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      Boosting biodiversity monitoring using smartphone-driven, rapidly accumulating community-sourced data

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          Abstract

          Comprehensive biodiversity data is crucial for ecosystem protection. The Biome mobile app, launched in Japan, efficiently gathers species observations from the public using species identification algorithms and gamification elements. The app has amassed >6 million observations since 2019. Nonetheless, community-sourced data may exhibit spatial and taxonomic biases. Species distribution models (SDMs) estimate species distribution while accommodating such bias. Here, we investigated the quality of Biome data and its impact on SDM performance. Species identification accuracy exceeds 95% for birds, reptiles, mammals, and amphibians, but seed plants, molluscs, and fishes scored below 90%. Our SDMs for 132 terrestrial plants and animals across Japan revealed that incorporating Biome data into traditional survey data improved accuracy. For endangered species, traditional survey data required >2000 records for accurate models (Boyce index ≥ 0.9), while blending the two data sources reduced this to around 300. The uniform coverage of urban-natural gradients by Biome data, compared to traditional data biased towards natural areas, may explain this improvement. Combining multiple data sources better estimates species distributions, aiding in protected area designation and ecosystem service assessment. Establishing a platform for accumulating community-sourced distribution data will contribute to conserving and monitoring natural ecosystems.

          eLife digest

          The internet has allowed people to share their experiences through images, videos or audio recordings. This has led to the creation of online communities around a variety of topics, including biodiversity. In 2019, a smartphone app, called Biome, was created to fuel biodiversity engagement by making wildlife surveying an easy and fun activity via gamification and assisted species identification through image recognition and ecological analyses.

          These types of observations are essential for understanding biological communities and species habitats, and they can indicate where and when species occur. Across Japan, Biome has gathered over 6.5 million observations of different species. For biologists, this type of data is extremely useful because it is continuous and enables advanced statistical estimations of species distributions. The fact that the approach is enjoyable to the user also means more people are willing to participate, lowering the barriers to collecting data about biodiversity loss.

          However, questions remain regarding whether community-sourced data is robust enough for scientific purposes. To address this, Atsumi et al. investigated the quality of occurrence data collected in Biome. The researchers found that community identification of birds, reptiles, mammals and amphibians all exceeded 95% in accuracy. However, the accuracy fell for harder-to-judge seed plants, molluscs and fish species, ranging below 90%.

          Atsumi et al. also compared how estimated distributions of each species changed when only scientific data was used, versus when it was combined with community data. To perform this analysis, the scientists recognized variations in observation efforts across different locations and individuals and adjusted for these biases in their estimations. They found that adding community-sourced data significantly improved the accuracy of species distribution estimations, including endangered species.

          Atsumi et al. demonstrate that Biome data is useful when deciding which areas to designate as protected in terms of biodiversity. Additionally, these data can provide guidance for stakeholder-informed ecosystem service assessments. The element of rapid and reliable data collection can contribute to growing positive attitudes towards nature and biodiversity, The platform's community-driven nature also indicates an increase in biodiversity awareness and may link to crafting informative socio-environmental policy commitments.

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                Author and article information

                Contributors
                Role: Reviewing Editor
                Role: Senior Editor
                Journal
                eLife
                Elife
                eLife
                eLife
                eLife Sciences Publications, Ltd
                2050-084X
                20 June 2024
                2024
                : 13
                : RP93694
                Affiliations
                [1 ] Biome Inc Kyoto Japan
                [2 ] Department of Ocean Science, Hong Kong University of Science and Technology ( https://ror.org/00q4vv597) Kowloon Hong Kong
                [3 ] Hakubi Center, Kyoto University ( https://ror.org/02kpeqv85) Kyoto Japan
                [4 ] Center for Ecological Research, Kyoto University ( https://ror.org/02kpeqv85) Shiga Japan
                [5 ] Toyohashi Museum of Natural History Aichi Japan
                National Polytechnic School ( https://ror.org/01gb99w41) Ecuador
                University of Zurich ( https://ror.org/02crff812) Switzerland
                National Polytechnic School Ecuador
                Biome Inc. Kyoto Japan
                Biome Inc. Kyoto Japan
                Hong Kong University of Science and Technology Kowloon Hong Kong
                Toyohashi Museum of Natural History Toyohashi Japan
                Biome Inc. Kyoto Japan
                Biome Inc. Kyoto Japan
                Author information
                https://orcid.org/0000-0002-8206-4977
                https://orcid.org/0000-0003-4831-7181
                https://orcid.org/0000-0002-9778-9532
                Article
                93694
                10.7554/eLife.93694
                11189627
                38899444
                a76dded4-b024-4309-83ab-469fb3b2079f
                © 2024, Atsumi et al

                This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited.

                History
                : 24 October 2023
                Funding
                No external funding was received for this work.
                Categories
                Research Article
                Ecology
                Custom metadata
                Integrating an innovative community science platform with statistical modelling advances biodiversity monitoring and improves species habitat estimation across diverse taxa, supporting more effective conservation strategies.
                prc

                Life sciences
                seed plants,insects,birds,other
                Life sciences
                seed plants, insects, birds, other

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