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      METTL14 is required for exercise-induced cardiac hypertrophy and protects against myocardial ischemia-reperfusion injury

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          Abstract

          RNA m 6A modification is the most widely distributed RNA methylation and is closely related to various pathophysiological processes. Although the benefit of regular exercise on the heart has been well recognized, the role of RNA m 6A in exercise training and exercise-induced physiological cardiac hypertrophy remains largely unknown. Here, we show that endurance exercise training leads to reduced cardiac mRNA m 6A levels. METTL14 is downregulated by exercise, both at the level of RNA m 6A and at the protein level. In vivo, wild-type METTL14 overexpression, but not MTase inactive mutant METTL14, blocks exercise-induced physiological cardiac hypertrophy. Cardiac-specific METTL14 knockdown attenuates acute ischemia-reperfusion injury as well as cardiac dysfunction in ischemia-reperfusion remodeling. Mechanistically, silencing METTL14 suppresses Phlpp2 mRNA m 6A modifications and activates Akt-S473, in turn regulating cardiomyocyte growth and apoptosis. Our data indicates that METTL14 plays an important role in maintaining cardiac homeostasis. METTL14 downregulation represents a promising therapeutic strategy to attenuate cardiac remodeling.

          Abstract

          The benefit of regular exercise on the heart has been well documented but the role of RNA m 6A modification in exercise-induced cardiac remodelling remains largely unknown. In this study, the authors report that METTL14 plays an important role in RNA m 6A modification in exercise-induced physiological cardiac hypertrophy.

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          HISAT: a fast spliced aligner with low memory requirements.

          HISAT (hierarchical indexing for spliced alignment of transcripts) is a highly efficient system for aligning reads from RNA sequencing experiments. HISAT uses an indexing scheme based on the Burrows-Wheeler transform and the Ferragina-Manzini (FM) index, employing two types of indexes for alignment: a whole-genome FM index to anchor each alignment and numerous local FM indexes for very rapid extensions of these alignments. HISAT's hierarchical index for the human genome contains 48,000 local FM indexes, each representing a genomic region of ∼64,000 bp. Tests on real and simulated data sets showed that HISAT is the fastest system currently available, with equal or better accuracy than any other method. Despite its large number of indexes, HISAT requires only 4.3 gigabytes of memory. HISAT supports genomes of any size, including those larger than 4 billion bases.
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            Simple combinations of lineage-determining transcription factors prime cis-regulatory elements required for macrophage and B cell identities.

            Genome-scale studies have revealed extensive, cell type-specific colocalization of transcription factors, but the mechanisms underlying this phenomenon remain poorly understood. Here, we demonstrate in macrophages and B cells that collaborative interactions of the common factor PU.1 with small sets of macrophage- or B cell lineage-determining transcription factors establish cell-specific binding sites that are associated with the majority of promoter-distal H3K4me1-marked genomic regions. PU.1 binding initiates nucleosome remodeling, followed by H3K4 monomethylation at large numbers of genomic regions associated with both broadly and specifically expressed genes. These locations serve as beacons for additional factors, exemplified by liver X receptors, which drive both cell-specific gene expression and signal-dependent responses. Together with analyses of transcription factor binding and H3K4me1 patterns in other cell types, these studies suggest that simple combinations of lineage-determining transcription factors can specify the genomic sites ultimately responsible for both cell identity and cell type-specific responses to diverse signaling inputs. Copyright 2010 Elsevier Inc. All rights reserved.
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              2016 ESC Guidelines for the diagnosis and treatment of acute and chronic heart failure: The Task Force for the diagnosis and treatment of acute and chronic heart failure of the European Society of Cardiology (ESC)Developed with the special contribution of the Heart Failure Association (HFA) of the ESC.

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                Author and article information

                Contributors
                junjiexiao@shu.edu.cn
                Journal
                Nat Commun
                Nat Commun
                Nature Communications
                Nature Publishing Group UK (London )
                2041-1723
                9 November 2022
                9 November 2022
                2022
                : 13
                : 6762
                Affiliations
                [1 ]GRID grid.39436.3b, ISNI 0000 0001 2323 5732, Cardiac Regeneration and Ageing Lab, , Institute of Geriatrics (Shanghai University), Affiliated Nantong Hospital of Shanghai University (The Sixth People’s Hospital of Nantong), School of Medicine, Shanghai University, ; Nantong, 226011 China
                [2 ]GRID grid.39436.3b, ISNI 0000 0001 2323 5732, Institute of Cardiovascular Sciences, Shanghai Engineering Research Center of Organ Repair, School of Life Science, , Shanghai University, ; Shanghai, 200444 China
                [3 ]GRID grid.24516.34, ISNI 0000000123704535, Department of Cardiology, Shanghai Tongji hospital, , Tongji University School of Medicine, ; Shanghai, 200065 China
                [4 ]GRID grid.38142.3c, ISNI 000000041936754X, Cardiovascular Division of the Massachusetts General Hospital and Harvard Medical School, ; Boston, MA 02114 USA
                [5 ]GRID grid.7692.a, ISNI 0000000090126352, Department of Cardiology, Laboratory of Experimental Cardiology, , University Medical Center Utrecht, ; Utrecht, 3508GA The Netherlands
                [6 ]GRID grid.5477.1, ISNI 0000000120346234, Regenerative Medicine Center, Circulatory Health Laboratory, , University Medical Center Utrecht, University Utrecht, ; Utrecht, 3508GA The Netherlands
                Author information
                http://orcid.org/0000-0002-9202-0003
                Article
                34434
                10.1038/s41467-022-34434-y
                9646739
                36351918
                a4873858-5193-4f20-82e7-dc73a400ebf3
                © The Author(s) 2022

                Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

                History
                : 7 June 2021
                : 26 October 2022
                Funding
                Funded by: FundRef https://doi.org/10.13039/501100001809, National Natural Science Foundation of China (National Science Foundation of China);
                Award ID: 82270291 and 81800358
                Award ID: 82020108002 and 81911540486
                Award Recipient :
                Funded by: Natural Science Foundation of Shanghai (19ZR1474100 to LJ Wang)
                Funded by: National Key Research and Development Project (2018YFE0113500 to JJ Xiao) Innovation Program of Shanghai Municipal Education Commission (2017-01-07-00-09-E00042 to JJ Xiao) grant from Science and Technology Commission of Shanghai Municipality (21XD1421300 and 20DZ2255400 to JJ Xiao) The “Dawn” Program of Shanghai Education Commission (19SG34 to JJ Xiao)
                Categories
                Article
                Custom metadata
                © The Author(s) 2022

                Uncategorized
                rna modification,cardiovascular diseases,cardiovascular biology
                Uncategorized
                rna modification, cardiovascular diseases, cardiovascular biology

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