics, University of California Los Angeles, Los Angeles, California, United States of America
                Boston University School of Medicine, UNITED STATES
                Author notes

                Competing Interests: The authors have declared that no competing interests exist.

                Conceived and designed the experiments: AEM HAD JDP JAW. Performed the experiments: AEM MTS JDP JRM AAV. Analyzed the data: AEM HAD JDP JAW. Contributed reagents/materials/analysis tools: AEM HAD JDP JAW. Wrote the paper: AEM HAD JDP.

                [¤]

                Current address: Georgia Regents University, Medical College of Georgia, Augusta, Georgia, United States of America

                Article
                PONE-D-15-17868
                10.1371/journal.pone.0135896
                4545792
                26287972
                a9b1bdae-5cde-4630-abd3-84194d3013b1
                Copyright @ 2015

                This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

                History
                : 24 April 2015
                : 28 July 2015
                Page count
                Figures: 6, Tables: 2, Pages: 20
                Funding
                The research was supported by an American Heart Association ( http://www.heart.org) grant 12GRNT12080123 (to A.E.M.) and National Institutes of Health ( http://www.nih.gov) grants DK096051 (to H.A.D.), GM089778 (to J.A.W.), DK020503 and DK083909 (to J.D.P.). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.
                Categories
                Research Article
                Custom metadata
                The protein interactions from this publication have been submitted to the IMEx ( http://www.imexconsortium.org) consortium through IntAct and assigned the identifier IM-24072.

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